RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 FAM206AQ9NX38 181 aa9.64□□□□□ -0.87
CDHR3-205ENST00000468143 LRCH1Q9Y2L9 728 aa9.64□□□□□ -0.87
CDHR3-205ENST00000468143 POLR3KQ9Y2Y1 108 aaPredicted RBP9.64□□□□□ -0.87
CDHR3-205ENST00000468143 AUP1Q9Y679 476 aa9.64□□□□□ -0.87
CDHR3-205ENST00000468143 CUBNO60494 3623 aa9.63□□□□□ -0.87
CDHR3-205ENST00000468143 IGHV3OR16-10A0A075B7F0 116 aa9.63□□□□□ -0.87
CDHR3-205ENST00000468143 PPIAL4CA0A0B4J2A2 164 aa9.63□□□□□ -0.87
CDHR3-205ENST00000468143 SLC22A31A6NKX4 558 aa9.63□□□□□ -0.87
CDHR3-205ENST00000468143 A8MXK9 166 aa9.63□□□□□ -0.87
CDHR3-205ENST00000468143 LGALS8O00214 317 aa9.63□□□□□ -0.87
CDHR3-205ENST00000468143 EBAG9O00559 213 aa9.63□□□□□ -0.87
CDHR3-205ENST00000468143 CDIPTO14735 213 aa9.63□□□□□ -0.87
CDHR3-205ENST00000468143 GYPAP02724 150 aa9.63□□□□□ -0.87
CDHR3-205ENST00000468143 PITPNBP48739 271 aa9.63□□□□□ -0.87
CDHR3-205ENST00000468143 RIDAP52758 137 aaKnown RBP9.63□□□□□ -0.87
CDHR3-205ENST00000468143 GMFBP60983 142 aa9.63□□□□□ -0.87
CDHR3-205ENST00000468143 ELF3P78545 371 aaPredicted RBP9.63□□□□□ -0.87
CDHR3-205ENST00000468143 ROM1Q03395 351 aa9.63□□□□□ -0.87
CDHR3-205ENST00000468143 MFGE8Q08431 387 aaPredicted RBP9.63□□□□□ -0.87
CDHR3-205ENST00000468143 MZT1Q08AG7 82 aa9.63□□□□□ -0.87
CDHR3-205ENST00000468143 DEGS2Q6QHC5 323 aa9.63□□□□□ -0.87
CDHR3-205ENST00000468143 ZNF322Q6U7Q0 402 aaPredicted RBP9.63□□□□□ -0.87
CDHR3-205ENST00000468143 ZNF841Q6ZN19 808 aa9.63□□□□□ -0.87
CDHR3-205ENST00000468143 DCDC5Q6ZRR9 648 aa9.63□□□□□ -0.87
CDHR3-205ENST00000468143 KCTD8Q6ZWB6 473 aa9.63□□□□□ -0.87
CDHR3-205ENST00000468143 NLRC3Q7RTR2 1065 aa9.63□□□□□ -0.87
CDHR3-205ENST00000468143 COMMD2Q86X83 199 aa9.63□□□□□ -0.87
CDHR3-205ENST00000468143 ZNF679Q8IYX0 411 aa9.63□□□□□ -0.87
CDHR3-205ENST00000468143 CSNK2A3Q8NEV1 391 aa9.63□□□□□ -0.87
CDHR3-205ENST00000468143 OR51E1Q8TCB6 317 aa9.63□□□□□ -0.87
CDHR3-205ENST00000468143 LRRC29Q8WV35 223 aa9.63□□□□□ -0.87
CDHR3-205ENST00000468143 ASB17Q8WXJ9 295 aa9.63□□□□□ -0.87
CDHR3-205ENST00000468143 RPL3LQ92901 407 aaKnown RBP9.63□□□□□ -0.87
CDHR3-205ENST00000468143 SEH1LQ96EE3 360 aa9.63□□□□□ -0.87
CDHR3-205ENST00000468143 FAM71F1Q96KD3 344 aaPredicted RBP9.63□□□□□ -0.87
CDHR3-205ENST00000468143 MICU1Q9BPX6 476 aa9.63□□□□□ -0.87
CDHR3-205ENST00000468143 RBM4BQ9BQ04 359 aaKnown RBP9.63□□□□□ -0.87
CDHR3-205ENST00000468143 MRI1Q9BV20 369 aa9.63□□□□□ -0.87
CDHR3-205ENST00000468143 GABARAPL3Q9BY60 117 aa9.63□□□□□ -0.87
CDHR3-205ENST00000468143 FGF23Q9GZV9 251 aaPredicted RBP9.63□□□□□ -0.87
CDHR3-205ENST00000468143 CTSZQ9UBR2 303 aa9.63□□□□□ -0.87
CDHR3-205ENST00000468143 CLN8Q9UBY8 286 aa9.63□□□□□ -0.87
CDHR3-205ENST00000468143 ENOPH1Q9UHY7 261 aa9.63□□□□□ -0.87
CDHR3-205ENST00000468143 GTF2A1LQ9UNN4 478 aa9.63□□□□□ -0.87
CDHR3-205ENST00000468143 TMEM14AQ9Y6G1 99 aa9.63□□□□□ -0.87
CDHR3-205ENST00000468143 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.62□□□□□ -0.87
CDHR3-205ENST00000468143 OOEPA6NGQ2 149 aa9.62□□□□□ -0.87
CDHR3-205ENST00000468143 ANXA2P2A6NMY6 339 aa9.62□□□□□ -0.87
CDHR3-205ENST00000468143 ZNF670-ZNF695F2Z2N8 137 aa9.62□□□□□ -0.87
CDHR3-205ENST00000468143 EI24O14681 340 aa9.62□□□□□ -0.87
CDHR3-205ENST00000468143 ADAM20O43506 726 aa9.62□□□□□ -0.87
CDHR3-205ENST00000468143 ZNF254O75437 659 aa9.62□□□□□ -0.87
CDHR3-205ENST00000468143 FSTL3O95633 263 aa9.62□□□□□ -0.87
CDHR3-205ENST00000468143 CST4P01036 141 aa9.62□□□□□ -0.87
CDHR3-205ENST00000468143 LHBP01229 141 aa9.62□□□□□ -0.87
CDHR3-205ENST00000468143 IL5RAQ01344 420 aa9.62□□□□□ -0.87
CDHR3-205ENST00000468143 PAX2Q02962 417 aa9.62□□□□□ -0.87
CDHR3-205ENST00000468143 KLF17Q5JT82 389 aaPredicted RBP9.62□□□□□ -0.87
CDHR3-205ENST00000468143 WDR25Q64LD2 544 aaPredicted RBP9.62□□□□□ -0.87
CDHR3-205ENST00000468143 BTNL3Q6UXE8 466 aa9.62□□□□□ -0.87
CDHR3-205ENST00000468143 SSX6Q7RTT6 188 aa9.62□□□□□ -0.87
CDHR3-205ENST00000468143 FAM90A1Q86YD7 464 aa9.62□□□□□ -0.87
CDHR3-205ENST00000468143 GID4Q8IVV7 300 aa9.62□□□□□ -0.87
CDHR3-205ENST00000468143 GALNT4Q8N4A0 578 aa9.62□□□□□ -0.87
CDHR3-205ENST00000468143 TEX29Q8N6K0 151 aa9.62□□□□□ -0.87
CDHR3-205ENST00000468143 FAM81AQ8TBF8 368 aa9.62□□□□□ -0.87
CDHR3-205ENST00000468143 ZNF418Q8TF45 676 aaPredicted RBP9.62□□□□□ -0.87
CDHR3-205ENST00000468143 RAB40AQ8WXH6 277 aa9.62□□□□□ -0.87
CDHR3-205ENST00000468143 OR5P3Q8WZ94 311 aa9.62□□□□□ -0.87
CDHR3-205ENST00000468143 ITPKCQ96DU7 683 aa9.62□□□□□ -0.87
CDHR3-205ENST00000468143 RNF170Q96K19 258 aa9.62□□□□□ -0.87
CDHR3-205ENST00000468143 TECTBQ96PL2 329 aa9.62□□□□□ -0.87
CDHR3-205ENST00000468143 SLC6A7Q99884 636 aa9.62□□□□□ -0.87
CDHR3-205ENST00000468143 RTL8AQ9BWD3 113 aa9.62□□□□□ -0.87
CDHR3-205ENST00000468143 GPR84Q9NQS5 396 aa9.62□□□□□ -0.87
CDHR3-205ENST00000468143 CLN6Q9NWW5 311 aa9.62□□□□□ -0.87
CDHR3-205ENST00000468143 HAO2Q9NYQ3 351 aa9.62□□□□□ -0.87
CDHR3-205ENST00000468143 MRM2Q9UI43 246 aaKnown RBP9.62□□□□□ -0.87
CDHR3-205ENST00000468143 MPC1Q9Y5U8 109 aa9.62□□□□□ -0.87
CDHR3-205ENST00000468143 FBN1P35555 2871 aaKnown RBP9.61□□□□□ -0.87
CDHR3-205ENST00000468143 SVEP1Q4LDE5 3571 aa9.61□□□□□ -0.87
CDHR3-205ENST00000468143 TRAV38-1A0A0B4J264 116 aa9.61□□□□□ -0.87
CDHR3-205ENST00000468143 IGHV2-70DA0A0C4DH43 119 aa9.61□□□□□ -0.87
CDHR3-205ENST00000468143 A0A1B0GW55 424 aa9.61□□□□□ -0.87
CDHR3-205ENST00000468143 A0A1W2PQL4 384 aaPredicted RBP9.61□□□□□ -0.87
CDHR3-205ENST00000468143 ACOD1A6NK06 481 aa9.61□□□□□ -0.87
CDHR3-205ENST00000468143 LOC110117498-PIK3R3F6TDL0 507 aa9.61□□□□□ -0.87
CDHR3-205ENST00000468143 TNFRSF13BO14836 293 aaPredicted RBP9.61□□□□□ -0.87
CDHR3-205ENST00000468143 SRSF10O75494 262 aaKnown RBP9.61□□□□□ -0.87
CDHR3-205ENST00000468143 RPP14O95059 124 aaKnown RBP9.61□□□□□ -0.87
CDHR3-205ENST00000468143 FSHBP01225 129 aa9.61□□□□□ -0.87
CDHR3-205ENST00000468143 TTRP02766 147 aa9.61□□□□□ -0.87
CDHR3-205ENST00000468143 ALPLP05186 524 aa9.61□□□□□ -0.87
CDHR3-205ENST00000468143 DUX4L2P0CJ85 424 aa9.61□□□□□ -0.87
CDHR3-205ENST00000468143 DUX4L3P0CJ86 424 aa9.61□□□□□ -0.87
CDHR3-205ENST00000468143 DUX4L4P0CJ87 422 aa9.61□□□□□ -0.87
CDHR3-205ENST00000468143 DUX4L5P0CJ88 424 aa9.61□□□□□ -0.87
CDHR3-205ENST00000468143 DUX4L6P0CJ89 424 aa9.61□□□□□ -0.87
CDHR3-205ENST00000468143 DUX4L7P0CJ90 424 aa9.61□□□□□ -0.87
CDHR3-205ENST00000468143 HTR1FP30939 366 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms