RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 MOB3CQ70IA8 216 aa4.49□□□□□ -1.69
PTCD3-207ENST00000467273 RPS27LQ71UM5 84 aaKnown RBP4.49□□□□□ -1.69
PTCD3-207ENST00000467273 RRM2BQ7LG56 351 aa4.49□□□□□ -1.69
PTCD3-207ENST00000467273 DPPA2Q7Z7J5 298 aa4.49□□□□□ -1.69
PTCD3-207ENST00000467273 CENPVQ7Z7K6 275 aaPredicted RBP4.49□□□□□ -1.69
PTCD3-207ENST00000467273 LRRC28Q86X40 367 aaPredicted RBP4.49□□□□□ -1.69
PTCD3-207ENST00000467273 CADM3Q8N126 398 aa4.49□□□□□ -1.69
PTCD3-207ENST00000467273 MUC20Q8N307 709 aaPredicted RBP4.49□□□□□ -1.69
PTCD3-207ENST00000467273 ZNF781Q8N8C0 355 aa4.49□□□□□ -1.69
PTCD3-207ENST00000467273 NOA1Q8NC60 698 aaKnown RBP4.49□□□□□ -1.69
PTCD3-207ENST00000467273 ZNF680Q8NEM1 530 aa4.49□□□□□ -1.69
PTCD3-207ENST00000467273 TMEM185AQ8NFB2 350 aa4.49□□□□□ -1.69
PTCD3-207ENST00000467273 TSPAN14Q8NG11 270 aa4.49□□□□□ -1.69
PTCD3-207ENST00000467273 OR52B4Q8NGK2 314 aa4.49□□□□□ -1.69
PTCD3-207ENST00000467273 NDNFQ8TB73 568 aa4.49□□□□□ -1.69
PTCD3-207ENST00000467273 OR5P2Q8WZ92 322 aa4.49□□□□□ -1.69
PTCD3-207ENST00000467273 PHF21AQ96BD5 680 aa4.49□□□□□ -1.69
PTCD3-207ENST00000467273 SPDL1Q96EA4 605 aa4.49□□□□□ -1.69
PTCD3-207ENST00000467273 L3HYPDHQ96EM0 354 aa4.49□□□□□ -1.69
PTCD3-207ENST00000467273 OTUB1Q96FW1 271 aaPredicted RBP4.49□□□□□ -1.69
PTCD3-207ENST00000467273 MED30Q96HR3 178 aa4.49□□□□□ -1.69
PTCD3-207ENST00000467273 PLEKHA8Q96JA3 519 aa4.49□□□□□ -1.69
PTCD3-207ENST00000467273 EGLN2Q96KS0 407 aa4.49□□□□□ -1.69
PTCD3-207ENST00000467273 FCRL1Q96LA6 429 aa4.49□□□□□ -1.69
PTCD3-207ENST00000467273 OR7D2Q96RA2 312 aa4.49□□□□□ -1.69
PTCD3-207ENST00000467273 SLC29A1Q99808 456 aa4.49□□□□□ -1.69
PTCD3-207ENST00000467273 DNTTIP1Q9H147 329 aa4.49□□□□□ -1.69
PTCD3-207ENST00000467273 RGCCQ9H4X1 137 aa4.49□□□□□ -1.69
PTCD3-207ENST00000467273 NANOGQ9H9S0 305 aa4.49□□□□□ -1.69
PTCD3-207ENST00000467273 NEK6Q9HC98 313 aa4.49□□□□□ -1.69
PTCD3-207ENST00000467273 B3GAT2Q9NPZ5 323 aa4.49□□□□□ -1.69
PTCD3-207ENST00000467273 EXD2Q9NVH0 621 aa4.49□□□□□ -1.69
PTCD3-207ENST00000467273 POLR3HQ9Y535 204 aaPredicted RBP4.49□□□□□ -1.69
PTCD3-207ENST00000467273 EPPK1P58107 5090 aaKnown RBP4.48□□□□□ -1.69
PTCD3-207ENST00000467273 NOTCH3Q9UM47 2321 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 IGHV2-70DA0A0C4DH43 119 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 KIR2DS1A0A191URI9 304 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 C13orf42A0A1B0GVH6 325 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 MDFIC2A0A1B0GVS7 189 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 PLSCR5A0PG75 271 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 TMEM72A0PK05 275 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 A8MVM7 634 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 H3BSA7 217 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 IFNL4K9M1U5 179 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 FCMRO60667 390 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 HLA-HP01893 362 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 TFPTP0C1Z6 253 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 G6PDP11413 515 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 CD79AP11912 226 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 CXCR1P25024 350 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 UCP1P25874 307 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 TGFBR2P37173 567 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 HPCAL1P37235 193 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 MDH2P40926 338 aaKnown RBP4.48□□□□□ -1.69
PTCD3-207ENST00000467273 SLC1A6P48664 564 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 SLC7A2P52569 658 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 CLDN17P56750 224 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 BTG1P62324 171 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 S100A12P80511 92 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 CAV1Q03135 178 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 EMX1Q04741 257 aaPredicted RBP4.48□□□□□ -1.69
PTCD3-207ENST00000467273 PMS2P3Q13401 168 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 OR7A5Q15622 319 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 SSX2Q16385 188 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 UNC50Q53HI1 259 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 TMEM268Q5VZI3 342 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 NCR3LG1Q68D85 454 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 FRRS1Q6ZNA5 592 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 Q6ZSV7 163 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 PRSS45Q7RTY3 260 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 C16orf62Q7Z3J2 963 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 RNF130Q86XS8 419 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 PTOV1Q86YD1 416 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 FOXRED2Q8IWF2 684 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 ZNF440Q8IYI8 595 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 TMEM123Q8N131 208 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 ZNF283Q8N7M2 679 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 OR8J2Q8NGG1 315 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 OR1J2Q8NGS2 313 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 MFSD8Q8NHS3 518 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 VANGL1Q8TAA9 524 aaPredicted RBP4.48□□□□□ -1.69
PTCD3-207ENST00000467273 TEX47Q8TBZ9 253 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 ZNF596Q8TC21 504 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 DDB2Q92466 427 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 HAVCR1Q96D42 359 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 DNAJA3Q96EY1 480 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 RRNAD1Q96FB5 475 aaKnown RBP4.48□□□□□ -1.69
PTCD3-207ENST00000467273 OXGR1Q96P68 337 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 B9D2Q9BPU9 175 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 IFT27Q9BW83 186 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 KRTAP2-2Q9BYT5 123 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 SLC19A3Q9BZV2 496 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 TRIM15Q9C019 465 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 DPAGT1Q9H3H5 408 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 MAN2C1Q9NTJ4 1040 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 C20orf141Q9NUB4 165 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 C1orf109Q9NX04 203 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 OR6C3Q9NZP0 311 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 UBQLN2Q9UHD9 624 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 HAO1Q9UJM8 370 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms