RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 APOBEC3DQ96AK3 386 aaPredicted RBP4.59□□□□□ -1.67
NCL-208ENST00000466274 C12orf43Q96C57 262 aaKnown RBP4.59□□□□□ -1.67
NCL-208ENST00000466274 DUS3LQ96G46 650 aaKnown RBP4.59□□□□□ -1.67
NCL-208ENST00000466274 MED30Q96HR3 178 aa4.59□□□□□ -1.67
NCL-208ENST00000466274 TEX37Q96LM6 180 aa4.59□□□□□ -1.67
NCL-208ENST00000466274 MOGAT1Q96PD6 335 aa4.59□□□□□ -1.67
NCL-208ENST00000466274 RBP7Q96R05 134 aa4.59□□□□□ -1.67
NCL-208ENST00000466274 CCL13Q99616 98 aa4.59□□□□□ -1.67
NCL-208ENST00000466274 TMEM43Q9BTV4 400 aa4.59□□□□□ -1.67
NCL-208ENST00000466274 MRPL13Q9BYD1 178 aaKnown RBP4.59□□□□□ -1.67
NCL-208ENST00000466274 TMEM27Q9HBJ8 222 aa4.59□□□□□ -1.67
NCL-208ENST00000466274 C1orf123Q9NWV4 160 aa4.59□□□□□ -1.67
NCL-208ENST00000466274 VNN3Q9NY84 501 aa4.59□□□□□ -1.67
NCL-208ENST00000466274 PTTG3PQ9NZH4 202 aa4.59□□□□□ -1.67
NCL-208ENST00000466274 TBL2Q9Y4P3 447 aaKnown RBP4.59□□□□□ -1.67
NCL-208ENST00000466274 PLECQ15149 4684 aaKnown RBP4.58□□□□□ -1.68
NCL-208ENST00000466274 A0A0G2JPF8 293 aa4.58□□□□□ -1.68
NCL-208ENST00000466274 A6NLC8 198 aa4.58□□□□□ -1.68
NCL-208ENST00000466274 HNRNPCL2B2RXH8 293 aa4.58□□□□□ -1.68
NCL-208ENST00000466274 HNRNPCL3B7ZW38 293 aa4.58□□□□□ -1.68
NCL-208ENST00000466274 SGCEO43556 437 aa4.58□□□□□ -1.68
NCL-208ENST00000466274 GMDSO60547 372 aa4.58□□□□□ -1.68
NCL-208ENST00000466274 FMO6PO60774 539 aa4.58□□□□□ -1.68
NCL-208ENST00000466274 HNRNPCL1O60812 293 aaKnown RBP4.58□□□□□ -1.68
NCL-208ENST00000466274 PEX11AO75192 247 aa4.58□□□□□ -1.68
NCL-208ENST00000466274 TRMUO75648 421 aaKnown RBP4.58□□□□□ -1.68
NCL-208ENST00000466274 RHBDL1O75783 438 aa4.58□□□□□ -1.68
NCL-208ENST00000466274 SNRPAP09012 282 aaKnown RBP4.58□□□□□ -1.68
NCL-208ENST00000466274 HNRNPCL4P0DMR1 293 aa4.58□□□□□ -1.68
NCL-208ENST00000466274 MSR1P21757 451 aa4.58□□□□□ -1.68
NCL-208ENST00000466274 PAX6P26367 422 aa4.58□□□□□ -1.68
NCL-208ENST00000466274 CNTFRP26992 372 aa4.58□□□□□ -1.68
NCL-208ENST00000466274 OR12D2P58182 307 aa4.58□□□□□ -1.68
NCL-208ENST00000466274 KRTAP10-7P60409 375 aaPredicted RBP4.58□□□□□ -1.68
NCL-208ENST00000466274 SLC35B1P78383 322 aa4.58□□□□□ -1.68
NCL-208ENST00000466274 HOXC5Q00444 222 aa4.58□□□□□ -1.68
NCL-208ENST00000466274 CD47Q08722 323 aa4.58□□□□□ -1.68
NCL-208ENST00000466274 MAD2L1Q13257 205 aaPredicted RBP4.58□□□□□ -1.68
NCL-208ENST00000466274 OR4F3Q6IEY1 312 aa4.58□□□□□ -1.68
NCL-208ENST00000466274 HCP5Q6MZN7 132 aa4.58□□□□□ -1.68
NCL-208ENST00000466274 LINC00336Q6ZUF6 198 aa4.58□□□□□ -1.68
NCL-208ENST00000466274 CPLX4Q7Z7G2 160 aa4.58□□□□□ -1.68
NCL-208ENST00000466274 DHDDSQ86SQ9 333 aa4.58□□□□□ -1.68
NCL-208ENST00000466274 SGPP2Q8IWX5 399 aa4.58□□□□□ -1.68
NCL-208ENST00000466274 RIMKLAQ8IXN7 391 aa4.58□□□□□ -1.68
NCL-208ENST00000466274 CNPY4Q8N129 248 aa4.58□□□□□ -1.68
NCL-208ENST00000466274 KRTCAP2Q8N6L1 136 aa4.58□□□□□ -1.68
NCL-208ENST00000466274 OR8J2Q8NGG1 315 aa4.58□□□□□ -1.68
NCL-208ENST00000466274 OR4Q3Q8NH05 313 aa4.58□□□□□ -1.68
NCL-208ENST00000466274 SPRYD4Q8WW59 207 aaPredicted RBP4.58□□□□□ -1.68
NCL-208ENST00000466274 ST6GALNAC6Q969X2 333 aa4.58□□□□□ -1.68
NCL-208ENST00000466274 CDRT15Q96T59 188 aa4.58□□□□□ -1.68
NCL-208ENST00000466274 SEPHS2Q99611 448 aa4.58□□□□□ -1.68
NCL-208ENST00000466274 ST6GALNAC5Q9BVH7 336 aa4.58□□□□□ -1.68
NCL-208ENST00000466274 KRTAP2-2Q9BYT5 123 aa4.58□□□□□ -1.68
NCL-208ENST00000466274 DCLRE1BQ9H816 532 aa4.58□□□□□ -1.68
NCL-208ENST00000466274 THUMPD1Q9NXG2 353 aaKnown RBP4.58□□□□□ -1.68
NCL-208ENST00000466274 TAS2R5Q9NYW4 299 aa4.58□□□□□ -1.68
NCL-208ENST00000466274 TMEM216Q9P0N5 145 aa4.58□□□□□ -1.68
NCL-208ENST00000466274 FIS1Q9Y3D6 152 aa4.58□□□□□ -1.68
NCL-208ENST00000466274 TANC2Q9HCD6 1990 aa4.58□□□□□ -1.68
NCL-208ENST00000466274 HECTD4Q9Y4D8 3996 aa4.57□□□□□ -1.68
NCL-208ENST00000466274 IGHV3OR15-7A0A075B7D8 119 aa4.57□□□□□ -1.68
NCL-208ENST00000466274 NUPR2A6NF83 97 aa4.57□□□□□ -1.68
NCL-208ENST00000466274 FAM90A8PA6NJQ4 464 aa4.57□□□□□ -1.68
NCL-208ENST00000466274 A8MZ25 164 aa4.57□□□□□ -1.68
NCL-208ENST00000466274 M0QZK8 103 aa4.57□□□□□ -1.68
NCL-208ENST00000466274 FCN3O75636 299 aa4.57□□□□□ -1.68
NCL-208ENST00000466274 SLC2A10O95528 541 aa4.57□□□□□ -1.68
NCL-208ENST00000466274 KRT75O95678 551 aa4.57□□□□□ -1.68
NCL-208ENST00000466274 PTBP3O95758 552 aaKnown RBP4.57□□□□□ -1.68
NCL-208ENST00000466274 PGA5P0DJD9 388 aa4.57□□□□□ -1.68
NCL-208ENST00000466274 IGHV4-30-4P0DP06 118 aa4.57□□□□□ -1.68
NCL-208ENST00000466274 UMPSP11172 480 aa4.57□□□□□ -1.68
NCL-208ENST00000466274 GP9P14770 177 aa4.57□□□□□ -1.68
NCL-208ENST00000466274 ETS2P15036 469 aa4.57□□□□□ -1.68
NCL-208ENST00000466274 TCP1P17987 556 aaKnown RBP4.57□□□□□ -1.68
NCL-208ENST00000466274 GCAP28676 217 aa4.57□□□□□ -1.68
NCL-208ENST00000466274 PRKAR1BP31321 381 aa4.57□□□□□ -1.68
NCL-208ENST00000466274 NAA10P41227 235 aaPredicted RBP4.57□□□□□ -1.68
NCL-208ENST00000466274 OR3A4PP47883 348 aa4.57□□□□□ -1.68
NCL-208ENST00000466274 TGM4P49221 684 aa4.57□□□□□ -1.68
NCL-208ENST00000466274 PLTPP55058 493 aa4.57□□□□□ -1.68
NCL-208ENST00000466274 CLDN8P56748 225 aa4.57□□□□□ -1.68
NCL-208ENST00000466274 DNAJB13P59910 316 aa4.57□□□□□ -1.68
NCL-208ENST00000466274 KIR2DS1Q14954 304 aa4.57□□□□□ -1.68
NCL-208ENST00000466274 SEC23BQ15437 767 aa4.57□□□□□ -1.68
NCL-208ENST00000466274 SSX2Q16385 188 aa4.57□□□□□ -1.68
NCL-208ENST00000466274 ABCA11PQ4W5N1 156 aa4.57□□□□□ -1.68
NCL-208ENST00000466274 WDR38Q5JTN6 314 aa4.57□□□□□ -1.68
NCL-208ENST00000466274 PXDC1Q5TGL8 231 aa4.57□□□□□ -1.68
NCL-208ENST00000466274 RANBP3LQ86VV4 465 aaPredicted RBP4.57□□□□□ -1.68
NCL-208ENST00000466274 C10orf107Q8IVU9 208 aa4.57□□□□□ -1.68
NCL-208ENST00000466274 MKXQ8IYA7 352 aa4.57□□□□□ -1.68
NCL-208ENST00000466274 GCSAMQ8N6F7 178 aa4.57□□□□□ -1.68
NCL-208ENST00000466274 FAM216BQ8N7L0 139 aa4.57□□□□□ -1.68
NCL-208ENST00000466274 CHPT1Q8WUD6 406 aa4.57□□□□□ -1.68
NCL-208ENST00000466274 EME1Q96AY2 570 aa4.57□□□□□ -1.68
NCL-208ENST00000466274 ITCHQ96J02 903 aa4.57□□□□□ -1.68
NCL-208ENST00000466274 RITA1Q96K30 269 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms