RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 GABARAPL1Q9H0R8 117 aa18.13■□□□□ 0.49
LIME1-203ENST00000465591 C14orf119Q9NWQ9 140 aa18.13■□□□□ 0.49
LIME1-203ENST00000465591 CLN8Q9UBY8 286 aa18.13■□□□□ 0.49
LIME1-203ENST00000465591 LAMP5Q9UJQ1 280 aa18.13■□□□□ 0.49
LIME1-203ENST00000465591 ZAR1LA6NP61 321 aa18.12■□□□□ 0.49
LIME1-203ENST00000465591 IGHV4-38-2P0DP08 117 aa18.12■□□□□ 0.49
LIME1-203ENST00000465591 CFL1P23528 166 aaKnown RBP18.12■□□□□ 0.49
LIME1-203ENST00000465591 ELF3P78545 371 aaPredicted RBP18.12■□□□□ 0.49
LIME1-203ENST00000465591 POU4F2Q12837 409 aa18.12■□□□□ 0.49
LIME1-203ENST00000465591 ZSCAN26Q16670 478 aa18.12■□□□□ 0.49
LIME1-203ENST00000465591 KRT77Q7Z794 578 aa18.12■□□□□ 0.49
LIME1-203ENST00000465591 FAM90A1Q86YD7 464 aa18.12■□□□□ 0.49
LIME1-203ENST00000465591 OR1M1Q8NGA1 313 aa18.12■□□□□ 0.49
LIME1-203ENST00000465591 ZFAND2BQ8WV99 257 aa18.12■□□□□ 0.49
LIME1-203ENST00000465591 PAPOLGQ9BWT3 736 aaKnown RBP18.12■□□□□ 0.49
LIME1-203ENST00000465591 SUCNR1Q9BXA5 334 aa18.12■□□□□ 0.49
LIME1-203ENST00000465591 RGCCQ9H4X1 137 aa18.12■□□□□ 0.49
LIME1-203ENST00000465591 SMURF1Q9HCE7 757 aa18.12■□□□□ 0.49
LIME1-203ENST00000465591 NUP50Q9UKX7 468 aa18.12■□□□□ 0.49
LIME1-203ENST00000465591 SOX21Q9Y651 276 aaPredicted RBP18.12■□□□□ 0.49
LIME1-203ENST00000465591 IGHV3OR15-7A0A075B7D8 119 aa18.11■□□□□ 0.49
LIME1-203ENST00000465591 IGHV3OR16-10A0A075B7F0 116 aa18.11■□□□□ 0.49
LIME1-203ENST00000465591 KIR2DS1A0A191URI9 304 aa18.11■□□□□ 0.49
LIME1-203ENST00000465591 hCG_1807616A0A1W2PRN6 198 aa18.11■□□□□ 0.49
LIME1-203ENST00000465591 OOEPA6NGQ2 149 aa18.11■□□□□ 0.49
LIME1-203ENST00000465591 PHYHO14832 338 aa18.11■□□□□ 0.49
LIME1-203ENST00000465591 GYPAP02724 150 aa18.11■□□□□ 0.49
LIME1-203ENST00000465591 AADACL4Q5VUY2 407 aa18.11■□□□□ 0.49
LIME1-203ENST00000465591 C12orf73Q69YU5 71 aa18.11■□□□□ 0.49
LIME1-203ENST00000465591 C10orf67Q8IYJ2 551 aa18.11■□□□□ 0.49
LIME1-203ENST00000465591 TCEANCQ8N8B7 351 aa18.11■□□□□ 0.49
LIME1-203ENST00000465591 ITPKCQ96DU7 683 aa18.11■□□□□ 0.49
LIME1-203ENST00000465591 ZNF48Q96MX3 618 aaPredicted RBP18.11■□□□□ 0.49
LIME1-203ENST00000465591 NUDT16L1Q9BRJ7 211 aaKnown RBP18.11■□□□□ 0.49
LIME1-203ENST00000465591 RASSF4Q9H2L5 321 aa18.11■□□□□ 0.49
LIME1-203ENST00000465591 FAM206AQ9NX38 181 aa18.11■□□□□ 0.49
LIME1-203ENST00000465591 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.1■□□□□ 0.49
LIME1-203ENST00000465591 ADAM20O43506 726 aa18.1■□□□□ 0.49
LIME1-203ENST00000465591 POLR2IP36954 125 aaKnown RBP18.1■□□□□ 0.49
LIME1-203ENST00000465591 MZT1Q08AG7 82 aa18.1■□□□□ 0.49
LIME1-203ENST00000465591 LCN1P1Q5VSP4 162 aa18.1■□□□□ 0.49
LIME1-203ENST00000465591 BTNL3Q6UXE8 466 aa18.1■□□□□ 0.49
LIME1-203ENST00000465591 WDR82Q6UXN9 313 aa18.1■□□□□ 0.49
LIME1-203ENST00000465591 ZDHHC13Q8IUH4 622 aa18.1■□□□□ 0.49
LIME1-203ENST00000465591 SIGLECL1Q8N7X8 197 aa18.1■□□□□ 0.49
LIME1-203ENST00000465591 CSNK2A3Q8NEV1 391 aa18.1■□□□□ 0.49
LIME1-203ENST00000465591 LRRC29Q8WV35 223 aa18.1■□□□□ 0.49
LIME1-203ENST00000465591 UPRTQ96BW1 309 aa18.1■□□□□ 0.49
LIME1-203ENST00000465591 SEH1LQ96EE3 360 aa18.1■□□□□ 0.49
LIME1-203ENST00000465591 CIB1Q99828 191 aa18.1■□□□□ 0.49
LIME1-203ENST00000465591 SEMA6AQ9H2E6 1030 aa18.1■□□□□ 0.49
LIME1-203ENST00000465591 NIPAL2Q9H841 368 aa18.1■□□□□ 0.49
LIME1-203ENST00000465591 TRAV38-1A0A0B4J264 116 aa18.09■□□□□ 0.49
LIME1-203ENST00000465591 A0A1B0GW55 424 aa18.09■□□□□ 0.49
LIME1-203ENST00000465591 ZNF850A8MQ14 1090 aa18.09■□□□□ 0.49
LIME1-203ENST00000465591 DUX4L2P0CJ85 424 aa18.09■□□□□ 0.49
LIME1-203ENST00000465591 DUX4L3P0CJ86 424 aa18.09■□□□□ 0.49
LIME1-203ENST00000465591 DUX4L4P0CJ87 422 aa18.09■□□□□ 0.49
LIME1-203ENST00000465591 DUX4L5P0CJ88 424 aa18.09■□□□□ 0.49
LIME1-203ENST00000465591 DUX4L6P0CJ89 424 aa18.09■□□□□ 0.49
LIME1-203ENST00000465591 DUX4L7P0CJ90 424 aa18.09■□□□□ 0.49
LIME1-203ENST00000465591 FPR2P25090 351 aa18.09■□□□□ 0.49
LIME1-203ENST00000465591 PRDX4Q13162 271 aa18.09■□□□□ 0.49
LIME1-203ENST00000465591 TEX36Q5VZQ5 186 aa18.09■□□□□ 0.49
LIME1-203ENST00000465591 DUX4L9Q6RFH8 374 aaPredicted RBP18.09■□□□□ 0.49
LIME1-203ENST00000465591 MEPCEQ7L2J0 689 aaKnown RBP18.09■□□□□ 0.49
LIME1-203ENST00000465591 FGFRL1Q8N441 504 aa18.09■□□□□ 0.49
LIME1-203ENST00000465591 TMEM163Q8TC26 289 aa18.09■□□□□ 0.49
LIME1-203ENST00000465591 HPSE2Q8WWQ2 592 aa18.09■□□□□ 0.49
LIME1-203ENST00000465591 PPP1R14AQ96A00 147 aa18.09■□□□□ 0.49
LIME1-203ENST00000465591 TECTBQ96PL2 329 aa18.09■□□□□ 0.49
LIME1-203ENST00000465591 OR8B4Q96RC9 309 aa18.09■□□□□ 0.49
LIME1-203ENST00000465591 IL4I1Q96RQ9 567 aa18.09■□□□□ 0.49
LIME1-203ENST00000465591 TLNRD1Q9H1K6 362 aa18.09■□□□□ 0.49
LIME1-203ENST00000465591 DUX4Q9UBX2 424 aa18.09■□□□□ 0.49
LIME1-203ENST00000465591 MAGEB4O15481 346 aaPredicted RBP18.08■□□□□ 0.48
LIME1-203ENST00000465591 CST4P01036 141 aa18.08■□□□□ 0.48
LIME1-203ENST00000465591 GNALP38405 381 aa18.08■□□□□ 0.48
LIME1-203ENST00000465591 ROM1Q03395 351 aa18.08■□□□□ 0.48
LIME1-203ENST00000465591 MFGE8Q08431 387 aaPredicted RBP18.08■□□□□ 0.48
LIME1-203ENST00000465591 DEGS2Q6QHC5 323 aa18.08■□□□□ 0.48
LIME1-203ENST00000465591 GALNT4Q8N4A0 578 aa18.08■□□□□ 0.48
LIME1-203ENST00000465591 FAM216AQ8WUB2 273 aa18.08■□□□□ 0.48
LIME1-203ENST00000465591 OR5P3Q8WZ94 311 aa18.08■□□□□ 0.48
LIME1-203ENST00000465591 C1orf147Q96MC9 270 aaPredicted RBP18.08■□□□□ 0.48
LIME1-203ENST00000465591 CNN2Q99439 309 aaKnown RBP18.08■□□□□ 0.48
LIME1-203ENST00000465591 RNPEPL1Q9HAU8 725 aa18.08■□□□□ 0.48
LIME1-203ENST00000465591 ADGRL4Q9HBW9 690 aa18.08■□□□□ 0.48
LIME1-203ENST00000465591 OAZ3Q9UMX2 235 aa18.08■□□□□ 0.48
LIME1-203ENST00000465591 TRAV40A0A0B4J280 105 aa18.07■□□□□ 0.48
LIME1-203ENST00000465591 TMEM269A0A1B0GVZ9 245 aa18.07■□□□□ 0.48
LIME1-203ENST00000465591 TRIM77I1YAP6 450 aa18.07■□□□□ 0.48
LIME1-203ENST00000465591 CDIPTO14735 213 aa18.07■□□□□ 0.48
LIME1-203ENST00000465591 PPIAL4GP0DN37 164 aa18.07■□□□□ 0.48
LIME1-203ENST00000465591 FCGR1AP12314 374 aa18.07■□□□□ 0.48
LIME1-203ENST00000465591 ACTR3P61158 418 aa18.07■□□□□ 0.48
LIME1-203ENST00000465591 FGF12P61328 243 aa18.07■□□□□ 0.48
LIME1-203ENST00000465591 UBA52P62987 128 aaKnown RBP18.07■□□□□ 0.48
LIME1-203ENST00000465591 KCNJ8Q15842 424 aa18.07■□□□□ 0.48
LIME1-203ENST00000465591 NXNL2Q5VZ03 156 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms