RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 CRLF2Q9HC73 371 aa12□□□□□ -0.49
HDAC6-215ENST00000465457 PNRC2Q9NPJ4 139 aaKnown RBP12□□□□□ -0.49
HDAC6-215ENST00000465457 GLRX2Q9NS18 164 aa12□□□□□ -0.49
HDAC6-215ENST00000465457 ZNF701Q9NV72 531 aaPredicted RBP12□□□□□ -0.49
HDAC6-215ENST00000465457 NDRG3Q9UGV2 375 aa12□□□□□ -0.49
HDAC6-215ENST00000465457 ATPIF1Q9UII2 106 aa12□□□□□ -0.49
HDAC6-215ENST00000465457 RPL36A-HNRNPH2H7BZ11 118 aa11.99□□□□□ -0.49
HDAC6-215ENST00000465457 CD5LO43866 347 aa11.99□□□□□ -0.49
HDAC6-215ENST00000465457 KRT33AO76009 404 aa11.99□□□□□ -0.49
HDAC6-215ENST00000465457 UBL3O95164 117 aa11.99□□□□□ -0.49
HDAC6-215ENST00000465457 TTRP02766 147 aa11.99□□□□□ -0.49
HDAC6-215ENST00000465457 ERCC1P07992 297 aaPredicted RBP11.99□□□□□ -0.49
HDAC6-215ENST00000465457 ACSM4P0C7M7 580 aa11.99□□□□□ -0.49
HDAC6-215ENST00000465457 PAX1P15863 534 aa11.99□□□□□ -0.49
HDAC6-215ENST00000465457 CCL1P22362 96 aa11.99□□□□□ -0.49
HDAC6-215ENST00000465457 AZGP1P25311 298 aaKnown RBP11.99□□□□□ -0.49
HDAC6-215ENST00000465457 CX3CR1P49238 355 aa11.99□□□□□ -0.49
HDAC6-215ENST00000465457 SRYQ05066 204 aa11.99□□□□□ -0.49
HDAC6-215ENST00000465457 CLEC12BQ2HXU8 276 aa11.99□□□□□ -0.49
HDAC6-215ENST00000465457 ADGRE4PQ86SQ3 457 aa11.99□□□□□ -0.49
HDAC6-215ENST00000465457 RDH10Q8IZV5 341 aa11.99□□□□□ -0.49
HDAC6-215ENST00000465457 C19orf18Q8NEA5 215 aa11.99□□□□□ -0.49
HDAC6-215ENST00000465457 OR51A4Q8NGJ6 313 aa11.99□□□□□ -0.49
HDAC6-215ENST00000465457 ABHD3Q8WU67 409 aa11.99□□□□□ -0.49
HDAC6-215ENST00000465457 FOXB1Q99853 325 aa11.99□□□□□ -0.49
HDAC6-215ENST00000465457 GPR35Q9HC97 309 aa11.99□□□□□ -0.49
HDAC6-215ENST00000465457 SLC17A5Q9NRA2 495 aa11.99□□□□□ -0.49
HDAC6-215ENST00000465457 CLCF1Q9UBD9 225 aa11.99□□□□□ -0.49
HDAC6-215ENST00000465457 STEAP1Q9UHE8 339 aa11.99□□□□□ -0.49
HDAC6-215ENST00000465457 MEGF8Q7Z7M0 2845 aa11.99□□□□□ -0.49
HDAC6-215ENST00000465457 RER1O15258 196 aa11.98□□□□□ -0.49
HDAC6-215ENST00000465457 SYT7O43581 403 aa11.98□□□□□ -0.49
HDAC6-215ENST00000465457 EIF4EP06730 217 aaKnown RBP11.98□□□□□ -0.49
HDAC6-215ENST00000465457 YES1P07947 543 aa11.98□□□□□ -0.49
HDAC6-215ENST00000465457 IGFBP3P17936 291 aaPredicted RBP11.98□□□□□ -0.49
HDAC6-215ENST00000465457 OTX1P32242 354 aaPredicted RBP11.98□□□□□ -0.49
HDAC6-215ENST00000465457 INPP1P49441 399 aa11.98□□□□□ -0.49
HDAC6-215ENST00000465457 MRPS10P82664 201 aaKnown RBP11.98□□□□□ -0.49
HDAC6-215ENST00000465457 RAB11BQ15907 218 aa11.98□□□□□ -0.49
HDAC6-215ENST00000465457 ODF4Q2M2E3 257 aa11.98□□□□□ -0.49
HDAC6-215ENST00000465457 CHRFAM7AQ494W8 412 aa11.98□□□□□ -0.49
HDAC6-215ENST00000465457 MZT2BQ6NZ67 158 aa11.98□□□□□ -0.49
HDAC6-215ENST00000465457 ZNF474Q6S9Z5 364 aaPredicted RBP11.98□□□□□ -0.49
HDAC6-215ENST00000465457 DOK3Q7L591 496 aa11.98□□□□□ -0.49
HDAC6-215ENST00000465457 DPPA2Q7Z7J5 298 aa11.98□□□□□ -0.49
HDAC6-215ENST00000465457 SNX29P2Q8IUI4 249 aa11.98□□□□□ -0.49
HDAC6-215ENST00000465457 SERPINA12Q8IW75 414 aa11.98□□□□□ -0.49
HDAC6-215ENST00000465457 ZNF283Q8N7M2 679 aa11.98□□□□□ -0.49
HDAC6-215ENST00000465457 OR4M1Q8NGD0 313 aa11.98□□□□□ -0.49
HDAC6-215ENST00000465457 OR52H1Q8NGJ2 320 aa11.98□□□□□ -0.49
HDAC6-215ENST00000465457 OR6M1Q8NGM8 313 aa11.98□□□□□ -0.49
HDAC6-215ENST00000465457 OR10AC1Q8NH08 325 aa11.98□□□□□ -0.49
HDAC6-215ENST00000465457 LGALS14Q8TCE9 139 aa11.98□□□□□ -0.49
HDAC6-215ENST00000465457 TMEM171Q8WVE6 324 aa11.98□□□□□ -0.49
HDAC6-215ENST00000465457 C10orf35Q96D05 121 aa11.98□□□□□ -0.49
HDAC6-215ENST00000465457 GFI1Q99684 422 aa11.98□□□□□ -0.49
HDAC6-215ENST00000465457 REG4Q9BYZ8 158 aa11.98□□□□□ -0.49
HDAC6-215ENST00000465457 SLC22A4Q9H015 551 aa11.98□□□□□ -0.49
HDAC6-215ENST00000465457 OPN3Q9H1Y3 402 aaPredicted RBP11.98□□□□□ -0.49
HDAC6-215ENST00000465457 ABCG5Q9H222 651 aa11.98□□□□□ -0.49
HDAC6-215ENST00000465457 LIN7BQ9HAP6 207 aa11.98□□□□□ -0.49
HDAC6-215ENST00000465457 ZNF275Q9NSD4 429 aaPredicted RBP11.98□□□□□ -0.49
HDAC6-215ENST00000465457 ZNF391Q9UJN7 358 aa11.98□□□□□ -0.49
HDAC6-215ENST00000465457 MALRD1Q5VYJ5 2156 aa11.98□□□□□ -0.49
HDAC6-215ENST00000465457 ALPK2Q86TB3 2170 aa11.98□□□□□ -0.49
HDAC6-215ENST00000465457 TRAV8-7A0A075B6U6 113 aa11.97□□□□□ -0.49
HDAC6-215ENST00000465457 A0A0U1RQV5 110 aa11.97□□□□□ -0.49
HDAC6-215ENST00000465457 A0A1W2PQ09 198 aa11.97□□□□□ -0.49
HDAC6-215ENST00000465457 ZNF587BE7ETH6 402 aa11.97□□□□□ -0.49
HDAC6-215ENST00000465457 SLC17A2O00624 439 aa11.97□□□□□ -0.49
HDAC6-215ENST00000465457 CTDSPLO15194 276 aa11.97□□□□□ -0.49
HDAC6-215ENST00000465457 SGCEO43556 437 aa11.97□□□□□ -0.49
HDAC6-215ENST00000465457 SULT1B1O43704 296 aa11.97□□□□□ -0.49
HDAC6-215ENST00000465457 PFDN1O60925 122 aa11.97□□□□□ -0.49
HDAC6-215ENST00000465457 TGM6O95932 706 aa11.97□□□□□ -0.49
HDAC6-215ENST00000465457 PAHP00439 452 aa11.97□□□□□ -0.49
HDAC6-215ENST00000465457 CSF3P09919 207 aa11.97□□□□□ -0.49
HDAC6-215ENST00000465457 CD37P11049 281 aa11.97□□□□□ -0.49
HDAC6-215ENST00000465457 SNRPBP14678 240 aaKnown RBP11.97□□□□□ -0.49
HDAC6-215ENST00000465457 ZNF20P17024 532 aa11.97□□□□□ -0.49
HDAC6-215ENST00000465457 ADRA2CP18825 462 aa11.97□□□□□ -0.49
HDAC6-215ENST00000465457 MNDAP41218 407 aa11.97□□□□□ -0.49
HDAC6-215ENST00000465457 ZNF121P58317 390 aaPredicted RBP11.97□□□□□ -0.49
HDAC6-215ENST00000465457 CEACAM16Q2WEN9 425 aa11.97□□□□□ -0.49
HDAC6-215ENST00000465457 HES5Q5TA89 166 aa11.97□□□□□ -0.49
HDAC6-215ENST00000465457 DRAM2Q6UX65 266 aa11.97□□□□□ -0.49
HDAC6-215ENST00000465457 PGAP1Q75T13 922 aa11.97□□□□□ -0.49
HDAC6-215ENST00000465457 ZNF627Q7L945 461 aa11.97□□□□□ -0.49
HDAC6-215ENST00000465457 CDH26Q8IXH8 852 aa11.97□□□□□ -0.49
HDAC6-215ENST00000465457 SLC22A24Q8N4F4 322 aa11.97□□□□□ -0.49
HDAC6-215ENST00000465457 OR5D14Q8NGL3 314 aa11.97□□□□□ -0.49
HDAC6-215ENST00000465457 ITFG2Q969R8 447 aa11.97□□□□□ -0.49
HDAC6-215ENST00000465457 APH1AQ96BI3 265 aa11.97□□□□□ -0.49
HDAC6-215ENST00000465457 S100A16Q96FQ6 103 aaKnown RBP11.97□□□□□ -0.49
HDAC6-215ENST00000465457 ALKBH3Q96Q83 286 aaPredicted RBP11.97□□□□□ -0.49
HDAC6-215ENST00000465457 PIGMQ9H3S5 423 aa11.97□□□□□ -0.49
HDAC6-215ENST00000465457 C14orf119Q9NWQ9 140 aa11.97□□□□□ -0.49
HDAC6-215ENST00000465457 TIMM10BQ9Y5J6 103 aa11.97□□□□□ -0.49
HDAC6-215ENST00000465457 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.96□□□□□ -0.49
HDAC6-215ENST00000465457 SLC22A20A6NK97 555 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms