RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 PRSS35Q8N3Z0 413 aa14.37□□□□□ -0.11
USP39-211ENST00000465282 PPP1R14AQ96A00 147 aa14.37□□□□□ -0.11
USP39-211ENST00000465282 RNF166Q96A37 237 aaPredicted RBP14.37□□□□□ -0.11
USP39-211ENST00000465282 C10orf35Q96D05 121 aa14.37□□□□□ -0.11
USP39-211ENST00000465282 CNBD2Q96M20 576 aa14.37□□□□□ -0.11
USP39-211ENST00000465282 OR2V2Q96R30 315 aa14.37□□□□□ -0.11
USP39-211ENST00000465282 ADAT1Q9BUB4 502 aaKnown RBP14.37□□□□□ -0.11
USP39-211ENST00000465282 ISG20L2Q9H9L3 353 aaKnown RBP14.37□□□□□ -0.11
USP39-211ENST00000465282 C14orf119Q9NWQ9 140 aa14.37□□□□□ -0.11
USP39-211ENST00000465282 FRRS1LQ9P0K9 344 aa14.37□□□□□ -0.11
USP39-211ENST00000465282 TEP1Q99973 2627 aaKnown RBP14.37□□□□□ -0.11
USP39-211ENST00000465282 ZNF816-ZNF321PA0A0X1KG74 233 aa14.36□□□□□ -0.11
USP39-211ENST00000465282 A0A1B0GTI1 187 aa14.36□□□□□ -0.11
USP39-211ENST00000465282 A0A1B0GVI7 797 aa14.36□□□□□ -0.11
USP39-211ENST00000465282 H0YL77 283 aa14.36□□□□□ -0.11
USP39-211ENST00000465282 RP2O75695 350 aa14.36□□□□□ -0.11
USP39-211ENST00000465282 PTBP3O95758 552 aaKnown RBP14.36□□□□□ -0.11
USP39-211ENST00000465282 CDK1P06493 297 aa14.36□□□□□ -0.11
USP39-211ENST00000465282 FOSL1P15407 271 aa14.36□□□□□ -0.11
USP39-211ENST00000465282 COL8A2P25067 703 aa14.36□□□□□ -0.11
USP39-211ENST00000465282 ACKR3P25106 362 aa14.36□□□□□ -0.11
USP39-211ENST00000465282 PSMB10P40306 273 aa14.36□□□□□ -0.11
USP39-211ENST00000465282 GATA4P43694 442 aa14.36□□□□□ -0.11
USP39-211ENST00000465282 RIN1Q13671 783 aa14.36□□□□□ -0.11
USP39-211ENST00000465282 ALKBH1Q13686 389 aaKnown RBP14.36□□□□□ -0.11
USP39-211ENST00000465282 RBM48Q5RL73 367 aaKnown RBP14.36□□□□□ -0.11
USP39-211ENST00000465282 OR10AD1Q8NGE0 317 aa14.36□□□□□ -0.11
USP39-211ENST00000465282 FAM71F1Q96KD3 344 aaPredicted RBP14.36□□□□□ -0.11
USP39-211ENST00000465282 MEGF10Q96KG7 1140 aa14.36□□□□□ -0.11
USP39-211ENST00000465282 PAPOLGQ9BWT3 736 aaKnown RBP14.36□□□□□ -0.11
USP39-211ENST00000465282 DUSP21Q9H596 190 aa14.36□□□□□ -0.11
USP39-211ENST00000465282 ENPP5Q9UJA9 477 aa14.36□□□□□ -0.11
USP39-211ENST00000465282 BLOC1S6Q9UL45 172 aa14.36□□□□□ -0.11
USP39-211ENST00000465282 RHBDD3Q9Y3P4 386 aa14.36□□□□□ -0.11
USP39-211ENST00000465282 PCDHGB5Q9Y5G0 923 aa14.36□□□□□ -0.11
USP39-211ENST00000465282 V9GYS6 101 aa14.36□□□□□ -0.11
USP39-211ENST00000465282 HIVEP1P15822 2718 aa14.35□□□□□ -0.11
USP39-211ENST00000465282 IGHV4-30-2A0A087WSY4 118 aa14.35□□□□□ -0.11
USP39-211ENST00000465282 TMEM212A6NML5 194 aa14.35□□□□□ -0.11
USP39-211ENST00000465282 ANXA2P2A6NMY6 339 aa14.35□□□□□ -0.11
USP39-211ENST00000465282 VWC2LB2RUY7 222 aa14.35□□□□□ -0.11
USP39-211ENST00000465282 PTGES3LE9PB15 166 aa14.35□□□□□ -0.11
USP39-211ENST00000465282 F5H5P2 479 aa14.35□□□□□ -0.11
USP39-211ENST00000465282 P2RY10O00398 339 aa14.35□□□□□ -0.11
USP39-211ENST00000465282 SYT7O43581 403 aa14.35□□□□□ -0.11
USP39-211ENST00000465282 HLA-DPB1P04440 258 aa14.35□□□□□ -0.11
USP39-211ENST00000465282 KIR3DL2P43630 455 aa14.35□□□□□ -0.11
USP39-211ENST00000465282 CDH15P55291 814 aa14.35□□□□□ -0.11
USP39-211ENST00000465282 SLC35A2P78381 396 aa14.35□□□□□ -0.11
USP39-211ENST00000465282 CARTPTQ16568 116 aa14.35□□□□□ -0.11
USP39-211ENST00000465282 ZNF181Q2M3W8 571 aa14.35□□□□□ -0.11
USP39-211ENST00000465282 RPL22L1Q6P5R6 122 aaKnown RBP14.35□□□□□ -0.11
USP39-211ENST00000465282 OR14K1Q8NGZ2 314 aa14.35□□□□□ -0.11
USP39-211ENST00000465282 OR8S1Q8NH09 359 aa14.35□□□□□ -0.11
USP39-211ENST00000465282 ITLN1Q8WWA0 313 aa14.35□□□□□ -0.11
USP39-211ENST00000465282 YIPF5Q969M3 257 aa14.35□□□□□ -0.11
USP39-211ENST00000465282 CDCA4Q9BXL8 241 aa14.35□□□□□ -0.11
USP39-211ENST00000465282 REG4Q9BYZ8 158 aa14.35□□□□□ -0.11
USP39-211ENST00000465282 GCM1Q9NP62 436 aa14.35□□□□□ -0.11
USP39-211ENST00000465282 BABAM2Q9NXR7 383 aa14.35□□□□□ -0.11
USP39-211ENST00000465282 PPP1R3CQ9UQK1 317 aa14.35□□□□□ -0.11
USP39-211ENST00000465282 ERGIC3Q9Y282 383 aa14.35□□□□□ -0.11
USP39-211ENST00000465282 OR4C45A6NMZ5 311 aa14.34□□□□□ -0.11
USP39-211ENST00000465282 CLDN25C9JDP6 229 aa14.34□□□□□ -0.11
USP39-211ENST00000465282 CDC14BO60729 498 aa14.34□□□□□ -0.11
USP39-211ENST00000465282 CRHBPP24387 322 aa14.34□□□□□ -0.11
USP39-211ENST00000465282 C21orf33P30042 268 aaPredicted RBP14.34□□□□□ -0.11
USP39-211ENST00000465282 NR4A2P43354 598 aa14.34□□□□□ -0.11
USP39-211ENST00000465282 NANOS3P60323 173 aaKnown RBP14.34□□□□□ -0.11
USP39-211ENST00000465282 MVKQ03426 396 aa14.34□□□□□ -0.11
USP39-211ENST00000465282 MAB21L1Q13394 359 aa14.34□□□□□ -0.11
USP39-211ENST00000465282 PEG10Q86TG7 708 aaKnown RBP14.34□□□□□ -0.11
USP39-211ENST00000465282 HPS1Q92902 700 aa14.34□□□□□ -0.11
USP39-211ENST00000465282 TIMD4Q96H15 378 aa14.34□□□□□ -0.11
USP39-211ENST00000465282 HIST1H2AAQ96QV6 131 aa14.34□□□□□ -0.11
USP39-211ENST00000465282 MICU1Q9BPX6 476 aa14.34□□□□□ -0.11
USP39-211ENST00000465282 TMUB1Q9BVT8 246 aa14.34□□□□□ -0.11
USP39-211ENST00000465282 COMMD4Q9H0A8 199 aa14.34□□□□□ -0.11
USP39-211ENST00000465282 TRIM36Q9NQ86 728 aa14.34□□□□□ -0.11
USP39-211ENST00000465282 ZNF275Q9NSD4 429 aaPredicted RBP14.34□□□□□ -0.11
USP39-211ENST00000465282 CLEC2DQ9UHP7 191 aa14.34□□□□□ -0.11
USP39-211ENST00000465282 HHLA2Q9UM44 414 aa14.34□□□□□ -0.11
USP39-211ENST00000465282 PIGLQ9Y2B2 252 aa14.34□□□□□ -0.11
USP39-211ENST00000465282 TRBV2A0A0J9YWF9 115 aa14.33□□□□□ -0.12
USP39-211ENST00000465282 TMEM210A6NLX4 147 aa14.33□□□□□ -0.12
USP39-211ENST00000465282 LRRC30A6NM36 301 aa14.33□□□□□ -0.12
USP39-211ENST00000465282 LYNX1G3V0Z9 82 aa14.33□□□□□ -0.12
USP39-211ENST00000465282 MYL12BO14950 172 aa14.33□□□□□ -0.12
USP39-211ENST00000465282 LYNX1P0DP58 116 aa14.33□□□□□ -0.12
USP39-211ENST00000465282 CD99P14209 185 aa14.33□□□□□ -0.12
USP39-211ENST00000465282 GPR6P46095 362 aaPredicted RBP14.33□□□□□ -0.12
USP39-211ENST00000465282 TAS2R43P59537 309 aa14.33□□□□□ -0.12
USP39-211ENST00000465282 LOXL1Q08397 574 aaPredicted RBP14.33□□□□□ -0.12
USP39-211ENST00000465282 PRDX4Q13162 271 aa14.33□□□□□ -0.12
USP39-211ENST00000465282 CLVS2Q5SYC1 327 aa14.33□□□□□ -0.12
USP39-211ENST00000465282 OR2G6Q5TZ20 316 aa14.33□□□□□ -0.12
USP39-211ENST00000465282 TMEM42Q69YG0 159 aa14.33□□□□□ -0.12
USP39-211ENST00000465282 ZDHHC23Q8IYP9 409 aa14.33□□□□□ -0.12
USP39-211ENST00000465282 ZNF676Q8N7Q3 588 aa14.33□□□□□ -0.12
USP39-211ENST00000465282 NANOGP1Q8N7R0 232 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms