RNA–Protein interactions for RNA: ENST00000465238.5

COL7A1-205, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-205ENST00000465238 hCG_38984A0A1B0GV85 526 aa14.98□□□□□ -0.01
COL7A1-205ENST00000465238 ANKRD30BLA7E2S9 258 aa14.98□□□□□ -0.01
COL7A1-205ENST00000465238 J3QLW9 94 aa14.98□□□□□ -0.01
COL7A1-205ENST00000465238 FAM20BO75063 409 aa14.98□□□□□ -0.01
COL7A1-205ENST00000465238 SRSF10O75494 262 aaKnown RBP14.98□□□□□ -0.01
COL7A1-205ENST00000465238 IGHA1P01876 353 aa14.98□□□□□ -0.01
COL7A1-205ENST00000465238 CD55P08174 381 aa14.98□□□□□ -0.01
COL7A1-205ENST00000465238 ZNF19P17023 458 aa14.98□□□□□ -0.01
COL7A1-205ENST00000465238 DCKP27707 260 aa14.98□□□□□ -0.01
COL7A1-205ENST00000465238 GALEQ14376 348 aa14.98□□□□□ -0.01
COL7A1-205ENST00000465238 SNCBQ16143 134 aa14.98□□□□□ -0.01
COL7A1-205ENST00000465238 CLDND2Q8NHS1 167 aa14.98□□□□□ -0.01
COL7A1-205ENST00000465238 FBLIM1Q8WUP2 373 aa14.98□□□□□ -0.01
COL7A1-205ENST00000465238 PPP1R14AQ96A00 147 aa14.98□□□□□ -0.01
COL7A1-205ENST00000465238 ALG8Q9BVK2 526 aa14.98□□□□□ -0.01
COL7A1-205ENST00000465238 G6PC2Q9NQR9 355 aa14.98□□□□□ -0.01
COL7A1-205ENST00000465238 ZNF275Q9NSD4 429 aaPredicted RBP14.98□□□□□ -0.01
COL7A1-205ENST00000465238 ERVK13-1Q9NX77 482 aa14.98□□□□□ -0.01
COL7A1-205ENST00000465238 MRPL15Q9P015 296 aaKnown RBP14.98□□□□□ -0.01
COL7A1-205ENST00000465238 NOP16Q9Y3C1 178 aaKnown RBP14.98□□□□□ -0.01
COL7A1-205ENST00000465238 IGHV1-69-2A0A0G2JMI3 117 aa14.97□□□□□ -0.01
COL7A1-205ENST00000465238 H0YL77 283 aa14.97□□□□□ -0.01
COL7A1-205ENST00000465238 CDC14BO60729 498 aa14.97□□□□□ -0.01
COL7A1-205ENST00000465238 TNFRSF1AP19438 455 aa14.97□□□□□ -0.01
COL7A1-205ENST00000465238 CA6P23280 308 aa14.97□□□□□ -0.01
COL7A1-205ENST00000465238 CRYBB2P43320 205 aa14.97□□□□□ -0.01
COL7A1-205ENST00000465238 OR12D2P58182 307 aa14.97□□□□□ -0.01
COL7A1-205ENST00000465238 OR8G1Q15617 311 aa14.97□□□□□ -0.01
COL7A1-205ENST00000465238 EGFL6Q8IUX8 553 aa14.97□□□□□ -0.01
COL7A1-205ENST00000465238 ELMOD2Q8IZ81 293 aa14.97□□□□□ -0.01
COL7A1-205ENST00000465238 FTMTQ8N4E7 242 aa14.97□□□□□ -0.01
COL7A1-205ENST00000465238 CSNK2A3Q8NEV1 391 aa14.97□□□□□ -0.01
COL7A1-205ENST00000465238 BPIFB6Q8NFQ5 453 aa14.97□□□□□ -0.01
COL7A1-205ENST00000465238 OR10AD1Q8NGE0 317 aa14.97□□□□□ -0.01
COL7A1-205ENST00000465238 OR51E1Q8TCB6 317 aa14.97□□□□□ -0.01
COL7A1-205ENST00000465238 RORBQ92753 470 aa14.97□□□□□ -0.01
COL7A1-205ENST00000465238 YIPF5Q969M3 257 aa14.97□□□□□ -0.01
COL7A1-205ENST00000465238 TMEM80Q96HE8 168 aa14.97□□□□□ -0.01
COL7A1-205ENST00000465238 LYZL4Q96KX0 146 aa14.97□□□□□ -0.01
COL7A1-205ENST00000465238 PLCXD1Q9NUJ7 323 aa14.97□□□□□ -0.01
COL7A1-205ENST00000465238 ACOXLQ9NUZ1 547 aa14.97□□□□□ -0.01
COL7A1-205ENST00000465238 CHCHD3Q9NX63 227 aaKnown RBP14.97□□□□□ -0.01
COL7A1-205ENST00000465238 IL19Q9UHD0 177 aa14.97□□□□□ -0.01
COL7A1-205ENST00000465238 EFCAB10A6NFE3 127 aa14.96□□□□□ -0.01
COL7A1-205ENST00000465238 MLNRO43193 412 aa14.96□□□□□ -0.01
COL7A1-205ENST00000465238 PPIHO43447 177 aaKnown RBP14.96□□□□□ -0.01
COL7A1-205ENST00000465238 GMDSO60547 372 aa14.96□□□□□ -0.01
COL7A1-205ENST00000465238 RP2O75695 350 aa14.96□□□□□ -0.01
COL7A1-205ENST00000465238 TTRP02766 147 aa14.96□□□□□ -0.01
COL7A1-205ENST00000465238 HLA-DPB1P04440 258 aa14.96□□□□□ -0.01
COL7A1-205ENST00000465238 MYF6P23409 242 aa14.96□□□□□ -0.01
COL7A1-205ENST00000465238 PSMB10P40306 273 aa14.96□□□□□ -0.01
COL7A1-205ENST00000465238 MAP2K3P46734 347 aa14.96□□□□□ -0.01
COL7A1-205ENST00000465238 SRP9P49458 86 aaKnown RBP14.96□□□□□ -0.01
COL7A1-205ENST00000465238 CSNK2BP67870 215 aa14.96□□□□□ -0.01
COL7A1-205ENST00000465238 MED21Q13503 144 aa14.96□□□□□ -0.01
COL7A1-205ENST00000465238 OR8B8Q15620 311 aa14.96□□□□□ -0.01
COL7A1-205ENST00000465238 HFEQ30201 348 aa14.96□□□□□ -0.01
COL7A1-205ENST00000465238 LAIR2Q6ISS4 152 aa14.96□□□□□ -0.01
COL7A1-205ENST00000465238 CATSPERDQ86XM0 798 aa14.96□□□□□ -0.01
COL7A1-205ENST00000465238 SYS1Q8N2H4 156 aa14.96□□□□□ -0.01
COL7A1-205ENST00000465238 GGHQ92820 318 aa14.96□□□□□ -0.01
COL7A1-205ENST00000465238 ITFG2Q969R8 447 aa14.96□□□□□ -0.01
COL7A1-205ENST00000465238 TMEM186Q96B77 213 aa14.96□□□□□ -0.01
COL7A1-205ENST00000465238 C4orf36Q96KX1 117 aa14.96□□□□□ -0.01
COL7A1-205ENST00000465238 OR2V2Q96R30 315 aa14.96□□□□□ -0.01
COL7A1-205ENST00000465238 JAM3Q9BX67 310 aa14.96□□□□□ -0.01
COL7A1-205ENST00000465238 ANKRD60Q9BZ19 345 aa14.96□□□□□ -0.01
COL7A1-205ENST00000465238 NARFLQ9H6Q4 476 aa14.96□□□□□ -0.01
COL7A1-205ENST00000465238 GPR84Q9NQS5 396 aa14.96□□□□□ -0.01
COL7A1-205ENST00000465238 METRNQ9UJH8 293 aa14.96□□□□□ -0.01
COL7A1-205ENST00000465238 SLC22A13Q9Y226 551 aa14.96□□□□□ -0.01
COL7A1-205ENST00000465238 DYSFO75923 2080 aa14.96□□□□□ -0.02
COL7A1-205ENST00000465238 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.95□□□□□ -0.02
COL7A1-205ENST00000465238 A0A1B0GWJ7 208 aa14.95□□□□□ -0.02
COL7A1-205ENST00000465238 F5H5P2 479 aa14.95□□□□□ -0.02
COL7A1-205ENST00000465238 HAX1O00165 279 aa14.95□□□□□ -0.02
COL7A1-205ENST00000465238 XPNPEP2O43895 674 aa14.95□□□□□ -0.02
COL7A1-205ENST00000465238 MTRF1O75570 445 aaKnown RBP14.95□□□□□ -0.02
COL7A1-205ENST00000465238 MSMBP08118 114 aa14.95□□□□□ -0.02
COL7A1-205ENST00000465238 HTR1AP08908 422 aa14.95□□□□□ -0.02
COL7A1-205ENST00000465238 ATP6V1B1P15313 513 aa14.95□□□□□ -0.02
COL7A1-205ENST00000465238 MYL12AP19105 171 aa14.95□□□□□ -0.02
COL7A1-205ENST00000465238 GNALP38405 381 aa14.95□□□□□ -0.02
COL7A1-205ENST00000465238 ST3GAL4Q11206 333 aa14.95□□□□□ -0.02
COL7A1-205ENST00000465238 C6orf141Q5SZD1 244 aa14.95□□□□□ -0.02
COL7A1-205ENST00000465238 KLBQ86Z14 1044 aa14.95□□□□□ -0.02
COL7A1-205ENST00000465238 SPERTQ8NA61 448 aa14.95□□□□□ -0.02
COL7A1-205ENST00000465238 ITLN1Q8WWA0 313 aa14.95□□□□□ -0.02
COL7A1-205ENST00000465238 FAM71F1Q96KD3 344 aaPredicted RBP14.95□□□□□ -0.02
COL7A1-205ENST00000465238 ADAT1Q9BUB4 502 aaKnown RBP14.95□□□□□ -0.02
COL7A1-205ENST00000465238 HIF1ANQ9NWT6 349 aa14.95□□□□□ -0.02
COL7A1-205ENST00000465238 TREM2Q9NZC2 230 aa14.95□□□□□ -0.02
COL7A1-205ENST00000465238 CNOT2Q9NZN8 540 aaKnown RBP14.95□□□□□ -0.02
COL7A1-205ENST00000465238 PSORS1C1Q9UIG5 152 aa14.95□□□□□ -0.02
COL7A1-205ENST00000465238 RAB26Q9ULW5 256 aa14.95□□□□□ -0.02
COL7A1-205ENST00000465238 DIMT1Q9UNQ2 313 aaKnown RBP14.95□□□□□ -0.02
COL7A1-205ENST00000465238 EXOSC1Q9Y3B2 195 aaKnown RBP14.95□□□□□ -0.02
COL7A1-205ENST00000465238 FAM157AC9JC47 383 aa14.94□□□□□ -0.02
COL7A1-205ENST00000465238 P2RY10O00398 339 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms