RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 NIPAL2Q9H841 368 aa14.64□□□□□ -0.07
EXOSC3-203ENST00000465229 G6PC2Q9NQR9 355 aa14.64□□□□□ -0.07
EXOSC3-203ENST00000465229 RBFOX1Q9NWB1 397 aaKnown RBP14.64□□□□□ -0.07
EXOSC3-203ENST00000465229 FBXL3Q9UKT7 428 aa14.64□□□□□ -0.07
EXOSC3-203ENST00000465229 FOXJ3Q9UPW0 622 aa14.64□□□□□ -0.07
EXOSC3-203ENST00000465229 UTP20O75691 2785 aaKnown RBP14.64□□□□□ -0.07
EXOSC3-203ENST00000465229 ABCA4P78363 2273 aa14.63□□□□□ -0.07
EXOSC3-203ENST00000465229 ROS1P08922 2347 aa14.63□□□□□ -0.07
EXOSC3-203ENST00000465229 F5H5K5 113 aa14.63□□□□□ -0.07
EXOSC3-203ENST00000465229 CD2P06729 351 aa14.63□□□□□ -0.07
EXOSC3-203ENST00000465229 CECR9P0C854 216 aa14.63□□□□□ -0.07
EXOSC3-203ENST00000465229 UBCP0CG48 685 aaKnown RBP14.63□□□□□ -0.07
EXOSC3-203ENST00000465229 FSTP19883 344 aa14.63□□□□□ -0.07
EXOSC3-203ENST00000465229 OTX1P32242 354 aaPredicted RBP14.63□□□□□ -0.07
EXOSC3-203ENST00000465229 RANBP1P43487 201 aa14.63□□□□□ -0.07
EXOSC3-203ENST00000465229 MAP2K3P46734 347 aa14.63□□□□□ -0.07
EXOSC3-203ENST00000465229 PRKXP51817 358 aa14.63□□□□□ -0.07
EXOSC3-203ENST00000465229 GRB2P62993 217 aaKnown RBP14.63□□□□□ -0.07
EXOSC3-203ENST00000465229 MFGE8Q08431 387 aaPredicted RBP14.63□□□□□ -0.07
EXOSC3-203ENST00000465229 TMEM244Q5VVB8 128 aa14.63□□□□□ -0.07
EXOSC3-203ENST00000465229 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.63□□□□□ -0.07
EXOSC3-203ENST00000465229 OR51A4Q8NGJ6 313 aa14.63□□□□□ -0.07
EXOSC3-203ENST00000465229 TSEN15Q8WW01 171 aaKnown RBP14.63□□□□□ -0.07
EXOSC3-203ENST00000465229 RAB40AQ8WXH6 277 aa14.63□□□□□ -0.07
EXOSC3-203ENST00000465229 TRIM63Q969Q1 353 aa14.63□□□□□ -0.07
EXOSC3-203ENST00000465229 RFT1Q96AA3 541 aa14.63□□□□□ -0.07
EXOSC3-203ENST00000465229 ORAI1Q96D31 301 aa14.63□□□□□ -0.07
EXOSC3-203ENST00000465229 ABCG5Q9H222 651 aa14.63□□□□□ -0.07
EXOSC3-203ENST00000465229 OR52A1Q9UKL2 312 aa14.63□□□□□ -0.07
EXOSC3-203ENST00000465229 HHLA2Q9UM44 414 aa14.63□□□□□ -0.07
EXOSC3-203ENST00000465229 DHDHQ9UQ10 334 aa14.63□□□□□ -0.07
EXOSC3-203ENST00000465229 SLC22A13Q9Y226 551 aa14.63□□□□□ -0.07
EXOSC3-203ENST00000465229 C5orf49A4QMS7 147 aa14.63□□□□□ -0.07
EXOSC3-203ENST00000465229 ANXA2P2A6NMY6 339 aa14.63□□□□□ -0.07
EXOSC3-203ENST00000465229 M0R1B8 84 aa14.63□□□□□ -0.07
EXOSC3-203ENST00000465229 GSTZ1O43708 216 aaPredicted RBP14.63□□□□□ -0.07
EXOSC3-203ENST00000465229 ANXA2P07355 339 aaKnown RBP14.63□□□□□ -0.07
EXOSC3-203ENST00000465229 CD37P11049 281 aa14.63□□□□□ -0.07
EXOSC3-203ENST00000465229 APLNRP35414 380 aa14.63□□□□□ -0.07
EXOSC3-203ENST00000465229 INPP1P49441 399 aa14.63□□□□□ -0.07
EXOSC3-203ENST00000465229 HES5Q5TA89 166 aa14.63□□□□□ -0.07
EXOSC3-203ENST00000465229 NAA40Q86UY6 237 aa14.63□□□□□ -0.07
EXOSC3-203ENST00000465229 DMRTC2Q8IXT2 367 aaPredicted RBP14.63□□□□□ -0.07
EXOSC3-203ENST00000465229 PAQR4Q8N4S7 273 aaPredicted RBP14.63□□□□□ -0.07
EXOSC3-203ENST00000465229 CELF2-AS1Q8N7Q2 184 aa14.63□□□□□ -0.07
EXOSC3-203ENST00000465229 NEDD4LQ96PU5 975 aa14.63□□□□□ -0.07
EXOSC3-203ENST00000465229 ABHD1Q96SE0 405 aa14.63□□□□□ -0.07
EXOSC3-203ENST00000465229 THAP7Q9BT49 309 aaPredicted RBP14.63□□□□□ -0.07
EXOSC3-203ENST00000465229 ICE1Q9Y2F5 2266 aa14.62□□□□□ -0.07
EXOSC3-203ENST00000465229 TRAV8-7A0A075B6U6 113 aa14.62□□□□□ -0.07
EXOSC3-203ENST00000465229 A0A0B4J203 849 aa14.62□□□□□ -0.07
EXOSC3-203ENST00000465229 TMEM269A0A1B0GVZ9 245 aa14.62□□□□□ -0.07
EXOSC3-203ENST00000465229 LYRM1O43325 122 aa14.62□□□□□ -0.07
EXOSC3-203ENST00000465229 CCNOP22674 350 aa14.62□□□□□ -0.07
EXOSC3-203ENST00000465229 HSD11B1P28845 292 aa14.62□□□□□ -0.07
EXOSC3-203ENST00000465229 MNDAP41218 407 aa14.62□□□□□ -0.07
EXOSC3-203ENST00000465229 KIR2DL3P43628 341 aa14.62□□□□□ -0.07
EXOSC3-203ENST00000465229 HGFACQ04756 655 aa14.62□□□□□ -0.07
EXOSC3-203ENST00000465229 AGAP6Q5VW22 663 aa14.62□□□□□ -0.07
EXOSC3-203ENST00000465229 ACBD4Q8NC06 268 aa14.62□□□□□ -0.07
EXOSC3-203ENST00000465229 ENKURQ8TC29 256 aa14.62□□□□□ -0.07
EXOSC3-203ENST00000465229 SPTSSAQ969W0 71 aa14.62□□□□□ -0.07
EXOSC3-203ENST00000465229 MOB1AQ9H8S9 216 aa14.62□□□□□ -0.07
EXOSC3-203ENST00000465229 LIN7BQ9HAP6 207 aa14.62□□□□□ -0.07
EXOSC3-203ENST00000465229 NGBQ9NPG2 151 aa14.62□□□□□ -0.07
EXOSC3-203ENST00000465229 CRIM1Q9NZV1 1036 aa14.62□□□□□ -0.07
EXOSC3-203ENST00000465229 PKDREJQ9NTG1 2253 aa14.62□□□□□ -0.07
EXOSC3-203ENST00000465229 DPRXA6NFQ7 191 aa14.61□□□□□ -0.07
EXOSC3-203ENST00000465229 BOLA2-SMG1P6H3BVE0 249 aa14.61□□□□□ -0.07
EXOSC3-203ENST00000465229 M0R135 149 aa14.61□□□□□ -0.07
EXOSC3-203ENST00000465229 SULT1B1O43704 296 aa14.61□□□□□ -0.07
EXOSC3-203ENST00000465229 CLDN1O95832 211 aa14.61□□□□□ -0.07
EXOSC3-203ENST00000465229 ACSM4P0C7M7 580 aa14.61□□□□□ -0.07
EXOSC3-203ENST00000465229 FAM157BP0CG42 384 aa14.61□□□□□ -0.07
EXOSC3-203ENST00000465229 ZNF35P13682 527 aa14.61□□□□□ -0.07
EXOSC3-203ENST00000465229 IGFBP3P17936 291 aaPredicted RBP14.61□□□□□ -0.07
EXOSC3-203ENST00000465229 CD40P25942 277 aa14.61□□□□□ -0.07
EXOSC3-203ENST00000465229 TPTEP56180 551 aa14.61□□□□□ -0.07
EXOSC3-203ENST00000465229 NAAAQ02083 359 aa14.61□□□□□ -0.07
EXOSC3-203ENST00000465229 MADCAM1Q13477 382 aa14.61□□□□□ -0.07
EXOSC3-203ENST00000465229 TBC1D28Q2M2D7 210 aa14.61□□□□□ -0.07
EXOSC3-203ENST00000465229 CMTM4Q8IZR5 234 aa14.61□□□□□ -0.07
EXOSC3-203ENST00000465229 C15orf40Q8WUR7 153 aa14.61□□□□□ -0.07
EXOSC3-203ENST00000465229 ZNF799Q96GE5 643 aa14.61□□□□□ -0.07
EXOSC3-203ENST00000465229 FAM206AQ9NX38 181 aa14.61□□□□□ -0.07
EXOSC3-203ENST00000465229 CKLFQ9UBR5 152 aa14.61□□□□□ -0.07
EXOSC3-203ENST00000465229 OR5V1Q9UGF6 321 aa14.61□□□□□ -0.07
EXOSC3-203ENST00000465229 STEAP1Q9UHE8 339 aa14.61□□□□□ -0.07
EXOSC3-203ENST00000465229 GTF2A1LQ9UNN4 478 aa14.61□□□□□ -0.07
EXOSC3-203ENST00000465229 HEATR1Q9H583 2144 aaKnown RBP14.61□□□□□ -0.07
EXOSC3-203ENST00000465229 IGHV2OR16-5A0A0B4J2B6 119 aa14.6□□□□□ -0.07
EXOSC3-203ENST00000465229 LINC00854A0A1B0GVQ3 168 aa14.6□□□□□ -0.07
EXOSC3-203ENST00000465229 MEGF11A6BM72 1044 aa14.6□□□□□ -0.07
EXOSC3-203ENST00000465229 PRSS44E7EML9 344 aa14.6□□□□□ -0.07
EXOSC3-203ENST00000465229 CALCRP30988 508 aa14.6□□□□□ -0.07
EXOSC3-203ENST00000465229 CX3CR1P49238 355 aa14.6□□□□□ -0.07
EXOSC3-203ENST00000465229 BCL2L15Q5TBC7 163 aa14.6□□□□□ -0.07
EXOSC3-203ENST00000465229 TMEM108Q6UXF1 575 aa14.6□□□□□ -0.07
EXOSC3-203ENST00000465229 PRSS45Q7RTY3 260 aa14.6□□□□□ -0.07
EXOSC3-203ENST00000465229 ELMOD2Q8IZ81 293 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms