RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 CST4P01036 141 aa12.25□□□□□ -0.45
SQSTM1-205ENST00000464493 DCKP27707 260 aa12.25□□□□□ -0.45
SQSTM1-205ENST00000464493 PSMB10P40306 273 aa12.25□□□□□ -0.45
SQSTM1-205ENST00000464493 GATA4P43694 442 aa12.25□□□□□ -0.45
SQSTM1-205ENST00000464493 MVKQ03426 396 aa12.25□□□□□ -0.45
SQSTM1-205ENST00000464493 RIPPLY1Q0D2K3 151 aa12.25□□□□□ -0.45
SQSTM1-205ENST00000464493 HNRNPA0Q13151 305 aaKnown RBP12.25□□□□□ -0.45
SQSTM1-205ENST00000464493 TMEM249Q2WGJ8 235 aa12.25□□□□□ -0.45
SQSTM1-205ENST00000464493 AVPI1Q5T686 147 aa12.25□□□□□ -0.45
SQSTM1-205ENST00000464493 MOGAT3Q86VF5 341 aa12.25□□□□□ -0.45
SQSTM1-205ENST00000464493 PRSS35Q8N3Z0 413 aa12.25□□□□□ -0.45
SQSTM1-205ENST00000464493 PLPP7Q8NBV4 271 aa12.25□□□□□ -0.45
SQSTM1-205ENST00000464493 SEMA6DQ8NFY4 1073 aa12.25□□□□□ -0.45
SQSTM1-205ENST00000464493 OR8S1Q8NH09 359 aa12.25□□□□□ -0.45
SQSTM1-205ENST00000464493 ZNF420Q8TAQ5 688 aaPredicted RBP12.25□□□□□ -0.45
SQSTM1-205ENST00000464493 PIGCQ92535 297 aa12.25□□□□□ -0.45
SQSTM1-205ENST00000464493 ERGIC1Q969X5 290 aa12.25□□□□□ -0.45
SQSTM1-205ENST00000464493 RNF166Q96A37 237 aaPredicted RBP12.25□□□□□ -0.45
SQSTM1-205ENST00000464493 C4orf36Q96KX1 117 aa12.25□□□□□ -0.45
SQSTM1-205ENST00000464493 JAM3Q9BX67 310 aa12.25□□□□□ -0.45
SQSTM1-205ENST00000464493 C14orf119Q9NWQ9 140 aa12.25□□□□□ -0.45
SQSTM1-205ENST00000464493 DCAF16Q9NXF7 216 aa12.25□□□□□ -0.45
SQSTM1-205ENST00000464493 RRP15Q9Y3B9 282 aaKnown RBP12.25□□□□□ -0.45
SQSTM1-205ENST00000464493 WIPI2Q9Y4P8 454 aa12.25□□□□□ -0.45
SQSTM1-205ENST00000464493 MPC1Q9Y5U8 109 aa12.25□□□□□ -0.45
SQSTM1-205ENST00000464493 ABCA1O95477 2261 aa12.25□□□□□ -0.45
SQSTM1-205ENST00000464493 ZNF816-ZNF321PA0A0X1KG74 233 aa12.24□□□□□ -0.45
SQSTM1-205ENST00000464493 LOC100289279A0A1B0GTE1 492 aa12.24□□□□□ -0.45
SQSTM1-205ENST00000464493 A0A1B0GTI1 187 aa12.24□□□□□ -0.45
SQSTM1-205ENST00000464493 LRRC30A6NM36 301 aa12.24□□□□□ -0.45
SQSTM1-205ENST00000464493 ZNF850A8MQ14 1090 aa12.24□□□□□ -0.45
SQSTM1-205ENST00000464493 TMEM178BH3BS89 294 aa12.24□□□□□ -0.45
SQSTM1-205ENST00000464493 WNT9BO14905 357 aa12.24□□□□□ -0.45
SQSTM1-205ENST00000464493 DHRS3O75911 302 aa12.24□□□□□ -0.45
SQSTM1-205ENST00000464493 PTBP3O95758 552 aaKnown RBP12.24□□□□□ -0.45
SQSTM1-205ENST00000464493 RBMXP38159 391 aaKnown RBP12.24□□□□□ -0.45
SQSTM1-205ENST00000464493 PMELP40967 661 aa12.24□□□□□ -0.45
SQSTM1-205ENST00000464493 MPPED2Q15777 294 aa12.24□□□□□ -0.45
SQSTM1-205ENST00000464493 ODF4Q2M2E3 257 aa12.24□□□□□ -0.45
SQSTM1-205ENST00000464493 ZNF181Q2M3W8 571 aa12.24□□□□□ -0.45
SQSTM1-205ENST00000464493 WDR38Q5JTN6 314 aa12.24□□□□□ -0.45
SQSTM1-205ENST00000464493 ZBTB37Q5TC79 503 aa12.24□□□□□ -0.45
SQSTM1-205ENST00000464493 PRAMEF6Q5VXH4 476 aa12.24□□□□□ -0.45
SQSTM1-205ENST00000464493 LAIR2Q6ISS4 152 aa12.24□□□□□ -0.45
SQSTM1-205ENST00000464493 FDX2Q6P4F2 183 aa12.24□□□□□ -0.45
SQSTM1-205ENST00000464493 KRT74Q7RTS7 529 aa12.24□□□□□ -0.45
SQSTM1-205ENST00000464493 SYS1Q8N2H4 156 aa12.24□□□□□ -0.45
SQSTM1-205ENST00000464493 OR2G2Q8NGZ5 317 aa12.24□□□□□ -0.45
SQSTM1-205ENST00000464493 GGHQ92820 318 aa12.24□□□□□ -0.45
SQSTM1-205ENST00000464493 PELI1Q96FA3 418 aa12.24□□□□□ -0.45
SQSTM1-205ENST00000464493 NARFLQ9H6Q4 476 aa12.24□□□□□ -0.45
SQSTM1-205ENST00000464493 PPP1R3EQ9H7J1 279 aa12.24□□□□□ -0.45
SQSTM1-205ENST00000464493 ISG20L2Q9H9L3 353 aaKnown RBP12.24□□□□□ -0.45
SQSTM1-205ENST00000464493 ABCB9Q9NP78 766 aa12.24□□□□□ -0.45
SQSTM1-205ENST00000464493 UFSP2Q9NUQ7 469 aa12.24□□□□□ -0.45
SQSTM1-205ENST00000464493 PIGLQ9Y2B2 252 aa12.24□□□□□ -0.45
SQSTM1-205ENST00000464493 NPTNQ9Y639 398 aa12.24□□□□□ -0.45
SQSTM1-205ENST00000464493 A0A1B0GVI7 797 aa12.23□□□□□ -0.45
SQSTM1-205ENST00000464493 ANXA2P2A6NMY6 339 aa12.23□□□□□ -0.45
SQSTM1-205ENST00000464493 CYB5R3P00387 301 aaPredicted RBP12.23□□□□□ -0.45
SQSTM1-205ENST00000464493 HEXAP06865 529 aa12.23□□□□□ -0.45
SQSTM1-205ENST00000464493 GRPP07492 148 aa12.23□□□□□ -0.45
SQSTM1-205ENST00000464493 HTR1AP08908 422 aa12.23□□□□□ -0.45
SQSTM1-205ENST00000464493 LIMS3P0CW19 117 aa12.23□□□□□ -0.45
SQSTM1-205ENST00000464493 LIMS4P0CW20 117 aa12.23□□□□□ -0.45
SQSTM1-205ENST00000464493 IRF2P14316 349 aa12.23□□□□□ -0.45
SQSTM1-205ENST00000464493 KIR3DL2P43630 455 aa12.23□□□□□ -0.45
SQSTM1-205ENST00000464493 KRTAP1-1Q07627 177 aa12.23□□□□□ -0.45
SQSTM1-205ENST00000464493 PRDX4Q13162 271 aa12.23□□□□□ -0.45
SQSTM1-205ENST00000464493 CYB5R2Q6BCY4 276 aa12.23□□□□□ -0.45
SQSTM1-205ENST00000464493 IZUMO2Q6UXV1 221 aa12.23□□□□□ -0.45
SQSTM1-205ENST00000464493 Q6ZSR3 168 aa12.23□□□□□ -0.45
SQSTM1-205ENST00000464493 DOK3Q7L591 496 aa12.23□□□□□ -0.45
SQSTM1-205ENST00000464493 ZDHHC23Q8IYP9 409 aa12.23□□□□□ -0.45
SQSTM1-205ENST00000464493 BPIFB6Q8NFQ5 453 aa12.23□□□□□ -0.45
SQSTM1-205ENST00000464493 OR11L1Q8NGX0 322 aa12.23□□□□□ -0.45
SQSTM1-205ENST00000464493 OR14K1Q8NGZ2 314 aa12.23□□□□□ -0.45
SQSTM1-205ENST00000464493 CLDND2Q8NHS1 167 aa12.23□□□□□ -0.45
SQSTM1-205ENST00000464493 Q8TCH9 128 aa12.23□□□□□ -0.45
SQSTM1-205ENST00000464493 HPS1Q92902 700 aa12.23□□□□□ -0.45
SQSTM1-205ENST00000464493 ITPKCQ96DU7 683 aa12.23□□□□□ -0.45
SQSTM1-205ENST00000464493 TMEM80Q96HE8 168 aa12.23□□□□□ -0.45
SQSTM1-205ENST00000464493 HIST1H2AAQ96QV6 131 aa12.23□□□□□ -0.45
SQSTM1-205ENST00000464493 MICU1Q9BPX6 476 aa12.23□□□□□ -0.45
SQSTM1-205ENST00000464493 FN3KRPQ9HA64 309 aa12.23□□□□□ -0.45
SQSTM1-205ENST00000464493 PLCXD1Q9NUJ7 323 aa12.23□□□□□ -0.45
SQSTM1-205ENST00000464493 FRRS1LQ9P0K9 344 aa12.23□□□□□ -0.45
SQSTM1-205ENST00000464493 ENPP5Q9UJA9 477 aa12.23□□□□□ -0.45
SQSTM1-205ENST00000464493 DIMT1Q9UNQ2 313 aaKnown RBP12.23□□□□□ -0.45
SQSTM1-205ENST00000464493 V9GYS6 101 aa12.23□□□□□ -0.45
SQSTM1-205ENST00000464493 ISPDA4D126 451 aa12.22□□□□□ -0.45
SQSTM1-205ENST00000464493 EFCAB10A6NFE3 127 aa12.22□□□□□ -0.45
SQSTM1-205ENST00000464493 DHRS7CA6NNS2 312 aa12.22□□□□□ -0.45
SQSTM1-205ENST00000464493 SYT7O43581 403 aa12.22□□□□□ -0.45
SQSTM1-205ENST00000464493 CD5LO43866 347 aa12.22□□□□□ -0.45
SQSTM1-205ENST00000464493 XPNPEP2O43895 674 aa12.22□□□□□ -0.45
SQSTM1-205ENST00000464493 UBCP0CG48 685 aaKnown RBP12.22□□□□□ -0.45
SQSTM1-205ENST00000464493 IGHV4-31P0DP07 118 aa12.22□□□□□ -0.45
SQSTM1-205ENST00000464493 FAHP16930 419 aa12.22□□□□□ -0.45
SQSTM1-205ENST00000464493 MYL12AP19105 171 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms