RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 RNF182Q8N6D2 247 aa2.33□□□□□ -2.04
CLK1-208ENST00000464454 OR2T29Q8NH02 315 aa2.33□□□□□ -2.04
CLK1-208ENST00000464454 RTN4IP1Q8WWV3 396 aaPredicted RBP2.33□□□□□ -2.04
CLK1-208ENST00000464454 ZNF707Q96C28 371 aaPredicted RBP2.33□□□□□ -2.04
CLK1-208ENST00000464454 KCNS3Q9BQ31 491 aa2.33□□□□□ -2.04
CLK1-208ENST00000464454 EMC6Q9BV81 110 aa2.33□□□□□ -2.04
CLK1-208ENST00000464454 CYP3A43Q9HB55 503 aa2.33□□□□□ -2.04
CLK1-208ENST00000464454 FBXO6Q9NRD1 293 aaPredicted RBP2.33□□□□□ -2.04
CLK1-208ENST00000464454 ZNF257Q9Y2Q1 563 aa2.33□□□□□ -2.04
CLK1-208ENST00000464454 CBY1Q9Y3M2 126 aa2.33□□□□□ -2.04
CLK1-208ENST00000464454 SCN1AP35498 2009 aa2.33□□□□□ -2.04
CLK1-208ENST00000464454 A0A1B0GUH1 482 aa2.32□□□□□ -2.04
CLK1-208ENST00000464454 CENPXA8MT69 81 aa2.32□□□□□ -2.04
CLK1-208ENST00000464454 RPL36A-HNRNPH2H7BZ11 118 aa2.32□□□□□ -2.04
CLK1-208ENST00000464454 MANBAO00462 879 aa2.32□□□□□ -2.04
CLK1-208ENST00000464454 SLC19A2O60779 497 aa2.32□□□□□ -2.04
CLK1-208ENST00000464454 TGM6O95932 706 aa2.32□□□□□ -2.04
CLK1-208ENST00000464454 DCNP07585 359 aaKnown RBP2.32□□□□□ -2.04
CLK1-208ENST00000464454 OR1G1P47890 313 aa2.32□□□□□ -2.04
CLK1-208ENST00000464454 RPL18AQ02543 176 aaKnown RBP2.32□□□□□ -2.04
CLK1-208ENST00000464454 LY6EQ16553 131 aa2.32□□□□□ -2.04
CLK1-208ENST00000464454 UNQ9165/PRO28630Q6UXU0 137 aa2.32□□□□□ -2.04
CLK1-208ENST00000464454 NDUFAF7Q7L592 441 aa2.32□□□□□ -2.04
CLK1-208ENST00000464454 ERO1BQ86YB8 467 aa2.32□□□□□ -2.04
CLK1-208ENST00000464454 OSR2Q8N2R0 312 aa2.32□□□□□ -2.04
CLK1-208ENST00000464454 ZNF645Q8N7E2 425 aa2.32□□□□□ -2.04
CLK1-208ENST00000464454 DCAKDQ8WVC6 231 aa2.32□□□□□ -2.04
CLK1-208ENST00000464454 GHSRQ92847 366 aa2.32□□□□□ -2.04
CLK1-208ENST00000464454 CDS1Q92903 461 aa2.32□□□□□ -2.04
CLK1-208ENST00000464454 KIAA1143Q96AT1 154 aaPredicted RBP2.32□□□□□ -2.04
CLK1-208ENST00000464454 OR4K3Q96R72 315 aa2.32□□□□□ -2.04
CLK1-208ENST00000464454 CTRCQ99895 268 aa2.32□□□□□ -2.04
CLK1-208ENST00000464454 BCL7BQ9BQE9 202 aa2.32□□□□□ -2.04
CLK1-208ENST00000464454 SULT4A1Q9BR01 284 aa2.32□□□□□ -2.04
CLK1-208ENST00000464454 OR2AG1Q9H205 316 aa2.32□□□□□ -2.04
CLK1-208ENST00000464454 ARMC7Q9H6L4 198 aa2.32□□□□□ -2.04
CLK1-208ENST00000464454 FBXO8Q9NRD0 319 aa2.32□□□□□ -2.04
CLK1-208ENST00000464454 C21orf62Q9NYP8 219 aa2.32□□□□□ -2.04
CLK1-208ENST00000464454 CES1P1Q9UKY3 287 aa2.32□□□□□ -2.04
CLK1-208ENST00000464454 S4R3C0 116 aa2.32□□□□□ -2.04
CLK1-208ENST00000464454 BRWD3Q6RI45 1802 aa2.32□□□□□ -2.04
CLK1-208ENST00000464454 IGHV3-49A0A0A0MS15 119 aa2.31□□□□□ -2.04
CLK1-208ENST00000464454 A0A0A6YYD5 115 aa2.31□□□□□ -2.04
CLK1-208ENST00000464454 A0A1W2PRF3 423 aa2.31□□□□□ -2.04
CLK1-208ENST00000464454 A0A1W2PRM7 423 aa2.31□□□□□ -2.04
CLK1-208ENST00000464454 ZNF701M0R085 212 aaPredicted RBP2.31□□□□□ -2.04
CLK1-208ENST00000464454 UPK1BO75841 260 aa2.31□□□□□ -2.04
CLK1-208ENST00000464454 GATBO75879 557 aaKnown RBP2.31□□□□□ -2.04
CLK1-208ENST00000464454 LCA5LO95447 670 aa2.31□□□□□ -2.04
CLK1-208ENST00000464454 CYB5R3P00387 301 aaPredicted RBP2.31□□□□□ -2.04
CLK1-208ENST00000464454 TRBV12-3P01733 135 aa2.31□□□□□ -2.04
CLK1-208ENST00000464454 MBP02144 154 aa2.31□□□□□ -2.04
CLK1-208ENST00000464454 THRAP10827 490 aa2.31□□□□□ -2.04
CLK1-208ENST00000464454 GZMAP12544 262 aa2.31□□□□□ -2.04
CLK1-208ENST00000464454 ARL2P36404 184 aa2.31□□□□□ -2.04
CLK1-208ENST00000464454 PRLHRP49683 370 aa2.31□□□□□ -2.04
CLK1-208ENST00000464454 ZNF616Q08AN1 781 aa2.31□□□□□ -2.04
CLK1-208ENST00000464454 OR1Q1Q15612 314 aa2.31□□□□□ -2.04
CLK1-208ENST00000464454 SLC25A35Q3KQZ1 300 aa2.31□□□□□ -2.04
CLK1-208ENST00000464454 FAM222AQ5U5X8 452 aa2.31□□□□□ -2.04
CLK1-208ENST00000464454 MFSD14CQ5VZR4 134 aa2.31□□□□□ -2.04
CLK1-208ENST00000464454 SLC25A34Q6PIV7 304 aa2.31□□□□□ -2.04
CLK1-208ENST00000464454 IGFL1Q6UW32 110 aa2.31□□□□□ -2.04
CLK1-208ENST00000464454 SLC35D2Q76EJ3 337 aa2.31□□□□□ -2.04
CLK1-208ENST00000464454 OR2W3Q7Z3T1 314 aa2.31□□□□□ -2.04
CLK1-208ENST00000464454 SLC30A8Q8IWU4 369 aa2.31□□□□□ -2.04
CLK1-208ENST00000464454 LYPD1Q8N2G4 141 aa2.31□□□□□ -2.04
CLK1-208ENST00000464454 ZNF321PQ8N8H1 164 aa2.31□□□□□ -2.04
CLK1-208ENST00000464454 TMEM104Q8NE00 496 aa2.31□□□□□ -2.04
CLK1-208ENST00000464454 FBXO36Q8NEA4 188 aa2.31□□□□□ -2.04
CLK1-208ENST00000464454 OR5T1Q8NG75 326 aa2.31□□□□□ -2.04
CLK1-208ENST00000464454 OR10Z1Q8NGY1 313 aa2.31□□□□□ -2.04
CLK1-208ENST00000464454 OR1L1Q8NH94 360 aa2.31□□□□□ -2.04
CLK1-208ENST00000464454 TCP10LQ8TDR4 215 aa2.31□□□□□ -2.04
CLK1-208ENST00000464454 ZNF721Q8TF20 911 aa2.31□□□□□ -2.04
CLK1-208ENST00000464454 KCNS1Q96KK3 526 aa2.31□□□□□ -2.04
CLK1-208ENST00000464454 C18orf15Q96N68 181 aa2.31□□□□□ -2.04
CLK1-208ENST00000464454 RDH12Q96NR8 316 aa2.31□□□□□ -2.04
CLK1-208ENST00000464454 CDX2Q99626 313 aaPredicted RBP2.31□□□□□ -2.04
CLK1-208ENST00000464454 ZNF2Q9BSG1 426 aaPredicted RBP2.31□□□□□ -2.04
CLK1-208ENST00000464454 CHCHD7Q9BUK0 85 aa2.31□□□□□ -2.04
CLK1-208ENST00000464454 SFXN3Q9BWM7 321 aa2.31□□□□□ -2.04
CLK1-208ENST00000464454 ZNF717Q9BY31 904 aaPredicted RBP2.31□□□□□ -2.04
CLK1-208ENST00000464454 TDRD3Q9H7E2 651 aaKnown RBP2.31□□□□□ -2.04
CLK1-208ENST00000464454 FANCEQ9HB96 536 aa2.31□□□□□ -2.04
CLK1-208ENST00000464454 IFNKQ9P0W0 207 aa2.31□□□□□ -2.04
CLK1-208ENST00000464454 ARPC4-TTLL3A0A0A6YYG9 625 aa2.3□□□□□ -2.04
CLK1-208ENST00000464454 A0A0B4J2E0 115 aa2.3□□□□□ -2.04
CLK1-208ENST00000464454 LOC100653049A0A140TA62 436 aa2.3□□□□□ -2.04
CLK1-208ENST00000464454 A0A1W2PPV4 95 aa2.3□□□□□ -2.04
CLK1-208ENST00000464454 LINC01619G3V211 115 aa2.3□□□□□ -2.04
CLK1-208ENST00000464454 MYL12BO14950 172 aa2.3□□□□□ -2.04
CLK1-208ENST00000464454 PSPHP1O15172 72 aa2.3□□□□□ -2.04
CLK1-208ENST00000464454 KRT34O76011 436 aa2.3□□□□□ -2.04
CLK1-208ENST00000464454 KLK1P06870 262 aa2.3□□□□□ -2.04
CLK1-208ENST00000464454 HSPD1P10809 573 aaKnown RBP2.3□□□□□ -2.04
CLK1-208ENST00000464454 PSMB5P28074 263 aa2.3□□□□□ -2.04
CLK1-208ENST00000464454 CFHR2P36980 270 aa2.3□□□□□ -2.04
CLK1-208ENST00000464454 CSKP41240 450 aa2.3□□□□□ -2.04
CLK1-208ENST00000464454 UBE2E1P51965 193 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms