RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 ANKRD30BLA7E2S9 258 aa16.02■□□□□ 0.16
LMNB1-204ENST00000463908 GMDSO60547 372 aa16.02■□□□□ 0.16
LMNB1-204ENST00000463908 CST4P01036 141 aa16.02■□□□□ 0.16
LMNB1-204ENST00000463908 CDK1P06493 297 aa16.02■□□□□ 0.16
LMNB1-204ENST00000463908 HTR1AP08908 422 aa16.02■□□□□ 0.16
LMNB1-204ENST00000463908 CCDC159P0C7I6 412 aa16.02■□□□□ 0.16
LMNB1-204ENST00000463908 ATP6V1B1P15313 513 aa16.02■□□□□ 0.16
LMNB1-204ENST00000463908 TNFSF4P23510 183 aa16.02■□□□□ 0.16
LMNB1-204ENST00000463908 GIFP27352 417 aa16.02■□□□□ 0.16
LMNB1-204ENST00000463908 MAP2K3P46734 347 aa16.02■□□□□ 0.16
LMNB1-204ENST00000463908 SLC35A2P78381 396 aa16.02■□□□□ 0.16
LMNB1-204ENST00000463908 ALKBH1Q13686 389 aaKnown RBP16.02■□□□□ 0.16
LMNB1-204ENST00000463908 DOC2BQ14184 412 aa16.02■□□□□ 0.16
LMNB1-204ENST00000463908 OR8G1Q15617 311 aa16.02■□□□□ 0.16
LMNB1-204ENST00000463908 CARTPTQ16568 116 aa16.02■□□□□ 0.16
LMNB1-204ENST00000463908 XAF1Q6GPH4 301 aa16.02■□□□□ 0.16
LMNB1-204ENST00000463908 STX19Q8N4C7 294 aa16.02■□□□□ 0.16
LMNB1-204ENST00000463908 SEMA6DQ8NFY4 1073 aa16.02■□□□□ 0.16
LMNB1-204ENST00000463908 GATAD2BQ8WXI9 593 aa16.02■□□□□ 0.16
LMNB1-204ENST00000463908 RASSF4Q9H2L5 321 aa16.02■□□□□ 0.16
LMNB1-204ENST00000463908 SCN3BQ9NY72 215 aa16.02■□□□□ 0.16
LMNB1-204ENST00000463908 ERVK-18Q9QC07 812 aa16.02■□□□□ 0.16
LMNB1-204ENST00000463908 SIRT4Q9Y6E7 314 aaPredicted RBP16.02■□□□□ 0.16
LMNB1-204ENST00000463908 V9GYS6 101 aa16.02■□□□□ 0.16
LMNB1-204ENST00000463908 CHD3Q12873 2000 aaKnown RBP16.01■□□□□ 0.15
LMNB1-204ENST00000463908 A0A096LNT2 108 aa16.01■□□□□ 0.15
LMNB1-204ENST00000463908 LOC100289279A0A1B0GTE1 492 aa16.01■□□□□ 0.15
LMNB1-204ENST00000463908 H3BSH0 61 aa16.01■□□□□ 0.15
LMNB1-204ENST00000463908 LMX1BO60663 402 aa16.01■□□□□ 0.15
LMNB1-204ENST00000463908 DHRS3O75911 302 aa16.01■□□□□ 0.15
LMNB1-204ENST00000463908 LALBAP00709 142 aa16.01■□□□□ 0.15
LMNB1-204ENST00000463908 CSF3P09919 207 aa16.01■□□□□ 0.15
LMNB1-204ENST00000463908 MYL12AP19105 171 aa16.01■□□□□ 0.15
LMNB1-204ENST00000463908 ACHEP22303 614 aa16.01■□□□□ 0.15
LMNB1-204ENST00000463908 CRHBPP24387 322 aa16.01■□□□□ 0.15
LMNB1-204ENST00000463908 PMELP40967 661 aa16.01■□□□□ 0.15
LMNB1-204ENST00000463908 CD200P41217 278 aa16.01■□□□□ 0.15
LMNB1-204ENST00000463908 RIPPLY1Q0D2K3 151 aa16.01■□□□□ 0.15
LMNB1-204ENST00000463908 KRTAP21-3Q3LHN1 58 aa16.01■□□□□ 0.15
LMNB1-204ENST00000463908 TMPRSS11AQ6ZMR5 421 aa16.01■□□□□ 0.15
LMNB1-204ENST00000463908 DOK3Q7L591 496 aa16.01■□□□□ 0.15
LMNB1-204ENST00000463908 COMMD2Q86X83 199 aa16.01■□□□□ 0.15
LMNB1-204ENST00000463908 KLBQ86Z14 1044 aa16.01■□□□□ 0.15
LMNB1-204ENST00000463908 KLHL36Q8N4N3 616 aa16.01■□□□□ 0.15
LMNB1-204ENST00000463908 PIGCQ92535 297 aa16.01■□□□□ 0.15
LMNB1-204ENST00000463908 ITFG2Q969R8 447 aa16.01■□□□□ 0.15
LMNB1-204ENST00000463908 TMUB1Q9BVT8 246 aa16.01■□□□□ 0.15
LMNB1-204ENST00000463908 FGF23Q9GZV9 251 aaPredicted RBP16.01■□□□□ 0.15
LMNB1-204ENST00000463908 GCM1Q9NP62 436 aa16.01■□□□□ 0.15
LMNB1-204ENST00000463908 ZNF275Q9NSD4 429 aaPredicted RBP16.01■□□□□ 0.15
LMNB1-204ENST00000463908 DCAF16Q9NXF7 216 aa16.01■□□□□ 0.15
LMNB1-204ENST00000463908 BABAM2Q9NXR7 383 aa16.01■□□□□ 0.15
LMNB1-204ENST00000463908 PIGLQ9Y2B2 252 aa16.01■□□□□ 0.15
LMNB1-204ENST00000463908 DNHD1Q96M86 4753 aa16.01■□□□□ 0.15
LMNB1-204ENST00000463908 A6NIN4 97 aa16■□□□□ 0.15
LMNB1-204ENST00000463908 ZNF850A8MQ14 1090 aa16■□□□□ 0.15
LMNB1-204ENST00000463908 RNF223E7ERA6 249 aa16■□□□□ 0.15
LMNB1-204ENST00000463908 NDUFS8O00217 210 aa16■□□□□ 0.15
LMNB1-204ENST00000463908 PTBP3O95758 552 aaKnown RBP16■□□□□ 0.15
LMNB1-204ENST00000463908 ISG15P05161 165 aa16■□□□□ 0.15
LMNB1-204ENST00000463908 TNFRSF1AP19438 455 aa16■□□□□ 0.15
LMNB1-204ENST00000463908 TGM4P49221 684 aa16■□□□□ 0.15
LMNB1-204ENST00000463908 GBX2P52951 348 aaPredicted RBP16■□□□□ 0.15
LMNB1-204ENST00000463908 TMEM33P57088 247 aa16■□□□□ 0.15
LMNB1-204ENST00000463908 RNLSQ5VYX0 342 aa16■□□□□ 0.15
LMNB1-204ENST00000463908 NANOGP1Q8N7R0 232 aa16■□□□□ 0.15
LMNB1-204ENST00000463908 OR52N1Q8NH53 320 aa16■□□□□ 0.15
LMNB1-204ENST00000463908 CCL17Q92583 94 aa16■□□□□ 0.15
LMNB1-204ENST00000463908 MYDGFQ969H8 173 aa16■□□□□ 0.15
LMNB1-204ENST00000463908 ADAT1Q9BUB4 502 aaKnown RBP16■□□□□ 0.15
LMNB1-204ENST00000463908 REG4Q9BYZ8 158 aa16■□□□□ 0.15
LMNB1-204ENST00000463908 CHODLQ9H9P2 273 aa16■□□□□ 0.15
LMNB1-204ENST00000463908 DLL4Q9NR61 685 aa16■□□□□ 0.15
LMNB1-204ENST00000463908 CHCHD3Q9NX63 227 aaKnown RBP16■□□□□ 0.15
LMNB1-204ENST00000463908 TPRKBQ9Y3C4 175 aa16■□□□□ 0.15
LMNB1-204ENST00000463908 ZNF816-ZNF321PA0A0X1KG74 233 aa15.99■□□□□ 0.15
LMNB1-204ENST00000463908 H7C1Q1 480 aa15.99■□□□□ 0.15
LMNB1-204ENST00000463908 OGG1O15527 345 aa15.99■□□□□ 0.15
LMNB1-204ENST00000463908 SYT7O43581 403 aa15.99■□□□□ 0.15
LMNB1-204ENST00000463908 MTRF1O75570 445 aaKnown RBP15.99■□□□□ 0.15
LMNB1-204ENST00000463908 ZFPL1O95159 310 aa15.99■□□□□ 0.15
LMNB1-204ENST00000463908 FAHP16930 419 aa15.99■□□□□ 0.15
LMNB1-204ENST00000463908 NR4A2P43354 598 aa15.99■□□□□ 0.15
LMNB1-204ENST00000463908 GATA4P43694 442 aa15.99■□□□□ 0.15
LMNB1-204ENST00000463908 SRP9P49458 86 aaKnown RBP15.99■□□□□ 0.15
LMNB1-204ENST00000463908 MRPL28Q13084 256 aaKnown RBP15.99■□□□□ 0.15
LMNB1-204ENST00000463908 PRDX4Q13162 271 aa15.99■□□□□ 0.15
LMNB1-204ENST00000463908 MPPED2Q15777 294 aa15.99■□□□□ 0.15
LMNB1-204ENST00000463908 HFEQ30201 348 aa15.99■□□□□ 0.15
LMNB1-204ENST00000463908 DMRTC1Q5HYR2 192 aa15.99■□□□□ 0.15
LMNB1-204ENST00000463908 ZBTB37Q5TC79 503 aa15.99■□□□□ 0.15
LMNB1-204ENST00000463908 TMEM244Q5VVB8 128 aa15.99■□□□□ 0.15
LMNB1-204ENST00000463908 PRAMEF6Q5VXH4 476 aa15.99■□□□□ 0.15
LMNB1-204ENST00000463908 WDR86Q86TI4 376 aa15.99■□□□□ 0.15
LMNB1-204ENST00000463908 CELF2-AS1Q8N7Q2 184 aa15.99■□□□□ 0.15
LMNB1-204ENST00000463908 OR10AC1Q8NH08 325 aa15.99■□□□□ 0.15
LMNB1-204ENST00000463908 ZNF420Q8TAQ5 688 aaPredicted RBP15.99■□□□□ 0.15
LMNB1-204ENST00000463908 OR5P3Q8WZ94 311 aa15.99■□□□□ 0.15
LMNB1-204ENST00000463908 ITPKCQ96DU7 683 aa15.99■□□□□ 0.15
LMNB1-204ENST00000463908 PAPOLGQ9BWT3 736 aaKnown RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms