RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 TEX36Q5VZQ5 186 aa15.63■□□□□ 0.09
SF3A1-205ENST00000463818 C16orf87Q6PH81 154 aa15.63■□□□□ 0.09
SF3A1-205ENST00000463818 SHISA2Q6UWI4 295 aa15.63■□□□□ 0.09
SF3A1-205ENST00000463818 LRRC29Q8WV35 223 aa15.63■□□□□ 0.09
SF3A1-205ENST00000463818 TAF15Q92804 592 aaKnown RBP eCLIP15.63■□□□□ 0.09
SF3A1-205ENST00000463818 CADM1Q9BY67 442 aaKnown RBP15.63■□□□□ 0.09
SF3A1-205ENST00000463818 PRDM13Q9H4Q3 707 aa15.63■□□□□ 0.09
SF3A1-205ENST00000463818 ZNF556Q9HAH1 456 aa15.63■□□□□ 0.09
SF3A1-205ENST00000463818 DOCK11Q5JSL3 2073 aa15.63■□□□□ 0.09
SF3A1-205ENST00000463818 DVL1O14640 695 aa15.62■□□□□ 0.09
SF3A1-205ENST00000463818 HOXA3O43365 443 aaPredicted RBP15.62■□□□□ 0.09
SF3A1-205ENST00000463818 SELENOFO60613 162 aa15.62■□□□□ 0.09
SF3A1-205ENST00000463818 FCN3O75636 299 aa15.62■□□□□ 0.09
SF3A1-205ENST00000463818 TOX4O94842 621 aa15.62■□□□□ 0.09
SF3A1-205ENST00000463818 OSMP13725 252 aa15.62■□□□□ 0.09
SF3A1-205ENST00000463818 MMP9P14780 707 aa15.62■□□□□ 0.09
SF3A1-205ENST00000463818 CSNK2BP67870 215 aa15.62■□□□□ 0.09
SF3A1-205ENST00000463818 CDK5Q00535 292 aa15.62■□□□□ 0.09
SF3A1-205ENST00000463818 BTN2A1Q7KYR7 527 aa15.62■□□□□ 0.09
SF3A1-205ENST00000463818 CPOQ8IVL8 374 aa15.62■□□□□ 0.09
SF3A1-205ENST00000463818 HS3ST5Q8IZT8 346 aa15.62■□□□□ 0.09
SF3A1-205ENST00000463818 ZNF454Q8N9F8 522 aa15.62■□□□□ 0.09
SF3A1-205ENST00000463818 PNLDC1Q8NA58 520 aaKnown RBP15.62■□□□□ 0.09
SF3A1-205ENST00000463818 CSNK2A3Q8NEV1 391 aa15.62■□□□□ 0.09
SF3A1-205ENST00000463818 OTOSQ8NHW6 89 aa15.62■□□□□ 0.09
SF3A1-205ENST00000463818 TBX15Q96SF7 602 aa15.62■□□□□ 0.09
SF3A1-205ENST00000463818 UNKLQ9H9P5 680 aaKnown RBP15.62■□□□□ 0.09
SF3A1-205ENST00000463818 KAAG1Q9UBP8 84 aa15.62■□□□□ 0.09
SF3A1-205ENST00000463818 CENPVL3A0A0U1RRI6 287 aa15.61■□□□□ 0.09
SF3A1-205ENST00000463818 E2F6O75461 281 aa15.61■□□□□ 0.09
SF3A1-205ENST00000463818 ECDO95905 644 aaPredicted RBP15.61■□□□□ 0.09
SF3A1-205ENST00000463818 LYNP07948 512 aa15.61■□□□□ 0.09
SF3A1-205ENST00000463818 GNALP38405 381 aa15.61■□□□□ 0.09
SF3A1-205ENST00000463818 ARF6P62330 175 aa15.61■□□□□ 0.09
SF3A1-205ENST00000463818 ELF3P78545 371 aaPredicted RBP15.61■□□□□ 0.09
SF3A1-205ENST00000463818 IL13RA1P78552 427 aa15.61■□□□□ 0.09
SF3A1-205ENST00000463818 MICBQ29980 383 aa15.61■□□□□ 0.09
SF3A1-205ENST00000463818 RUSC1-AS1Q66K80 236 aa15.61■□□□□ 0.09
SF3A1-205ENST00000463818 WDR82Q6UXN9 313 aa15.61■□□□□ 0.09
SF3A1-205ENST00000463818 WDFY2Q96P53 400 aa15.61■□□□□ 0.09
SF3A1-205ENST00000463818 CCL13Q99616 98 aa15.61■□□□□ 0.09
SF3A1-205ENST00000463818 PAPOLGQ9BWT3 736 aaKnown RBP15.61■□□□□ 0.09
SF3A1-205ENST00000463818 RGCCQ9H4X1 137 aa15.61■□□□□ 0.09
SF3A1-205ENST00000463818 KIF17Q9P2E2 1029 aa15.61■□□□□ 0.09
SF3A1-205ENST00000463818 POMPQ9Y244 141 aa15.61■□□□□ 0.09
SF3A1-205ENST00000463818 CDIPTO14735 213 aa15.6■□□□□ 0.09
SF3A1-205ENST00000463818 TMPRSS2O15393 492 aa15.6■□□□□ 0.09
SF3A1-205ENST00000463818 TIPRLO75663 272 aa15.6■□□□□ 0.09
SF3A1-205ENST00000463818 ANXA8P13928 327 aa15.6■□□□□ 0.09
SF3A1-205ENST00000463818 MUC1P15941 1255 aaPredicted RBP15.6■□□□□ 0.09
SF3A1-205ENST00000463818 NAA10P41227 235 aaPredicted RBP15.6■□□□□ 0.09
SF3A1-205ENST00000463818 METTL11BQ5VVY1 283 aa15.6■□□□□ 0.09
SF3A1-205ENST00000463818 TMEM236Q5W0B7 351 aa15.6■□□□□ 0.09
SF3A1-205ENST00000463818 SPATA24Q86W54 205 aa15.6■□□□□ 0.09
SF3A1-205ENST00000463818 GALNT4Q8N4A0 578 aa15.6■□□□□ 0.09
SF3A1-205ENST00000463818 BBS1Q8NFJ9 593 aa15.6■□□□□ 0.09
SF3A1-205ENST00000463818 ST8SIA4Q92187 359 aa15.6■□□□□ 0.09
SF3A1-205ENST00000463818 SEH1LQ96EE3 360 aa15.6■□□□□ 0.09
SF3A1-205ENST00000463818 MICU1Q9BPX6 476 aa15.6■□□□□ 0.09
SF3A1-205ENST00000463818 CNTD2Q9H8S5 307 aa15.6■□□□□ 0.09
SF3A1-205ENST00000463818 NOX4Q9NPH5 578 aa15.6■□□□□ 0.09
SF3A1-205ENST00000463818 TNFRSF19Q9NS68 423 aa15.6■□□□□ 0.09
SF3A1-205ENST00000463818 TCRBV3S1A0A5B6 114 aa15.59■□□□□ 0.09
SF3A1-205ENST00000463818 ANXA2P2A6NMY6 339 aa15.59■□□□□ 0.09
SF3A1-205ENST00000463818 POM121CA8CG34 1229 aa15.59■□□□□ 0.09
SF3A1-205ENST00000463818 PRODHO43272 600 aa15.59■□□□□ 0.09
SF3A1-205ENST00000463818 RPS7P62081 194 aaKnown RBP15.59■□□□□ 0.09
SF3A1-205ENST00000463818 CBX1P83916 185 aa15.59■□□□□ 0.09
SF3A1-205ENST00000463818 IL5RAQ01344 420 aa15.59■□□□□ 0.09
SF3A1-205ENST00000463818 SNCBQ16143 134 aa15.59■□□□□ 0.09
SF3A1-205ENST00000463818 C11orf91Q3C1V1 193 aa15.59■□□□□ 0.09
SF3A1-205ENST00000463818 Q6YL49 198 aa15.59■□□□□ 0.09
SF3A1-205ENST00000463818 FGFRL1Q8N441 504 aa15.59■□□□□ 0.09
SF3A1-205ENST00000463818 TMIGD2Q96BF3 282 aa15.59■□□□□ 0.09
SF3A1-205ENST00000463818 ITPKCQ96DU7 683 aa15.59■□□□□ 0.09
SF3A1-205ENST00000463818 SIRPDQ9H106 197 aa15.59■□□□□ 0.09
SF3A1-205ENST00000463818 TLNRD1Q9H1K6 362 aa15.59■□□□□ 0.09
SF3A1-205ENST00000463818 YY1AP1Q9H869 796 aa15.59■□□□□ 0.09
SF3A1-205ENST00000463818 DNAJB9Q9UBS3 223 aa15.59■□□□□ 0.09
SF3A1-205ENST00000463818 KLHDC2Q9Y2U9 406 aa15.59■□□□□ 0.09
SF3A1-205ENST00000463818 MPC1Q9Y5U8 109 aa15.59■□□□□ 0.09
SF3A1-205ENST00000463818 A0A1B0GW55 424 aa15.58■□□□□ 0.08
SF3A1-205ENST00000463818 ZNF850A8MQ14 1090 aa15.58■□□□□ 0.08
SF3A1-205ENST00000463818 SRRM5B3KS81 715 aa15.58■□□□□ 0.08
SF3A1-205ENST00000463818 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.58■□□□□ 0.08
SF3A1-205ENST00000463818 FKBP6O75344 327 aa15.58■□□□□ 0.08
SF3A1-205ENST00000463818 DUX4L2P0CJ85 424 aa15.58■□□□□ 0.08
SF3A1-205ENST00000463818 DUX4L3P0CJ86 424 aa15.58■□□□□ 0.08
SF3A1-205ENST00000463818 DUX4L4P0CJ87 422 aa15.58■□□□□ 0.08
SF3A1-205ENST00000463818 DUX4L5P0CJ88 424 aa15.58■□□□□ 0.08
SF3A1-205ENST00000463818 DUX4L6P0CJ89 424 aa15.58■□□□□ 0.08
SF3A1-205ENST00000463818 DUX4L7P0CJ90 424 aa15.58■□□□□ 0.08
SF3A1-205ENST00000463818 ALOX5APP20292 161 aa15.58■□□□□ 0.08
SF3A1-205ENST00000463818 OMGP23515 440 aa15.58■□□□□ 0.08
SF3A1-205ENST00000463818 ACKR3P25106 362 aa15.58■□□□□ 0.08
SF3A1-205ENST00000463818 HCCSP53701 268 aa15.58■□□□□ 0.08
SF3A1-205ENST00000463818 PRDX4Q13162 271 aa15.58■□□□□ 0.08
SF3A1-205ENST00000463818 FLOT2Q14254 428 aa15.58■□□□□ 0.08
SF3A1-205ENST00000463818 PDCD1Q15116 288 aa15.58■□□□□ 0.08
SF3A1-205ENST00000463818 WDR38Q5JTN6 314 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms