RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 ZFAND2BQ8WV99 257 aa3.08□□□□□ -1.92
SCFD1-204ENST00000463622 C11orf40Q8WZ69 217 aa3.08□□□□□ -1.92
SCFD1-204ENST00000463622 HIST1H2ACQ93077 130 aa3.08□□□□□ -1.92
SCFD1-204ENST00000463622 OTULINQ96BN8 352 aa3.08□□□□□ -1.92
SCFD1-204ENST00000463622 LGALS12Q96DT0 336 aa3.08□□□□□ -1.92
SCFD1-204ENST00000463622 TBX5Q99593 518 aa3.08□□□□□ -1.92
SCFD1-204ENST00000463622 NAA11Q9BSU3 229 aaPredicted RBP3.08□□□□□ -1.92
SCFD1-204ENST00000463622 HDHD5Q9BXW7 423 aa3.08□□□□□ -1.92
SCFD1-204ENST00000463622 PRRG4Q9BZD6 226 aa3.08□□□□□ -1.92
SCFD1-204ENST00000463622 OR10A4Q9H209 315 aa3.08□□□□□ -1.92
SCFD1-204ENST00000463622 RERGLQ9H628 205 aa3.08□□□□□ -1.92
SCFD1-204ENST00000463622 ADGRL4Q9HBW9 690 aa3.08□□□□□ -1.92
SCFD1-204ENST00000463622 KRCC1Q9NPI7 259 aaPredicted RBP3.08□□□□□ -1.92
SCFD1-204ENST00000463622 PNRC2Q9NPJ4 139 aaKnown RBP3.08□□□□□ -1.92
SCFD1-204ENST00000463622 PLSCR4Q9NRQ2 329 aa3.08□□□□□ -1.92
SCFD1-204ENST00000463622 FKBP14Q9NWM8 211 aa3.08□□□□□ -1.92
SCFD1-204ENST00000463622 ERVK-18Q9QC07 812 aa3.08□□□□□ -1.92
SCFD1-204ENST00000463622 GRHPRQ9UBQ7 328 aa3.08□□□□□ -1.92
SCFD1-204ENST00000463622 CLEC2DQ9UHP7 191 aa3.08□□□□□ -1.92
SCFD1-204ENST00000463622 MCTS1Q9ULC4 181 aaKnown RBP3.08□□□□□ -1.92
SCFD1-204ENST00000463622 NOSIPQ9Y314 301 aaKnown RBP3.08□□□□□ -1.92
SCFD1-204ENST00000463622 COMMD3-BMI1R4GMX3 469 aa3.08□□□□□ -1.92
SCFD1-204ENST00000463622 SVEP1Q4LDE5 3571 aa3.08□□□□□ -1.92
SCFD1-204ENST00000463622 MED12LQ86YW9 2145 aa3.08□□□□□ -1.92
SCFD1-204ENST00000463622 DOCK7Q96N67 2140 aa3.08□□□□□ -1.92
SCFD1-204ENST00000463622 FREM1Q5H8C1 2179 aa3.08□□□□□ -1.92
SCFD1-204ENST00000463622 A0A1W2PRG6 482 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 NPIPB13A6NJU9 1138 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 NPIPB4C9JG80 1138 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 E9PI62 339 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 DOK2O60496 412 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 LYZL6O75951 148 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 LALBAP00709 142 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 MT-ND2P03891 347 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 YES1P07947 543 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 IGHV4-31P0DP07 118 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 DBTP11182 482 aaKnown RBP3.07□□□□□ -1.92
SCFD1-204ENST00000463622 B4GALT1P15291 398 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 CDH2P19022 906 aaPredicted RBP3.07□□□□□ -1.92
SCFD1-204ENST00000463622 CRHBPP24387 322 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 FKBP2P26885 142 aaKnown RBP3.07□□□□□ -1.92
SCFD1-204ENST00000463622 TNFSF8P32971 234 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 MAP2K4P45985 399 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 OR3A2P47893 321 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 CSNK1A1P48729 337 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 DAP3P51398 398 aaKnown RBP3.07□□□□□ -1.92
SCFD1-204ENST00000463622 SLC25A1P53007 311 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 CDH11P55287 796 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 ARF1P84077 181 aaKnown RBP3.07□□□□□ -1.92
SCFD1-204ENST00000463622 ROR2Q01974 943 aaKnown RBP3.07□□□□□ -1.92
SCFD1-204ENST00000463622 HIKESHIQ53FT3 197 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 FAM120AOSQ5T036 256 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 PDSS1Q5T2R2 415 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 NXNL2Q5VZ03 156 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 TTC23Q5W5X9 447 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 GPR139Q6DWJ6 353 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 XAF1Q6GPH4 301 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 RPL13AP3Q6NVV1 102 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 C12orf54Q6X4T0 127 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 STAC2Q6ZMT1 411 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 CFAP77Q6ZQR2 320 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 FOXL2NBQ6ZUU3 175 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 AHSA2Q719I0 299 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 KLBQ86Z14 1044 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 CADM3Q8N126 398 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 GABRG1Q8N1C3 465 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 ZNF786Q8N393 782 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 SLC26A10Q8NG04 563 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 OR51G2Q8NGK0 314 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 OR52I1Q8NGK6 324 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 OR8J1Q8NGP2 316 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 OR6N1Q8NGY5 312 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 SLC7A6Q92536 515 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 FBXO17Q96EF6 278 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 ZHX1-C8orf76Q96EF9 292 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 RNFT2Q96EX2 444 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 SLC25A44Q96H78 314 aaPredicted RBP3.07□□□□□ -1.92
SCFD1-204ENST00000463622 ZC3HAV1LQ96H79 300 aaKnown RBP3.07□□□□□ -1.92
SCFD1-204ENST00000463622 GMPPAQ96IJ6 420 aaPredicted RBP3.07□□□□□ -1.92
SCFD1-204ENST00000463622 TEAD3Q99594 435 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 SH3GL3Q99963 347 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 TRAF4Q9BUZ4 470 aaPredicted RBP3.07□□□□□ -1.92
SCFD1-204ENST00000463622 ALG12Q9BV10 488 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 ULBP2Q9BZM5 246 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 CRLF2Q9HC73 371 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 C8orf4Q9NR00 106 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 POLE4Q9NR33 117 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 IMPAD1Q9NX62 359 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 GLTPQ9NZD2 209 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 KLHL9Q9P2J3 617 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 PSORS1C1Q9UIG5 152 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 KCNG2Q9UJ96 466 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 RCE1Q9Y256 329 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 GRIP1Q9Y3R0 1128 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 ORC6Q9Y5N6 252 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 LHFPL6Q9Y693 200 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 RAI1Q7Z5J4 1906 aaPredicted RBP3.07□□□□□ -1.92
SCFD1-204ENST00000463622 TMEM89A2RUT3 159 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 HTR3EA5X5Y0 456 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 RIIAD1A6NNX1 92 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms