RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 FAPQ12884 760 aa11.16□□□□□ -0.62
VAPB-203ENST00000463370 CDNFQ49AH0 187 aa11.16□□□□□ -0.62
VAPB-203ENST00000463370 NOXA1Q86UR1 476 aa11.16□□□□□ -0.62
VAPB-203ENST00000463370 GABRG1Q8N1C3 465 aa11.16□□□□□ -0.62
VAPB-203ENST00000463370 GVQW1Q8N7I0 195 aa11.16□□□□□ -0.62
VAPB-203ENST00000463370 OR10K1Q8NGX5 313 aa11.16□□□□□ -0.62
VAPB-203ENST00000463370 NUDCD2Q8WVJ2 157 aa11.16□□□□□ -0.62
VAPB-203ENST00000463370 SEC22CQ9BRL7 303 aa11.16□□□□□ -0.62
VAPB-203ENST00000463370 SELENOIQ9C0D9 397 aa11.16□□□□□ -0.62
VAPB-203ENST00000463370 C12orf49Q9H741 205 aa11.16□□□□□ -0.62
VAPB-203ENST00000463370 PARPBPQ9NWS1 579 aa11.16□□□□□ -0.62
VAPB-203ENST00000463370 PRSS50Q9UI38 385 aa11.16□□□□□ -0.62
VAPB-203ENST00000463370 A0A0A6YYH2 397 aa11.15□□□□□ -0.62
VAPB-203ENST00000463370 A6NJ64 397 aa11.15□□□□□ -0.62
VAPB-203ENST00000463370 ZNF587BE7ETH6 402 aa11.15□□□□□ -0.62
VAPB-203ENST00000463370 SOCS1O15524 211 aa11.15□□□□□ -0.62
VAPB-203ENST00000463370 EFSO43281 561 aa11.15□□□□□ -0.62
VAPB-203ENST00000463370 CDC14BO60729 498 aa11.15□□□□□ -0.62
VAPB-203ENST00000463370 NDUFB6O95139 128 aa11.15□□□□□ -0.62
VAPB-203ENST00000463370 APOC1P02654 83 aa11.15□□□□□ -0.62
VAPB-203ENST00000463370 ZNF92Q03936 586 aa11.15□□□□□ -0.62
VAPB-203ENST00000463370 PLAC9Q5JTB6 97 aa11.15□□□□□ -0.62
VAPB-203ENST00000463370 STEAP1BQ6NZ63 245 aa11.15□□□□□ -0.62
VAPB-203ENST00000463370 ZNF782Q6ZMW2 699 aaPredicted RBP11.15□□□□□ -0.62
VAPB-203ENST00000463370 FJX1Q86VR8 437 aa11.15□□□□□ -0.62
VAPB-203ENST00000463370 APH1AQ96BI3 265 aa11.15□□□□□ -0.62
VAPB-203ENST00000463370 TINAGL1Q9GZM7 467 aaPredicted RBP11.15□□□□□ -0.62
VAPB-203ENST00000463370 FREM1Q5H8C1 2179 aa11.15□□□□□ -0.62
VAPB-203ENST00000463370 BSNQ9UPA5 3926 aa11.15□□□□□ -0.62
VAPB-203ENST00000463370 LOC100509620A0A075B734 347 aa11.14□□□□□ -0.63
VAPB-203ENST00000463370 RPL36A-HNRNPH2H7BZ11 118 aa11.14□□□□□ -0.63
VAPB-203ENST00000463370 CRTAPO75718 401 aaPredicted RBP11.14□□□□□ -0.63
VAPB-203ENST00000463370 FARS2O95363 451 aaKnown RBP11.14□□□□□ -0.63
VAPB-203ENST00000463370 FCGR2AP12318 317 aa11.14□□□□□ -0.63
VAPB-203ENST00000463370 EDN3P14138 238 aa11.14□□□□□ -0.63
VAPB-203ENST00000463370 STOMP27105 288 aa11.14□□□□□ -0.63
VAPB-203ENST00000463370 PCBD1P61457 104 aa11.14□□□□□ -0.63
VAPB-203ENST00000463370 IGFL2Q6UWQ7 119 aa11.14□□□□□ -0.63
VAPB-203ENST00000463370 SEMA6DQ8NFY4 1073 aa11.14□□□□□ -0.63
VAPB-203ENST00000463370 PP6455Q8WZ26 134 aa11.14□□□□□ -0.63
VAPB-203ENST00000463370 ACTR6Q9GZN1 396 aa11.14□□□□□ -0.63
VAPB-203ENST00000463370 ING3Q9NXR8 418 aa11.14□□□□□ -0.63
VAPB-203ENST00000463370 TAS2R8Q9NYW2 309 aa11.14□□□□□ -0.63
VAPB-203ENST00000463370 FBLN5Q9UBX5 448 aa11.14□□□□□ -0.63
VAPB-203ENST00000463370 KCNK7Q9Y2U2 307 aa11.14□□□□□ -0.63
VAPB-203ENST00000463370 DMXL2Q8TDJ6 3036 aa11.14□□□□□ -0.63
VAPB-203ENST00000463370 AKAIN1P0CW23 69 aa11.14□□□□□ -0.63
VAPB-203ENST00000463370 CPN1P15169 458 aa11.14□□□□□ -0.63
VAPB-203ENST00000463370 PTGFRP43088 359 aa11.14□□□□□ -0.63
VAPB-203ENST00000463370 TMEM50BP56557 158 aa11.14□□□□□ -0.63
VAPB-203ENST00000463370 ZP1P60852 638 aa11.14□□□□□ -0.63
VAPB-203ENST00000463370 RNPS1Q15287 305 aaKnown RBP11.14□□□□□ -0.63
VAPB-203ENST00000463370 SF3B4Q15427 424 aaKnown RBP eCLIP11.14□□□□□ -0.633e-8■■■□□ 15.6
VAPB-203ENST00000463370 Q5BKY6 102 aa11.14□□□□□ -0.63
VAPB-203ENST00000463370 CHMP1BQ7LBR1 199 aa11.14□□□□□ -0.63
VAPB-203ENST00000463370 OR10R2Q8NGX6 335 aa11.14□□□□□ -0.63
VAPB-203ENST00000463370 GINS4Q9BRT9 223 aa11.14□□□□□ -0.63
VAPB-203ENST00000463370 RNF122Q9H9V4 155 aa11.14□□□□□ -0.63
VAPB-203ENST00000463370 UPB1Q9UBR1 384 aa11.14□□□□□ -0.63
VAPB-203ENST00000463370 PTPRBP23467 1997 aa11.14□□□□□ -0.63
VAPB-203ENST00000463370 IGKV1-27A0A075B6S5 117 aa11.13□□□□□ -0.63
VAPB-203ENST00000463370 SULT1C2O00338 296 aa11.13□□□□□ -0.63
VAPB-203ENST00000463370 SSX5O60225 188 aa11.13□□□□□ -0.63
VAPB-203ENST00000463370 MTRF1O75570 445 aaKnown RBP11.13□□□□□ -0.63
VAPB-203ENST00000463370 CAPZA1P52907 286 aa11.13□□□□□ -0.63
VAPB-203ENST00000463370 ACTBP60709 375 aa11.13□□□□□ -0.63
VAPB-203ENST00000463370 ACTG1P63261 375 aa11.13□□□□□ -0.63
VAPB-203ENST00000463370 MRPS15P82914 257 aaKnown RBP11.13□□□□□ -0.63
VAPB-203ENST00000463370 NRN1LQ496H8 165 aa11.13□□□□□ -0.63
VAPB-203ENST00000463370 OR52W1Q6IF63 320 aa11.13□□□□□ -0.63
VAPB-203ENST00000463370 RAB12Q6IQ22 244 aa11.13□□□□□ -0.63
VAPB-203ENST00000463370 ASCL5Q7RTU5 278 aa11.13□□□□□ -0.63
VAPB-203ENST00000463370 TRAPPC6BQ86SZ2 158 aa11.13□□□□□ -0.63
VAPB-203ENST00000463370 MCEMP1Q8IX19 187 aa11.13□□□□□ -0.63
VAPB-203ENST00000463370 CDH26Q8IXH8 852 aa11.13□□□□□ -0.63
VAPB-203ENST00000463370 ZNF100Q8IYN0 542 aa11.13□□□□□ -0.63
VAPB-203ENST00000463370 OR52B4Q8NGK2 314 aa11.13□□□□□ -0.63
VAPB-203ENST00000463370 TNFAIP8L1Q8WVP5 186 aa11.13□□□□□ -0.63
VAPB-203ENST00000463370 SCPEP1Q9HB40 452 aa11.13□□□□□ -0.63
VAPB-203ENST00000463370 ZNF222Q9UK12 451 aa11.13□□□□□ -0.63
VAPB-203ENST00000463370 SLC22A20A6NK97 555 aa11.13□□□□□ -0.63
VAPB-203ENST00000463370 CDK2AP1O14519 115 aa11.13□□□□□ -0.63
VAPB-203ENST00000463370 FABP7O15540 132 aa11.13□□□□□ -0.63
VAPB-203ENST00000463370 SSNA1O43805 119 aa11.13□□□□□ -0.63
VAPB-203ENST00000463370 RAD51DO75771 328 aa11.13□□□□□ -0.63
VAPB-203ENST00000463370 VSIG10L2P0DP72 767 aa11.13□□□□□ -0.63
VAPB-203ENST00000463370 NAT2P11245 290 aa11.13□□□□□ -0.63
VAPB-203ENST00000463370 ZNF24P17028 368 aa11.13□□□□□ -0.63
VAPB-203ENST00000463370 CCNOP22674 350 aa11.13□□□□□ -0.63
VAPB-203ENST00000463370 AGTR1P30556 359 aa11.13□□□□□ -0.63
VAPB-203ENST00000463370 RCVRNP35243 200 aa11.13□□□□□ -0.63
VAPB-203ENST00000463370 FAM3AP98173 230 aa11.13□□□□□ -0.63
VAPB-203ENST00000463370 MAB21L1Q13394 359 aa11.13□□□□□ -0.63
VAPB-203ENST00000463370 CD276Q5ZPR3 534 aa11.13□□□□□ -0.63
VAPB-203ENST00000463370 KCNG3Q8TAE7 436 aa11.13□□□□□ -0.63
VAPB-203ENST00000463370 TMEM59Q9BXS4 323 aa11.13□□□□□ -0.63
VAPB-203ENST00000463370 CHST6Q9GZX3 395 aa11.13□□□□□ -0.63
VAPB-203ENST00000463370 MOV10Q9HCE1 1003 aaKnown RBP11.13□□□□□ -0.63
VAPB-203ENST00000463370 ING4Q9UNL4 249 aa11.13□□□□□ -0.63
VAPB-203ENST00000463370 DSPP15924 2871 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms