RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 TTTY10Q9BZA0 68 aa8.48□□□□□ -1.05
SF3A3-204ENST00000462258 YIPF3Q9GZM5 350 aa8.48□□□□□ -1.05
SF3A3-204ENST00000462258 NIPAL2Q9H841 368 aa8.48□□□□□ -1.05
SF3A3-204ENST00000462258 ENOPH1Q9UHY7 261 aa8.48□□□□□ -1.05
SF3A3-204ENST00000462258 ZNF391Q9UJN7 358 aa8.48□□□□□ -1.05
SF3A3-204ENST00000462258 NUP50Q9UKX7 468 aa8.48□□□□□ -1.05
SF3A3-204ENST00000462258 AP4S1Q9Y587 144 aa8.48□□□□□ -1.05
SF3A3-204ENST00000462258 ZAR1LA6NP61 321 aa8.47□□□□□ -1.05
SF3A3-204ENST00000462258 PRR32B1ATL7 298 aa8.47□□□□□ -1.05
SF3A3-204ENST00000462258 C22orf46C9J442 243 aa8.47□□□□□ -1.05
SF3A3-204ENST00000462258 PSMD9O00233 223 aa8.47□□□□□ -1.05
SF3A3-204ENST00000462258 ADAM20O43506 726 aa8.47□□□□□ -1.05
SF3A3-204ENST00000462258 ENSAO43768 121 aaKnown RBP8.47□□□□□ -1.05
SF3A3-204ENST00000462258 PPIAL4GP0DN37 164 aa8.47□□□□□ -1.05
SF3A3-204ENST00000462258 ACKR3P25106 362 aa8.47□□□□□ -1.05
SF3A3-204ENST00000462258 EPHA2P29317 976 aa8.47□□□□□ -1.05
SF3A3-204ENST00000462258 NPY4RP50391 375 aa8.47□□□□□ -1.05
SF3A3-204ENST00000462258 HCCSP53701 268 aa8.47□□□□□ -1.05
SF3A3-204ENST00000462258 IL5RAQ01344 420 aa8.47□□□□□ -1.05
SF3A3-204ENST00000462258 PAX8Q06710 450 aa8.47□□□□□ -1.05
SF3A3-204ENST00000462258 PRDX4Q13162 271 aa8.47□□□□□ -1.05
SF3A3-204ENST00000462258 KDM4DQ6B0I6 523 aa8.47□□□□□ -1.05
SF3A3-204ENST00000462258 WDR82Q6UXN9 313 aa8.47□□□□□ -1.05
SF3A3-204ENST00000462258 ZNF841Q6ZN19 808 aa8.47□□□□□ -1.05
SF3A3-204ENST00000462258 AMIGO2Q86SJ2 522 aa8.47□□□□□ -1.05
SF3A3-204ENST00000462258 FAM90A1Q86YD7 464 aa8.47□□□□□ -1.05
SF3A3-204ENST00000462258 OR1M1Q8NGA1 313 aa8.47□□□□□ -1.05
SF3A3-204ENST00000462258 FAM81AQ8TBF8 368 aa8.47□□□□□ -1.05
SF3A3-204ENST00000462258 TMEM163Q8TC26 289 aa8.47□□□□□ -1.05
SF3A3-204ENST00000462258 LRRC29Q8WV35 223 aa8.47□□□□□ -1.05
SF3A3-204ENST00000462258 LRTOMTQ8WZ04 291 aa8.47□□□□□ -1.05
SF3A3-204ENST00000462258 UPRTQ96BW1 309 aa8.47□□□□□ -1.05
SF3A3-204ENST00000462258 ITPKCQ96DU7 683 aa8.47□□□□□ -1.05
SF3A3-204ENST00000462258 DUS3LQ96G46 650 aaKnown RBP8.47□□□□□ -1.05
SF3A3-204ENST00000462258 LYZL4Q96KX0 146 aa8.47□□□□□ -1.05
SF3A3-204ENST00000462258 OR8B4Q96RC9 309 aa8.47□□□□□ -1.05
SF3A3-204ENST00000462258 TEAD3Q99594 435 aa8.47□□□□□ -1.05
SF3A3-204ENST00000462258 CIB1Q99828 191 aa8.47□□□□□ -1.05
SF3A3-204ENST00000462258 MICU1Q9BPX6 476 aa8.47□□□□□ -1.05
SF3A3-204ENST00000462258 RTL8AQ9BWD3 113 aa8.47□□□□□ -1.05
SF3A3-204ENST00000462258 MROQ9BYG7 248 aa8.47□□□□□ -1.05
SF3A3-204ENST00000462258 PPP1R3EQ9H7J1 279 aa8.47□□□□□ -1.05
SF3A3-204ENST00000462258 SMURF1Q9HCE7 757 aa8.47□□□□□ -1.05
SF3A3-204ENST00000462258 ABCB9Q9NP78 766 aa8.47□□□□□ -1.05
SF3A3-204ENST00000462258 ESM1Q9NQ30 184 aa8.47□□□□□ -1.05
SF3A3-204ENST00000462258 FAM206AQ9NX38 181 aa8.47□□□□□ -1.05
SF3A3-204ENST00000462258 ERVK-18Q9QC07 812 aa8.47□□□□□ -1.05
SF3A3-204ENST00000462258 ZNF69Q9UC07 566 aa8.47□□□□□ -1.05
SF3A3-204ENST00000462258 COPS3Q9UNS2 423 aa8.47□□□□□ -1.05
SF3A3-204ENST00000462258 RHBDD3Q9Y3P4 386 aa8.47□□□□□ -1.05
SF3A3-204ENST00000462258 TMEM14AQ9Y6G1 99 aa8.47□□□□□ -1.05
SF3A3-204ENST00000462258 IGHV3OR15-7A0A075B7D8 119 aa8.46□□□□□ -1.06
SF3A3-204ENST00000462258 IGHV3OR16-10A0A075B7F0 116 aa8.46□□□□□ -1.06
SF3A3-204ENST00000462258 SLC22A31A6NKX4 558 aa8.46□□□□□ -1.06
SF3A3-204ENST00000462258 ZNF850A8MQ14 1090 aa8.46□□□□□ -1.06
SF3A3-204ENST00000462258 GYPAP02724 150 aa8.46□□□□□ -1.06
SF3A3-204ENST00000462258 IGHV4-38-2P0DP08 117 aa8.46□□□□□ -1.06
SF3A3-204ENST00000462258 RIDAP52758 137 aaKnown RBP8.46□□□□□ -1.06
SF3A3-204ENST00000462258 ZNF829Q3KNS6 432 aaPredicted RBP8.46□□□□□ -1.06
SF3A3-204ENST00000462258 NXNL2Q5VZ03 156 aa8.46□□□□□ -1.06
SF3A3-204ENST00000462258 TEX36Q5VZQ5 186 aa8.46□□□□□ -1.06
SF3A3-204ENST00000462258 C12orf73Q69YU5 71 aa8.46□□□□□ -1.06
SF3A3-204ENST00000462258 DEGS2Q6QHC5 323 aa8.46□□□□□ -1.06
SF3A3-204ENST00000462258 RBMS3Q6XE24 437 aaKnown RBP8.46□□□□□ -1.06
SF3A3-204ENST00000462258 DOK3Q7L591 496 aa8.46□□□□□ -1.06
SF3A3-204ENST00000462258 BCDIN3DQ7Z5W3 292 aaKnown RBP8.46□□□□□ -1.06
SF3A3-204ENST00000462258 COMMD2Q86X83 199 aa8.46□□□□□ -1.06
SF3A3-204ENST00000462258 GID4Q8IVV7 300 aa8.46□□□□□ -1.06
SF3A3-204ENST00000462258 ZDHHC23Q8IYP9 409 aa8.46□□□□□ -1.06
SF3A3-204ENST00000462258 SIGLECL1Q8N7X8 197 aa8.46□□□□□ -1.06
SF3A3-204ENST00000462258 TCEANCQ8N8B7 351 aa8.46□□□□□ -1.06
SF3A3-204ENST00000462258 ZDHHC22Q8N966 263 aa8.46□□□□□ -1.06
SF3A3-204ENST00000462258 FAM216AQ8WUB2 273 aa8.46□□□□□ -1.06
SF3A3-204ENST00000462258 HPSE2Q8WWQ2 592 aa8.46□□□□□ -1.06
SF3A3-204ENST00000462258 ASB17Q8WXJ9 295 aa8.46□□□□□ -1.06
SF3A3-204ENST00000462258 PKP2Q99959 881 aa8.46□□□□□ -1.06
SF3A3-204ENST00000462258 TLNRD1Q9H1K6 362 aa8.46□□□□□ -1.06
SF3A3-204ENST00000462258 SEMA6AQ9H2E6 1030 aa8.46□□□□□ -1.06
SF3A3-204ENST00000462258 RNPEPL1Q9HAU8 725 aa8.46□□□□□ -1.06
SF3A3-204ENST00000462258 IKZF2Q9UKS7 526 aa8.46□□□□□ -1.06
SF3A3-204ENST00000462258 OAZ3Q9UMX2 235 aa8.46□□□□□ -1.06
SF3A3-204ENST00000462258 MPC1Q9Y5U8 109 aa8.46□□□□□ -1.06
SF3A3-204ENST00000462258 TENM1Q9UKZ4 2725 aa8.46□□□□□ -1.06
SF3A3-204ENST00000462258 A0A0U1RQV5 110 aa8.45□□□□□ -1.06
SF3A3-204ENST00000462258 ZNF816-ZNF321PA0A0X1KG74 233 aa8.45□□□□□ -1.06
SF3A3-204ENST00000462258 KIR2DS1A0A191URI9 304 aa8.45□□□□□ -1.06
SF3A3-204ENST00000462258 TMEM269A0A1B0GVZ9 245 aa8.45□□□□□ -1.06
SF3A3-204ENST00000462258 DNAJC9-AS1A6NH13 148 aa8.45□□□□□ -1.06
SF3A3-204ENST00000462258 SAC3D1A6NKF1 404 aa8.45□□□□□ -1.06
SF3A3-204ENST00000462258 TMEM210A6NLX4 147 aa8.45□□□□□ -1.06
SF3A3-204ENST00000462258 SRRM5B3KS81 715 aa8.45□□□□□ -1.06
SF3A3-204ENST00000462258 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.45□□□□□ -1.06
SF3A3-204ENST00000462258 CDIPTO14735 213 aa8.45□□□□□ -1.06
SF3A3-204ENST00000462258 TMPRSS2O15393 492 aa8.45□□□□□ -1.06
SF3A3-204ENST00000462258 NDUFA2O43678 99 aa8.45□□□□□ -1.06
SF3A3-204ENST00000462258 ZNF254O75437 659 aa8.45□□□□□ -1.06
SF3A3-204ENST00000462258 PLATP00750 562 aa8.45□□□□□ -1.06
SF3A3-204ENST00000462258 CST4P01036 141 aa8.45□□□□□ -1.06
SF3A3-204ENST00000462258 LHBP01229 141 aa8.45□□□□□ -1.06
SF3A3-204ENST00000462258 DCTDP32321 178 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms