RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 KLHDC7BQ96G42 594 aa16.3■□□□□ 0.2
HPS3-204ENST00000462030 FAM71F1Q96KD3 344 aaPredicted RBP16.3■□□□□ 0.2
HPS3-204ENST00000462030 CLCC1Q96S66 551 aa16.3■□□□□ 0.2
HPS3-204ENST00000462030 OCSTAMPQ9BR26 566 aa16.3■□□□□ 0.2
HPS3-204ENST00000462030 RNF122Q9H9V4 155 aa16.3■□□□□ 0.2
HPS3-204ENST00000462030 LHFPL6Q9Y693 200 aa16.3■□□□□ 0.2
HPS3-204ENST00000462030 FER1L5A0AVI2 2057 aa16.3■□□□□ 0.2
HPS3-204ENST00000462030 HCKP08631 526 aa16.29■□□□□ 0.2
HPS3-204ENST00000462030 DRD1P21728 446 aa16.29■□□□□ 0.2
HPS3-204ENST00000462030 DHPSP49366 369 aaPredicted RBP16.29■□□□□ 0.2
HPS3-204ENST00000462030 SPEM2Q0P670 501 aa16.29■□□□□ 0.2
HPS3-204ENST00000462030 OR8B12Q8NGG6 310 aa16.29■□□□□ 0.2
HPS3-204ENST00000462030 TMEM234Q8WY98 164 aa16.29■□□□□ 0.2
HPS3-204ENST00000462030 C14orf79Q96F83 325 aa16.29■□□□□ 0.2
HPS3-204ENST00000462030 SULT4A1Q9BR01 284 aa16.29■□□□□ 0.2
HPS3-204ENST00000462030 GPR84Q9NQS5 396 aa16.29■□□□□ 0.2
HPS3-204ENST00000462030 EDARQ9UNE0 448 aa16.29■□□□□ 0.2
HPS3-204ENST00000462030 EYSQ5T1H1 3165 aa16.29■□□□□ 0.2
HPS3-204ENST00000462030 CBR1P16152 277 aa16.29■□□□□ 0.2
HPS3-204ENST00000462030 SULT1A2P50226 295 aa16.29■□□□□ 0.2
HPS3-204ENST00000462030 RBMS3Q6XE24 437 aaKnown RBP16.29■□□□□ 0.2
HPS3-204ENST00000462030 C7orf61Q8IZ16 206 aa16.29■□□□□ 0.2
HPS3-204ENST00000462030 PNLDC1Q8NA58 520 aaKnown RBP16.29■□□□□ 0.2
HPS3-204ENST00000462030 ZNF784Q8NCA9 323 aaPredicted RBP16.29■□□□□ 0.2
HPS3-204ENST00000462030 NANPQ8TBE9 248 aa16.29■□□□□ 0.2
HPS3-204ENST00000462030 AKR1E2Q96JD6 320 aa16.29■□□□□ 0.2
HPS3-204ENST00000462030 NECAB3Q96P71 396 aaPredicted RBP16.29■□□□□ 0.2
HPS3-204ENST00000462030 EHFQ9NZC4 300 aa16.29■□□□□ 0.2
HPS3-204ENST00000462030 SUSD2Q9UGT4 822 aa16.29■□□□□ 0.2
HPS3-204ENST00000462030 OR8U9P0C7N5 309 aa16.28■□□□□ 0.2
HPS3-204ENST00000462030 PET100P0DJ07 73 aa16.28■□□□□ 0.2
HPS3-204ENST00000462030 ZNF708P17019 499 aa16.28■□□□□ 0.2
HPS3-204ENST00000462030 ZNF17P17021 662 aa16.28■□□□□ 0.2
HPS3-204ENST00000462030 CDAP32320 146 aa16.28■□□□□ 0.2
HPS3-204ENST00000462030 OR3A2P47893 321 aa16.28■□□□□ 0.2
HPS3-204ENST00000462030 RAB5BP61020 215 aa16.28■□□□□ 0.2
HPS3-204ENST00000462030 CSNK2A1P68400 391 aaPredicted RBP16.28■□□□□ 0.2
HPS3-204ENST00000462030 TMEM268Q5VZI3 342 aa16.28■□□□□ 0.2
HPS3-204ENST00000462030 Q6ZRG5 221 aa16.28■□□□□ 0.2
HPS3-204ENST00000462030 SLC16A13Q7RTY0 426 aa16.28■□□□□ 0.2
HPS3-204ENST00000462030 CSNK2A3Q8NEV1 391 aa16.28■□□□□ 0.2
HPS3-204ENST00000462030 OR8U1Q8NH10 309 aa16.28■□□□□ 0.2
HPS3-204ENST00000462030 GPER1Q99527 375 aa16.28■□□□□ 0.2
HPS3-204ENST00000462030 POLR1DQ9Y2S0 133 aa16.28■□□□□ 0.2
HPS3-204ENST00000462030 IGHV3-20A0A0C4DH32 117 aa16.28■□□□□ 0.2
HPS3-204ENST00000462030 LILRA5A6NI73 299 aa16.28■□□□□ 0.2
HPS3-204ENST00000462030 KNG1P01042 644 aa16.28■□□□□ 0.2
HPS3-204ENST00000462030 FOLR2P14207 255 aa16.28■□□□□ 0.2
HPS3-204ENST00000462030 LAP3P28838 519 aa16.28■□□□□ 0.2
HPS3-204ENST00000462030 SNU13P55769 128 aaKnown RBP16.28■□□□□ 0.2
HPS3-204ENST00000462030 FBXW4P57775 412 aa16.28■□□□□ 0.2
HPS3-204ENST00000462030 ZNF121P58317 390 aaPredicted RBP16.28■□□□□ 0.2
HPS3-204ENST00000462030 FAM76BQ5HYJ3 339 aa16.28■□□□□ 0.2
HPS3-204ENST00000462030 C1orf189Q5VU69 101 aa16.28■□□□□ 0.2
HPS3-204ENST00000462030 SHISA6Q6ZSJ9 500 aa16.28■□□□□ 0.2
HPS3-204ENST00000462030 OR56B1Q8NGI3 324 aa16.28■□□□□ 0.2
HPS3-204ENST00000462030 OR5D18Q8NGL1 313 aa16.28■□□□□ 0.2
HPS3-204ENST00000462030 LMX1AQ8TE12 382 aa16.28■□□□□ 0.2
HPS3-204ENST00000462030 KIRREL1Q96J84 757 aa16.28■□□□□ 0.2
HPS3-204ENST00000462030 SCGB3A2Q96PL1 93 aa16.28■□□□□ 0.2
HPS3-204ENST00000462030 ZNF304Q9HCX3 659 aa16.28■□□□□ 0.2
HPS3-204ENST00000462030 SMCO4Q9NRQ5 59 aa16.28■□□□□ 0.2
HPS3-204ENST00000462030 PTGER4P35408 488 aa16.27■□□□□ 0.2
HPS3-204ENST00000462030 CCR5P51681 352 aa16.27■□□□□ 0.2
HPS3-204ENST00000462030 HYAL1Q12794 435 aa16.27■□□□□ 0.2
HPS3-204ENST00000462030 FOXF1Q12946 379 aa16.27■□□□□ 0.2
HPS3-204ENST00000462030 MFAP5Q13361 173 aa16.27■□□□□ 0.2
HPS3-204ENST00000462030 EIF5AL1Q6IS14 154 aaKnown RBP16.27■□□□□ 0.2
HPS3-204ENST00000462030 SECTM1Q8WVN6 248 aa16.27■□□□□ 0.2
HPS3-204ENST00000462030 TMEM106CQ9BVX2 250 aa16.27■□□□□ 0.2
HPS3-204ENST00000462030 VN1R1Q9GZP7 353 aa16.27■□□□□ 0.2
HPS3-204ENST00000462030 PARP12Q9H0J9 701 aaKnown RBP16.27■□□□□ 0.2
HPS3-204ENST00000462030 MTIF3Q9H2K0 278 aaKnown RBP16.27■□□□□ 0.2
HPS3-204ENST00000462030 SERINC1Q9NRX5 453 aa16.27■□□□□ 0.2
HPS3-204ENST00000462030 CACFD1Q9UGQ2 172 aa16.27■□□□□ 0.2
HPS3-204ENST00000462030 NPIPB13A6NJU9 1138 aa16.27■□□□□ 0.19
HPS3-204ENST00000462030 NPIPB4C9JG80 1138 aa16.27■□□□□ 0.19
HPS3-204ENST00000462030 ZNF878C9JN71 531 aa16.27■□□□□ 0.19
HPS3-204ENST00000462030 FBLP22087 321 aaKnown RBP16.27■□□□□ 0.19
HPS3-204ENST00000462030 CPT2P23786 658 aa16.27■□□□□ 0.19
HPS3-204ENST00000462030 EIF5AP63241 154 aaKnown RBP16.27■□□□□ 0.19
HPS3-204ENST00000462030 HSD11B2P80365 405 aa16.27■□□□□ 0.19
HPS3-204ENST00000462030 HGFACQ04756 655 aa16.27■□□□□ 0.19
HPS3-204ENST00000462030 ECH1Q13011 328 aa16.27■□□□□ 0.19
HPS3-204ENST00000462030 TMPRSS9Q7Z410 1059 aa16.27■□□□□ 0.19
HPS3-204ENST00000462030 GALNTL5Q7Z4T8 443 aa16.27■□□□□ 0.19
HPS3-204ENST00000462030 OR6S1Q8NH40 331 aa16.27■□□□□ 0.19
HPS3-204ENST00000462030 THAP3Q8WTV1 239 aaPredicted RBP16.27■□□□□ 0.19
HPS3-204ENST00000462030 MESP1Q9BRJ9 268 aa16.27■□□□□ 0.19
HPS3-204ENST00000462030 SMIM3Q9BZL3 60 aa16.27■□□□□ 0.19
HPS3-204ENST00000462030 KLHL13Q9P2N7 655 aa16.27■□□□□ 0.19
HPS3-204ENST00000462030 B3GAT1Q9P2W7 334 aa16.27■□□□□ 0.19
HPS3-204ENST00000462030 FBXL17Q9UF56 701 aa16.27■□□□□ 0.19
HPS3-204ENST00000462030 MMP17Q9ULZ9 603 aa16.27■□□□□ 0.19
HPS3-204ENST00000462030 LAMA1P25391 3075 aa16.27■□□□□ 0.19
HPS3-204ENST00000462030 IGKV1-9A0A0C4DH69 117 aa16.26■□□□□ 0.19
HPS3-204ENST00000462030 ANKUB1A6NFN9 424 aa16.26■□□□□ 0.19
HPS3-204ENST00000462030 TAAR5O14804 337 aa16.26■□□□□ 0.19
HPS3-204ENST00000462030 GIMD1P0DJR0 217 aa16.26■□□□□ 0.19
HPS3-204ENST00000462030 PTAFRP25105 342 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms