RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 SYNGR3O43761 229 aa3.59□□□□□ -1.83
ATP13A3-206ENST00000461660 SSNA1O43805 119 aa3.59□□□□□ -1.83
ATP13A3-206ENST00000461660 CNOT4O95628 575 aaKnown RBP3.59□□□□□ -1.83
ATP13A3-206ENST00000461660 CSF1P09603 554 aa3.59□□□□□ -1.83
ATP13A3-206ENST00000461660 CSF3P09919 207 aa3.59□□□□□ -1.83
ATP13A3-206ENST00000461660 HOXB1P14653 301 aaPredicted RBP3.59□□□□□ -1.83
ATP13A3-206ENST00000461660 SELEP16581 610 aa3.59□□□□□ -1.83
ATP13A3-206ENST00000461660 CTSSP25774 331 aa3.59□□□□□ -1.83
ATP13A3-206ENST00000461660 GSK3AP49840 483 aa3.59□□□□□ -1.83
ATP13A3-206ENST00000461660 SNU13P55769 128 aaKnown RBP3.59□□□□□ -1.83
ATP13A3-206ENST00000461660 PRSS12P56730 875 aa3.59□□□□□ -1.83
ATP13A3-206ENST00000461660 DGCR2P98153 550 aa3.59□□□□□ -1.83
ATP13A3-206ENST00000461660 CBX3Q13185 183 aa3.59□□□□□ -1.83
ATP13A3-206ENST00000461660 ASAH1Q13510 395 aa3.59□□□□□ -1.83
ATP13A3-206ENST00000461660 KISS1Q15726 138 aa3.59□□□□□ -1.83
ATP13A3-206ENST00000461660 BAK1Q16611 211 aa3.59□□□□□ -1.83
ATP13A3-206ENST00000461660 PCGF3Q3KNV8 242 aa3.59□□□□□ -1.83
ATP13A3-206ENST00000461660 DMRTC1Q5HYR2 192 aa3.59□□□□□ -1.83
ATP13A3-206ENST00000461660 SPATA46Q5T0L3 261 aa3.59□□□□□ -1.83
ATP13A3-206ENST00000461660 ATAD3CQ5T2N8 411 aa3.59□□□□□ -1.83
ATP13A3-206ENST00000461660 TMEM211Q6ICI0 200 aa3.59□□□□□ -1.83
ATP13A3-206ENST00000461660 RPUSD3Q6P087 351 aaKnown RBP3.59□□□□□ -1.83
ATP13A3-206ENST00000461660 TFAP2EQ6VUC0 442 aa3.59□□□□□ -1.83
ATP13A3-206ENST00000461660 NHLRC1Q6VVB1 395 aa3.59□□□□□ -1.83
ATP13A3-206ENST00000461660 Q6ZTK2 550 aa3.59□□□□□ -1.83
ATP13A3-206ENST00000461660 PRSS45Q7RTY3 260 aa3.59□□□□□ -1.83
ATP13A3-206ENST00000461660 AKAP14Q86UN6 197 aa3.59□□□□□ -1.83
ATP13A3-206ENST00000461660 NAA40Q86UY6 237 aa3.59□□□□□ -1.83
ATP13A3-206ENST00000461660 TMEM17Q86X19 198 aa3.59□□□□□ -1.83
ATP13A3-206ENST00000461660 WDFY1Q8IWB7 410 aa3.59□□□□□ -1.83
ATP13A3-206ENST00000461660 OR5AS1Q8N127 324 aa3.59□□□□□ -1.83
ATP13A3-206ENST00000461660 RBMXL3Q8N7X1 1067 aaKnown RBP3.59□□□□□ -1.83
ATP13A3-206ENST00000461660 OR1J1Q8NGS3 322 aa3.59□□□□□ -1.83
ATP13A3-206ENST00000461660 FAM57AQ8TBR7 257 aa3.59□□□□□ -1.83
ATP13A3-206ENST00000461660 CCDC120Q96HB5 630 aa3.59□□□□□ -1.83
ATP13A3-206ENST00000461660 RNF170Q96K19 258 aa3.59□□□□□ -1.83
ATP13A3-206ENST00000461660 CHST5Q9GZS9 411 aa3.59□□□□□ -1.83
ATP13A3-206ENST00000461660 OPN3Q9H1Y3 402 aaPredicted RBP3.59□□□□□ -1.83
ATP13A3-206ENST00000461660 BANF2Q9H503 90 aa3.59□□□□□ -1.83
ATP13A3-206ENST00000461660 GPN1Q9HCN4 374 aaPredicted RBP3.59□□□□□ -1.83
ATP13A3-206ENST00000461660 OBP2BQ9NPH6 170 aa3.59□□□□□ -1.83
ATP13A3-206ENST00000461660 RBFOX1Q9NWB1 397 aaKnown RBP3.59□□□□□ -1.83
ATP13A3-206ENST00000461660 COPZ2Q9P299 210 aa3.59□□□□□ -1.83
ATP13A3-206ENST00000461660 CLCF1Q9UBD9 225 aa3.59□□□□□ -1.83
ATP13A3-206ENST00000461660 SCP2D1Q9UJQ7 156 aa3.59□□□□□ -1.83
ATP13A3-206ENST00000461660 AMDHD2Q9Y303 409 aa3.59□□□□□ -1.83
ATP13A3-206ENST00000461660 A0A0G2JK05 382 aa3.59□□□□□ -1.84
ATP13A3-206ENST00000461660 MEIS3P1A6NDR6 274 aa3.59□□□□□ -1.84
ATP13A3-206ENST00000461660 DHRS7CA6NNS2 312 aa3.59□□□□□ -1.84
ATP13A3-206ENST00000461660 CD300LBA8K4G0 201 aa3.59□□□□□ -1.84
ATP13A3-206ENST00000461660 ZNF850A8MQ14 1090 aa3.59□□□□□ -1.84
ATP13A3-206ENST00000461660 ZNF736B4DX44 427 aaPredicted RBP3.59□□□□□ -1.84
ATP13A3-206ENST00000461660 DISC1C4P0D8 188 aa3.59□□□□□ -1.84
ATP13A3-206ENST00000461660 TRAPPC2LH3BP13 241 aa3.59□□□□□ -1.84
ATP13A3-206ENST00000461660 M0R1B8 84 aa3.59□□□□□ -1.84
ATP13A3-206ENST00000461660 XRCC3O43542 346 aa3.59□□□□□ -1.84
ATP13A3-206ENST00000461660 LMX1BO60663 402 aa3.59□□□□□ -1.84
ATP13A3-206ENST00000461660 RAB3DO95716 219 aa3.59□□□□□ -1.84
ATP13A3-206ENST00000461660 AMY2BP19961 511 aa3.59□□□□□ -1.84
ATP13A3-206ENST00000461660 GABRR1P24046 479 aa3.59□□□□□ -1.84
ATP13A3-206ENST00000461660 BLVRBP30043 206 aaPredicted RBP3.59□□□□□ -1.84
ATP13A3-206ENST00000461660 RAD52P43351 418 aa3.59□□□□□ -1.84
ATP13A3-206ENST00000461660 ZNF83P51522 516 aa3.59□□□□□ -1.84
ATP13A3-206ENST00000461660 BCAP31P51572 246 aa3.59□□□□□ -1.84
ATP13A3-206ENST00000461660 FUT6P51993 359 aa3.59□□□□□ -1.84
ATP13A3-206ENST00000461660 RPS23P62266 143 aaKnown RBP3.59□□□□□ -1.84
ATP13A3-206ENST00000461660 MZT1Q08AG7 82 aa3.59□□□□□ -1.84
ATP13A3-206ENST00000461660 KLRB1Q12918 225 aa3.59□□□□□ -1.84
ATP13A3-206ENST00000461660 OXA1LQ15070 435 aa3.59□□□□□ -1.84
ATP13A3-206ENST00000461660 SNAI3Q3KNW1 292 aa3.59□□□□□ -1.84
ATP13A3-206ENST00000461660 ZNF718Q3SXZ3 478 aa3.59□□□□□ -1.84
ATP13A3-206ENST00000461660 SCGB2B2Q4G0G5 96 aa3.59□□□□□ -1.84
ATP13A3-206ENST00000461660 VWA1Q6PCB0 445 aa3.59□□□□□ -1.84
ATP13A3-206ENST00000461660 C11orf88Q6PI97 169 aa3.59□□□□□ -1.84
ATP13A3-206ENST00000461660 VHLLQ6RSH7 139 aa3.59□□□□□ -1.84
ATP13A3-206ENST00000461660 Q6ZNX1 250 aa3.59□□□□□ -1.84
ATP13A3-206ENST00000461660 PEG10Q86TG7 708 aaKnown RBP3.59□□□□□ -1.84
ATP13A3-206ENST00000461660 ZNF610Q8N9Z0 462 aa3.59□□□□□ -1.84
ATP13A3-206ENST00000461660 UXS1Q8NBZ7 420 aa3.59□□□□□ -1.84
ATP13A3-206ENST00000461660 OR10K1Q8NGX5 313 aa3.59□□□□□ -1.84
ATP13A3-206ENST00000461660 OR14K1Q8NGZ2 314 aa3.59□□□□□ -1.84
ATP13A3-206ENST00000461660 OR52I2Q8NH67 350 aa3.59□□□□□ -1.84
ATP13A3-206ENST00000461660 RPS4Y2Q8TD47 263 aa3.59□□□□□ -1.84
ATP13A3-206ENST00000461660 SMIM4Q8WVI0 70 aa3.59□□□□□ -1.84
ATP13A3-206ENST00000461660 RND1Q92730 232 aa3.59□□□□□ -1.84
ATP13A3-206ENST00000461660 BCL2L2Q92843 193 aaPredicted RBP3.59□□□□□ -1.84
ATP13A3-206ENST00000461660 SGK3Q96BR1 496 aa3.59□□□□□ -1.84
ATP13A3-206ENST00000461660 NTNG2Q96CW9 530 aa3.59□□□□□ -1.84
ATP13A3-206ENST00000461660 RTL8AQ9BWD3 113 aa3.59□□□□□ -1.84
ATP13A3-206ENST00000461660 SFXN3Q9BWM7 321 aa3.59□□□□□ -1.84
ATP13A3-206ENST00000461660 C11orf54Q9H0W9 315 aaPredicted RBP3.59□□□□□ -1.84
ATP13A3-206ENST00000461660 ZNF442Q9H7R0 627 aa3.59□□□□□ -1.84
ATP13A3-206ENST00000461660 CNTD2Q9H8S5 307 aa3.59□□□□□ -1.84
ATP13A3-206ENST00000461660 ZMAT3Q9HA38 289 aaKnown RBP3.59□□□□□ -1.84
ATP13A3-206ENST00000461660 SCPEP1Q9HB40 452 aa3.59□□□□□ -1.84
ATP13A3-206ENST00000461660 ZNF701Q9NV72 531 aaPredicted RBP3.59□□□□□ -1.84
ATP13A3-206ENST00000461660 FAIMQ9NVQ4 179 aa3.59□□□□□ -1.84
ATP13A3-206ENST00000461660 PLEKHJ1Q9NW61 149 aa3.59□□□□□ -1.84
ATP13A3-206ENST00000461660 DUSP13Q9UII6 198 aa3.59□□□□□ -1.84
ATP13A3-206ENST00000461660 SPTBN4Q9H254 2564 aa3.59□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms