RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 ACSM5Q6NUN0 579 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 OLIG3Q7RTU3 272 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 TRMT61AQ96FX7 289 aaKnown RBP8.12□□□□□ -1.11
BRCA1-205ENST00000461221 TAAR9Q96RI9 348 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 PPT2Q9UMR5 302 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 FLVCR2Q9UPI3 526 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 AMMECR1Q9Y4X0 333 aaPredicted RBP8.12□□□□□ -1.11
BRCA1-205ENST00000461221 TRGV8A0A0C4DH27 118 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 MKRN2OSH3BPM6 223 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 MASP2O00187 686 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 CYR61O00622 381 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 TNFSF11O14788 317 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 CST4P01036 141 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 GCSHP23434 173 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 MDH2P40926 338 aaKnown RBP8.12□□□□□ -1.11
BRCA1-205ENST00000461221 PPOXP50336 477 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 DUSP2Q05923 314 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 TMEM241Q24JQ0 296 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 C11orf87Q6NUJ2 197 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 DLEU7Q6UYE1 221 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 KMT5CQ86Y97 462 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 CA13Q8N1Q1 262 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 NOXO1Q8NFA2 376 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 AKR7LQ8NHP1 331 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 RAB40CQ96S21 281 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 FAAP24Q9BTP7 215 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 ADAMTS5Q9UNA0 930 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 M0R1X1 148 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 SLC2A10O95528 541 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 VEGFBP49765 207 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 ZNF121P58317 390 aaPredicted RBP8.12□□□□□ -1.11
BRCA1-205ENST00000461221 PYCR3Q53H96 274 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 ACSM6Q6P461 480 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 OR2W3Q7Z3T1 314 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 ZDHHC22Q8N966 263 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 TMEM116Q8NCL8 245 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 OR2V1Q8NHB1 315 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 LILRB1Q8NHL6 650 aaPredicted RBP8.12□□□□□ -1.11
BRCA1-205ENST00000461221 BAHD1Q8TBE0 780 aaPredicted RBP8.12□□□□□ -1.11
BRCA1-205ENST00000461221 BCL2L10Q9HD36 194 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 THYN1Q9P016 225 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 ONECUT1Q9UBC0 465 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 MYH8P13535 1937 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 A0A1W2PN81 502 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 A0A1W2PR48 441 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 DNASE2O00115 360 aaPredicted RBP8.12□□□□□ -1.11
BRCA1-205ENST00000461221 CHRNA7P36544 502 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 OPRK1P41145 380 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 MMP15P51511 669 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 MAVSQ7Z434 540 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 DOLPP1Q86YN1 238 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 FUNDC1Q8IVP5 155 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 OR5D13Q8NGL4 314 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 TMEM208Q9BTX3 173 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 ZBP1Q9H171 429 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 SEBOXQ9HB31 216 aaPredicted RBP8.12□□□□□ -1.11
BRCA1-205ENST00000461221 FGF20Q9NP95 211 aaPredicted RBP8.12□□□□□ -1.11
BRCA1-205ENST00000461221 OR1A1Q9P1Q5 309 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 TMED3Q9Y3Q3 217 aa8.12□□□□□ -1.11
BRCA1-205ENST00000461221 FUT3P21217 361 aa8.11□□□□□ -1.11
BRCA1-205ENST00000461221 RHOBP62745 196 aa8.11□□□□□ -1.11
BRCA1-205ENST00000461221 AQP6Q13520 282 aa8.11□□□□□ -1.11
BRCA1-205ENST00000461221 ADPRHL1Q8NDY3 354 aa8.11□□□□□ -1.11
BRCA1-205ENST00000461221 EXTL1Q92935 676 aa8.11□□□□□ -1.11
BRCA1-205ENST00000461221 SPSB1Q96BD6 273 aa8.11□□□□□ -1.11
BRCA1-205ENST00000461221 ELSPBP1Q96BH3 223 aa8.11□□□□□ -1.11
BRCA1-205ENST00000461221 MISP3Q96FF7 219 aa8.11□□□□□ -1.11
BRCA1-205ENST00000461221 MS4A10Q96PG2 267 aa8.11□□□□□ -1.11
BRCA1-205ENST00000461221 SPACA5Q96QH8 159 aa8.11□□□□□ -1.11
BRCA1-205ENST00000461221 SLC17A5Q9NRA2 495 aa8.11□□□□□ -1.11
BRCA1-205ENST00000461221 FGF17O60258 216 aa8.11□□□□□ -1.11
BRCA1-205ENST00000461221 COX19Q49B96 90 aa8.11□□□□□ -1.11
BRCA1-205ENST00000461221 FAAP20Q6NZ36 180 aa8.11□□□□□ -1.11
BRCA1-205ENST00000461221 SLC26A10Q8NG04 563 aa8.11□□□□□ -1.11
BRCA1-205ENST00000461221 SMIM4Q8WVI0 70 aa8.11□□□□□ -1.11
BRCA1-205ENST00000461221 PRRX2Q99811 253 aa8.11□□□□□ -1.11
BRCA1-205ENST00000461221 HELTA6NFD8 242 aa8.11□□□□□ -1.11
BRCA1-205ENST00000461221 HOXC11O43248 304 aaPredicted RBP8.11□□□□□ -1.11
BRCA1-205ENST00000461221 CBR3O75828 277 aa8.11□□□□□ -1.11
BRCA1-205ENST00000461221 CRYABP02511 175 aaKnown RBP8.11□□□□□ -1.11
BRCA1-205ENST00000461221 SP1P08047 785 aa8.11□□□□□ -1.11
BRCA1-205ENST00000461221 SLC19A1P41440 591 aa8.11□□□□□ -1.11
BRCA1-205ENST00000461221 FABP5Q01469 135 aa8.11□□□□□ -1.11
BRCA1-205ENST00000461221 DPTQ07507 201 aa8.11□□□□□ -1.11
BRCA1-205ENST00000461221 FDX2Q6P4F2 183 aa8.11□□□□□ -1.11
BRCA1-205ENST00000461221 TMEM88Q6PEY1 159 aa8.11□□□□□ -1.11
BRCA1-205ENST00000461221 RPEQ96AT9 228 aa8.11□□□□□ -1.11
BRCA1-205ENST00000461221 WDR89Q96FK6 387 aaPredicted RBP8.11□□□□□ -1.11
BRCA1-205ENST00000461221 OR5V1Q9UGF6 321 aa8.11□□□□□ -1.11
BRCA1-205ENST00000461221 ZNF391Q9UJN7 358 aa8.11□□□□□ -1.11
BRCA1-205ENST00000461221 KCPQ6ZWJ8 1503 aa8.11□□□□□ -1.11
BRCA1-205ENST00000461221 MYH11P35749 1972 aa8.11□□□□□ -1.11
BRCA1-205ENST00000461221 KIAA1324LA8MWY0 1029 aaPredicted RBP8.11□□□□□ -1.11
BRCA1-205ENST00000461221 NPY1RP25929 384 aa8.11□□□□□ -1.11
BRCA1-205ENST00000461221 SLC6A1P30531 599 aa8.11□□□□□ -1.11
BRCA1-205ENST00000461221 CCR5P51681 352 aa8.11□□□□□ -1.11
BRCA1-205ENST00000461221 SLC38A11Q08AI6 406 aa8.11□□□□□ -1.11
BRCA1-205ENST00000461221 ZNF260Q3ZCT1 412 aa8.11□□□□□ -1.11
BRCA1-205ENST00000461221 CCSMST1Q4G0I0 132 aa8.11□□□□□ -1.11
BRCA1-205ENST00000461221 MIDNQ504T8 468 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms