RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 GINS1Q14691 196 aa14.18□□□□□ -0.14
TOP3A-202ENST00000461127 PTGES3Q15185 160 aaKnown RBP14.18□□□□□ -0.14
TOP3A-202ENST00000461127 PIP4P2Q8N4L2 257 aa14.18□□□□□ -0.14
TOP3A-202ENST00000461127 CELF2-AS1Q8N7Q2 184 aa14.18□□□□□ -0.14
TOP3A-202ENST00000461127 BHLHE23Q8NDY6 225 aa14.18□□□□□ -0.14
TOP3A-202ENST00000461127 IFT27Q9BW83 186 aa14.18□□□□□ -0.14
TOP3A-202ENST00000461127 PPA2Q9H2U2 334 aa14.18□□□□□ -0.14
TOP3A-202ENST00000461127 EMC7Q9NPA0 242 aa14.18□□□□□ -0.14
TOP3A-202ENST00000461127 TRIM36Q9NQ86 728 aa14.18□□□□□ -0.14
TOP3A-202ENST00000461127 IL20Q9NYY1 176 aa14.18□□□□□ -0.14
TOP3A-202ENST00000461127 HIF3AQ9Y2N7 669 aa14.18□□□□□ -0.14
TOP3A-202ENST00000461127 GMPPBQ9Y5P6 360 aa14.18□□□□□ -0.14
TOP3A-202ENST00000461127 IQCF6A8MYZ5 107 aa14.17□□□□□ -0.14
TOP3A-202ENST00000461127 NDUFA2O43678 99 aa14.17□□□□□ -0.14
TOP3A-202ENST00000461127 FAM20BO75063 409 aa14.17□□□□□ -0.14
TOP3A-202ENST00000461127 ECDO95905 644 aaPredicted RBP14.17□□□□□ -0.14
TOP3A-202ENST00000461127 EEF1B2P24534 225 aaKnown RBP14.17□□□□□ -0.14
TOP3A-202ENST00000461127 EPHA2P29317 976 aa14.17□□□□□ -0.14
TOP3A-202ENST00000461127 ADARB1P78563 741 aaKnown RBP14.17□□□□□ -0.14
TOP3A-202ENST00000461127 C11orf91Q3C1V1 193 aa14.17□□□□□ -0.14
TOP3A-202ENST00000461127 IQCF1Q8N6M8 205 aa14.17□□□□□ -0.14
TOP3A-202ENST00000461127 OR2T33Q8NG76 320 aa14.17□□□□□ -0.14
TOP3A-202ENST00000461127 OR8D4Q8NGM9 314 aa14.17□□□□□ -0.14
TOP3A-202ENST00000461127 CFHR4Q92496 578 aa14.17□□□□□ -0.14
TOP3A-202ENST00000461127 SLC7A6Q92536 515 aa14.17□□□□□ -0.14
TOP3A-202ENST00000461127 TFAP2CQ92754 450 aa14.17□□□□□ -0.14
TOP3A-202ENST00000461127 PHF21AQ96BD5 680 aa14.17□□□□□ -0.14
TOP3A-202ENST00000461127 PRRG3Q9BZD7 231 aa14.17□□□□□ -0.14
TOP3A-202ENST00000461127 CTSZQ9UBR2 303 aa14.17□□□□□ -0.14
TOP3A-202ENST00000461127 KPTNQ9Y664 436 aa14.17□□□□□ -0.14
TOP3A-202ENST00000461127 ZAR1LA6NP61 321 aa14.16□□□□□ -0.14
TOP3A-202ENST00000461127 LGALS8O00214 317 aa14.16□□□□□ -0.14
TOP3A-202ENST00000461127 SLC16A6O15403 523 aa14.16□□□□□ -0.14
TOP3A-202ENST00000461127 MPIG6BO95866 241 aa14.16□□□□□ -0.14
TOP3A-202ENST00000461127 PAHP00439 452 aa14.16□□□□□ -0.14
TOP3A-202ENST00000461127 FXYD6P3P58550 94 aa14.16□□□□□ -0.14
TOP3A-202ENST00000461127 CDC42P60953 191 aa14.16□□□□□ -0.14
TOP3A-202ENST00000461127 FHL1Q13642 323 aa14.16□□□□□ -0.14
TOP3A-202ENST00000461127 CDONQ4KMG0 1287 aa14.16□□□□□ -0.14
TOP3A-202ENST00000461127 SLX4IPQ5VYV7 408 aa14.16□□□□□ -0.14
TOP3A-202ENST00000461127 TMEM236Q5W0B7 351 aa14.16□□□□□ -0.14
TOP3A-202ENST00000461127 SFRP4Q6FHJ7 346 aaPredicted RBP14.16□□□□□ -0.14
TOP3A-202ENST00000461127 C11orf87Q6NUJ2 197 aa14.16□□□□□ -0.14
TOP3A-202ENST00000461127 DPY19L2P2Q6ZN68 376 aa14.16□□□□□ -0.14
TOP3A-202ENST00000461127 VMO1Q7Z5L0 202 aa14.16□□□□□ -0.14
TOP3A-202ENST00000461127 SETD9Q8NE22 299 aa14.16□□□□□ -0.14
TOP3A-202ENST00000461127 APOBEC3DQ96AK3 386 aaPredicted RBP14.16□□□□□ -0.14
TOP3A-202ENST00000461127 WWC2-AS2Q96NR7 200 aa14.16□□□□□ -0.14
TOP3A-202ENST00000461127 APOL4Q9BPW4 351 aa14.16□□□□□ -0.14
TOP3A-202ENST00000461127 HCAR1Q9BXC0 346 aa14.16□□□□□ -0.14
TOP3A-202ENST00000461127 SLC25A19Q9HC21 320 aa14.16□□□□□ -0.14
TOP3A-202ENST00000461127 UFSP2Q9NUQ7 469 aa14.16□□□□□ -0.14
TOP3A-202ENST00000461127 IMPAD1Q9NX62 359 aa14.16□□□□□ -0.14
TOP3A-202ENST00000461127 RNF7Q9UBF6 113 aa14.16□□□□□ -0.14
TOP3A-202ENST00000461127 FOXJ3Q9UPW0 622 aa14.16□□□□□ -0.14
TOP3A-202ENST00000461127 BAIAP2Q9UQB8 552 aa14.16□□□□□ -0.14
TOP3A-202ENST00000461127 COL7A1Q02388 2944 aa14.16□□□□□ -0.14
TOP3A-202ENST00000461127 TRAV38-1A0A0B4J264 116 aa14.15□□□□□ -0.14
TOP3A-202ENST00000461127 PPP1R3DO95685 299 aa14.15□□□□□ -0.14
TOP3A-202ENST00000461127 HLA-DPB1P04440 258 aa14.15□□□□□ -0.14
TOP3A-202ENST00000461127 HMGN1P05114 100 aa14.15□□□□□ -0.14
TOP3A-202ENST00000461127 SCG5P05408 212 aa14.15□□□□□ -0.14
TOP3A-202ENST00000461127 NOS3P29474 1203 aa14.15□□□□□ -0.14
TOP3A-202ENST00000461127 GGT2P36268 569 aa14.15□□□□□ -0.14
TOP3A-202ENST00000461127 RPS6KA3P51812 740 aa14.15□□□□□ -0.14
TOP3A-202ENST00000461127 EFNB2P52799 333 aa14.15□□□□□ -0.14
TOP3A-202ENST00000461127 CTXN1P60606 82 aa14.15□□□□□ -0.14
TOP3A-202ENST00000461127 GUCA2AQ02747 115 aa14.15□□□□□ -0.14
TOP3A-202ENST00000461127 EMX1Q04741 257 aaPredicted RBP14.15□□□□□ -0.14
TOP3A-202ENST00000461127 IL18R1Q13478 541 aa14.15□□□□□ -0.14
TOP3A-202ENST00000461127 AQP6Q13520 282 aa14.15□□□□□ -0.14
TOP3A-202ENST00000461127 OR8B8Q15620 311 aa14.15□□□□□ -0.14
TOP3A-202ENST00000461127 BTN2A1Q7KYR7 527 aa14.15□□□□□ -0.14
TOP3A-202ENST00000461127 KLHDC1Q8N7A1 406 aa14.15□□□□□ -0.14
TOP3A-202ENST00000461127 BOLLQ8N9W6 283 aaKnown RBP14.15□□□□□ -0.14
TOP3A-202ENST00000461127 OR4C13Q8NGP0 309 aa14.15□□□□□ -0.14
TOP3A-202ENST00000461127 OR1F12Q8NHA8 337 aa14.15□□□□□ -0.14
TOP3A-202ENST00000461127 OR2T6Q8NHC8 308 aa14.15□□□□□ -0.14
TOP3A-202ENST00000461127 FAM81AQ8TBF8 368 aa14.15□□□□□ -0.14
TOP3A-202ENST00000461127 HRASLS5Q96KN8 279 aa14.15□□□□□ -0.14
TOP3A-202ENST00000461127 ERMAPQ96PL5 475 aaPredicted RBP14.15□□□□□ -0.14
TOP3A-202ENST00000461127 PITX2Q99697 317 aa14.15□□□□□ -0.14
TOP3A-202ENST00000461127 CNTD2Q9H8S5 307 aa14.15□□□□□ -0.14
TOP3A-202ENST00000461127 FN3KRPQ9HA64 309 aa14.15□□□□□ -0.14
TOP3A-202ENST00000461127 SMURF1Q9HCE7 757 aa14.15□□□□□ -0.14
TOP3A-202ENST00000461127 ATPIF1Q9UII2 106 aa14.15□□□□□ -0.14
TOP3A-202ENST00000461127 A0A1B0GWJ7 208 aa14.14□□□□□ -0.15
TOP3A-202ENST00000461127 OR6C6A6NF89 314 aa14.14□□□□□ -0.15
TOP3A-202ENST00000461127 CD14P08571 375 aa14.14□□□□□ -0.15
TOP3A-202ENST00000461127 GRK5P34947 590 aa14.14□□□□□ -0.15
TOP3A-202ENST00000461127 CD200P41217 278 aa14.14□□□□□ -0.15
TOP3A-202ENST00000461127 KIR2DS4P43632 304 aa14.14□□□□□ -0.15
TOP3A-202ENST00000461127 CDK5Q00535 292 aa14.14□□□□□ -0.15
TOP3A-202ENST00000461127 MAB21L1Q13394 359 aa14.14□□□□□ -0.15
TOP3A-202ENST00000461127 NSUN5P1Q3KNT7 163 aa14.14□□□□□ -0.15
TOP3A-202ENST00000461127 C1orf122Q6ZSJ8 110 aa14.14□□□□□ -0.15
TOP3A-202ENST00000461127 CMTM4Q8IZR5 234 aa14.14□□□□□ -0.15
TOP3A-202ENST00000461127 C8orf59Q8N0T1 100 aaPredicted RBP14.14□□□□□ -0.15
TOP3A-202ENST00000461127 DTX3Q8N9I9 347 aa14.14□□□□□ -0.15
TOP3A-202ENST00000461127 OR4Q3Q8NH05 313 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms