RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 STX12Q86Y82 276 aa13.74□□□□□ -0.21
SSR4-206ENST00000460616 OR9A4Q8NGU2 314 aa13.74□□□□□ -0.21
SSR4-206ENST00000460616 SLC25A43Q8WUT9 341 aaPredicted RBP13.74□□□□□ -0.21
SSR4-206ENST00000460616 OR2M4Q96R27 311 aa13.74□□□□□ -0.21
SSR4-206ENST00000460616 S100A13Q99584 98 aa13.74□□□□□ -0.21
SSR4-206ENST00000460616 PPP4R1LQ9P1A2 415 aa13.74□□□□□ -0.21
SSR4-206ENST00000460616 TGFBR3LH3BV60 316 aa13.73□□□□□ -0.21
SSR4-206ENST00000460616 GMFGO60234 142 aa13.73□□□□□ -0.21
SSR4-206ENST00000460616 IGFALSP35858 605 aa13.73□□□□□ -0.21
SSR4-206ENST00000460616 RBP2P50120 134 aa13.73□□□□□ -0.21
SSR4-206ENST00000460616 RPS23P62266 143 aaKnown RBP13.73□□□□□ -0.21
SSR4-206ENST00000460616 RPS21P63220 83 aaKnown RBP13.73□□□□□ -0.21
SSR4-206ENST00000460616 CLINT1Q14677 625 aa13.73□□□□□ -0.21
SSR4-206ENST00000460616 IAH1Q2TAA2 248 aaPredicted RBP13.73□□□□□ -0.21
SSR4-206ENST00000460616 MED25Q71SY5 747 aa13.73□□□□□ -0.21
SSR4-206ENST00000460616 NUP54Q7Z3B4 507 aa13.73□□□□□ -0.21
SSR4-206ENST00000460616 PEG10Q86TG7 708 aaKnown RBP13.73□□□□□ -0.21
SSR4-206ENST00000460616 FAM160A2Q8N612 972 aaPredicted RBP13.73□□□□□ -0.21
SSR4-206ENST00000460616 UBAC2Q8NBM4 344 aa13.73□□□□□ -0.21
SSR4-206ENST00000460616 SLC25A36Q96CQ1 311 aa13.73□□□□□ -0.21
SSR4-206ENST00000460616 GNRHR2Q96P88 292 aa13.73□□□□□ -0.21
SSR4-206ENST00000460616 NUDT16L1Q9BRJ7 211 aaKnown RBP13.73□□□□□ -0.21
SSR4-206ENST00000460616 PRDM13Q9H4Q3 707 aa13.73□□□□□ -0.21
SSR4-206ENST00000460616 UBQLN4Q9NRR5 601 aa13.73□□□□□ -0.21
SSR4-206ENST00000460616 DOK5Q9P104 306 aa13.73□□□□□ -0.21
SSR4-206ENST00000460616 MMP17Q9ULZ9 603 aa13.73□□□□□ -0.21
SSR4-206ENST00000460616 PRSS38A1L453 326 aa13.73□□□□□ -0.21
SSR4-206ENST00000460616 CHRM2P08172 466 aa13.73□□□□□ -0.21
SSR4-206ENST00000460616 DANCRP0C864 163 aa13.73□□□□□ -0.21
SSR4-206ENST00000460616 OR13C7P0DN81 318 aa13.73□□□□□ -0.21
SSR4-206ENST00000460616 RPUSD3Q6P087 351 aaKnown RBP13.73□□□□□ -0.21
SSR4-206ENST00000460616 ZNF101Q8IZC7 436 aa13.73□□□□□ -0.21
SSR4-206ENST00000460616 PNLDC1Q8NA58 520 aaKnown RBP13.73□□□□□ -0.21
SSR4-206ENST00000460616 OR5H2Q8NGV7 314 aa13.73□□□□□ -0.21
SSR4-206ENST00000460616 MR1Q95460 341 aa13.73□□□□□ -0.21
SSR4-206ENST00000460616 S100PBPQ96BU1 408 aa13.73□□□□□ -0.21
SSR4-206ENST00000460616 YPEL4Q96NS1 127 aa13.73□□□□□ -0.21
SSR4-206ENST00000460616 KLHDC3Q9BQ90 382 aa13.73□□□□□ -0.21
SSR4-206ENST00000460616 OR10A5Q9H207 317 aa13.73□□□□□ -0.21
SSR4-206ENST00000460616 LUZP4Q9P127 313 aa13.73□□□□□ -0.21
SSR4-206ENST00000460616 HDGFL3Q9Y3E1 203 aa13.73□□□□□ -0.21
SSR4-206ENST00000460616 TTC28Q96AY4 2481 aa13.73□□□□□ -0.21
SSR4-206ENST00000460616 LOC101059948A0A1B0GTJ6 334 aa13.72□□□□□ -0.21
SSR4-206ENST00000460616 A0A1W2PQU0 124 aa13.72□□□□□ -0.21
SSR4-206ENST00000460616 TCRBV21S2A2A0A5A6 115 aa13.72□□□□□ -0.21
SSR4-206ENST00000460616 FIGNL2A6NMB9 653 aa13.72□□□□□ -0.21
SSR4-206ENST00000460616 HIST1H1BP16401 226 aaKnown RBP13.72□□□□□ -0.21
SSR4-206ENST00000460616 CAMLGP49069 296 aa13.72□□□□□ -0.21
SSR4-206ENST00000460616 C14orf28Q4W4Y0 310 aa13.72□□□□□ -0.21
SSR4-206ENST00000460616 FNDC7Q5VTL7 733 aa13.72□□□□□ -0.21
SSR4-206ENST00000460616 ZNF574Q6ZN55 896 aaPredicted RBP13.72□□□□□ -0.21
SSR4-206ENST00000460616 TTLL10Q6ZVT0 673 aa13.72□□□□□ -0.21
SSR4-206ENST00000460616 UBALD2Q8IYN6 164 aa13.72□□□□□ -0.21
SSR4-206ENST00000460616 OR10D4PQ8NGN7 298 aa13.72□□□□□ -0.21
SSR4-206ENST00000460616 CCL4L1Q8NHW4 92 aa13.72□□□□□ -0.21
SSR4-206ENST00000460616 COA3Q9Y2R0 106 aaPredicted RBP13.72□□□□□ -0.21
SSR4-206ENST00000460616 FBXO7Q9Y3I1 522 aa13.72□□□□□ -0.21
SSR4-206ENST00000460616 PUS1Q9Y606 427 aaKnown RBP eCLIP13.72□□□□□ -0.21
SSR4-206ENST00000460616 FANCMQ8IYD8 2048 aa13.72□□□□□ -0.21
SSR4-206ENST00000460616 ARGFXA6NJG6 315 aa13.72□□□□□ -0.21
SSR4-206ENST00000460616 SCDO00767 359 aa13.72□□□□□ -0.21
SSR4-206ENST00000460616 BGLAPP02818 100 aa13.72□□□□□ -0.21
SSR4-206ENST00000460616 CXCR1P25024 350 aa13.72□□□□□ -0.21
SSR4-206ENST00000460616 GPR3P46089 330 aa13.72□□□□□ -0.21
SSR4-206ENST00000460616 FHITP49789 147 aa13.72□□□□□ -0.21
SSR4-206ENST00000460616 GLO1Q04760 184 aa13.72□□□□□ -0.21
SSR4-206ENST00000460616 OR13G1Q8NGZ3 307 aa13.72□□□□□ -0.21
SSR4-206ENST00000460616 ZNF519Q8TB69 540 aa13.72□□□□□ -0.21
SSR4-206ENST00000460616 BAHD1Q8TBE0 780 aaPredicted RBP13.72□□□□□ -0.21
SSR4-206ENST00000460616 ST7LQ8TDW4 575 aa13.72□□□□□ -0.21
SSR4-206ENST00000460616 MEGF10Q96KG7 1140 aa13.72□□□□□ -0.21
SSR4-206ENST00000460616 PRRX2Q99811 253 aa13.72□□□□□ -0.21
SSR4-206ENST00000460616 PBDC1Q9BVG4 233 aa13.72□□□□□ -0.21
SSR4-206ENST00000460616 CUTCQ9NTM9 273 aa13.72□□□□□ -0.21
SSR4-206ENST00000460616 VSX1Q9NZR4 365 aaPredicted RBP13.72□□□□□ -0.21
SSR4-206ENST00000460616 SLC5A6Q9Y289 635 aa13.72□□□□□ -0.21
SSR4-206ENST00000460616 DNAH14Q0VDD8 3507 aa13.71□□□□□ -0.21
SSR4-206ENST00000460616 TMEM14DPA8MWL7 114 aa13.71□□□□□ -0.21
SSR4-206ENST00000460616 DEDDO75618 318 aa13.71□□□□□ -0.21
SSR4-206ENST00000460616 GSTP1P09211 210 aaKnown RBP13.71□□□□□ -0.21
SSR4-206ENST00000460616 RPS2P15880 293 aaKnown RBP13.71□□□□□ -0.21
SSR4-206ENST00000460616 ACTR1BP42025 376 aa13.71□□□□□ -0.21
SSR4-206ENST00000460616 OR3A2P47893 321 aa13.71□□□□□ -0.21
SSR4-206ENST00000460616 ZXDAP98168 799 aa13.71□□□□□ -0.21
SSR4-206ENST00000460616 PLAC9Q5JTB6 97 aa13.71□□□□□ -0.21
SSR4-206ENST00000460616 AADACL3Q5VUY0 350 aa13.71□□□□□ -0.21
SSR4-206ENST00000460616 ZNF776Q68DI1 518 aaPredicted RBP13.71□□□□□ -0.21
SSR4-206ENST00000460616 ZNF529Q6P280 563 aa13.71□□□□□ -0.21
SSR4-206ENST00000460616 DCXRQ7Z4W1 244 aa13.71□□□□□ -0.21
SSR4-206ENST00000460616 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.71□□□□□ -0.21
SSR4-206ENST00000460616 CPNE4Q96A23 557 aaPredicted RBP13.71□□□□□ -0.21
SSR4-206ENST00000460616 SCARF2Q96GP6 870 aaPredicted RBP13.71□□□□□ -0.21
SSR4-206ENST00000460616 MRGPRX1Q96LB2 322 aa13.71□□□□□ -0.21
SSR4-206ENST00000460616 DGAT2Q96PD7 388 aa13.71□□□□□ -0.21
SSR4-206ENST00000460616 CCDC3Q9BQI4 270 aa13.71□□□□□ -0.21
SSR4-206ENST00000460616 IER2Q9BTL4 223 aa13.71□□□□□ -0.21
SSR4-206ENST00000460616 LPAR5Q9H1C0 372 aa13.71□□□□□ -0.21
SSR4-206ENST00000460616 SDHAF3Q9NRP4 125 aa13.71□□□□□ -0.21
SSR4-206ENST00000460616 ANAPC10Q9UM13 185 aa13.71□□□□□ -0.21
SSR4-206ENST00000460616 SDCBPO00560 298 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms