RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 EDDM3AQ14507 147 aa13.21□□□□□ -0.29
PTPRU-205ENST00000460170 RHBDD2Q6NTF9 364 aa13.21□□□□□ -0.29
PTPRU-205ENST00000460170 CENPVL1A0A0U1RR11 272 aa13.21□□□□□ -0.3
PTPRU-205ENST00000460170 A0A1W2PQD3 144 aa13.21□□□□□ -0.3
PTPRU-205ENST00000460170 ARGFXA6NJG6 315 aa13.21□□□□□ -0.3
PTPRU-205ENST00000460170 GSTZ1O43708 216 aaPredicted RBP13.21□□□□□ -0.3
PTPRU-205ENST00000460170 CT45A8P0DMV1 189 aa13.21□□□□□ -0.3
PTPRU-205ENST00000460170 CT45A9P0DMV2 189 aa13.21□□□□□ -0.3
PTPRU-205ENST00000460170 RAB5CP51148 216 aa13.21□□□□□ -0.3
PTPRU-205ENST00000460170 FUT6P51993 359 aa13.21□□□□□ -0.3
PTPRU-205ENST00000460170 PPIAP62937 165 aaKnown RBP13.21□□□□□ -0.3
PTPRU-205ENST00000460170 HTD2P86397 168 aa13.21□□□□□ -0.3
PTPRU-205ENST00000460170 OR8G1Q15617 311 aa13.21□□□□□ -0.3
PTPRU-205ENST00000460170 CT45A2Q5DJT8 189 aa13.21□□□□□ -0.3
PTPRU-205ENST00000460170 Q6ZRG5 221 aa13.21□□□□□ -0.3
PTPRU-205ENST00000460170 ZDHHC23Q8IYP9 409 aa13.21□□□□□ -0.3
PTPRU-205ENST00000460170 OR1F12Q8NHA8 337 aa13.21□□□□□ -0.3
PTPRU-205ENST00000460170 PURGQ9UJV8 347 aaKnown RBP13.21□□□□□ -0.3
PTPRU-205ENST00000460170 MYO16Q9Y6X6 1858 aa13.21□□□□□ -0.3
PTPRU-205ENST00000460170 MPZL1O95297 269 aa13.2□□□□□ -0.3
PTPRU-205ENST00000460170 HAAOP46952 286 aa13.2□□□□□ -0.3
PTPRU-205ENST00000460170 SLC37A1P57057 533 aa13.2□□□□□ -0.3
PTPRU-205ENST00000460170 DHRS2Q13268 280 aa13.2□□□□□ -0.3
PTPRU-205ENST00000460170 CMBLQ96DG6 245 aa13.2□□□□□ -0.3
PTPRU-205ENST00000460170 NME2P1O60361 137 aa13.2□□□□□ -0.3
PTPRU-205ENST00000460170 OR13C7P0DN81 318 aa13.2□□□□□ -0.3
PTPRU-205ENST00000460170 KISS1Q15726 138 aa13.2□□□□□ -0.3
PTPRU-205ENST00000460170 ETFDHQ16134 617 aa13.2□□□□□ -0.3
PTPRU-205ENST00000460170 TMEM182Q6ZP80 229 aaPredicted RBP13.2□□□□□ -0.3
PTPRU-205ENST00000460170 CDC20BQ86Y33 519 aa13.2□□□□□ -0.3
PTPRU-205ENST00000460170 HEYLQ9NQ87 328 aaPredicted RBP13.2□□□□□ -0.3
PTPRU-205ENST00000460170 SERTAD4Q9NUC0 356 aa13.2□□□□□ -0.3
PTPRU-205ENST00000460170 FRRS1LQ9P0K9 344 aa13.2□□□□□ -0.3
PTPRU-205ENST00000460170 LSM2Q9Y333 95 aaKnown RBP13.2□□□□□ -0.3
PTPRU-205ENST00000460170 SELEP16581 610 aa13.2□□□□□ -0.3
PTPRU-205ENST00000460170 PDZK1IP1Q13113 114 aa13.2□□□□□ -0.3
PTPRU-205ENST00000460170 PRSS53Q2L4Q9 553 aa13.2□□□□□ -0.3
PTPRU-205ENST00000460170 KCNIP4Q6PIL6 250 aa13.2□□□□□ -0.3
PTPRU-205ENST00000460170 LSRQ86X29 649 aaPredicted RBP13.2□□□□□ -0.3
PTPRU-205ENST00000460170 OR10Z1Q8NGY1 313 aa13.2□□□□□ -0.3
PTPRU-205ENST00000460170 ZPBPQ9BS86 351 aa13.2□□□□□ -0.3
PTPRU-205ENST00000460170 PLK3Q9H4B4 646 aa13.2□□□□□ -0.3
PTPRU-205ENST00000460170 SPRY1O43609 319 aaPredicted RBP13.2□□□□□ -0.3
PTPRU-205ENST00000460170 WDR1O75083 606 aa13.2□□□□□ -0.3
PTPRU-205ENST00000460170 CD96P40200 585 aa13.2□□□□□ -0.3
PTPRU-205ENST00000460170 DRAM2Q6UX65 266 aa13.2□□□□□ -0.3
PTPRU-205ENST00000460170 MCHR2Q969V1 340 aa13.2□□□□□ -0.3
PTPRU-205ENST00000460170 HIPK2Q9H2X6 1198 aa13.2□□□□□ -0.3
PTPRU-205ENST00000460170 MBTPS2O43462 519 aa13.2□□□□□ -0.3
PTPRU-205ENST00000460170 HIST1H1DP16402 221 aaKnown RBP13.2□□□□□ -0.3
PTPRU-205ENST00000460170 HOXA1P49639 335 aaPredicted RBP13.2□□□□□ -0.3
PTPRU-205ENST00000460170 P2RX3P56373 397 aa13.2□□□□□ -0.3
PTPRU-205ENST00000460170 TRA2AQ13595 282 aaKnown RBP eCLIP13.2□□□□□ -0.3
PTPRU-205ENST00000460170 ZNF626Q68DY1 528 aa13.2□□□□□ -0.3
PTPRU-205ENST00000460170 OR8G2PQ6IF36 304 aa13.2□□□□□ -0.3
PTPRU-205ENST00000460170 C1QTNF6Q9BXI9 259 aa13.2□□□□□ -0.3
PTPRU-205ENST00000460170 LHX9Q9NQ69 397 aa13.2□□□□□ -0.3
PTPRU-205ENST00000460170 RGPD3A6NKT7 1758 aaPredicted RBP13.19□□□□□ -0.3
PTPRU-205ENST00000460170 ZNF732B4DXR9 585 aa13.19□□□□□ -0.3
PTPRU-205ENST00000460170 ATP6V1G2-DDX39BF2Z307 99 aa13.19□□□□□ -0.3
PTPRU-205ENST00000460170 SCO1O75880 301 aa13.19□□□□□ -0.3
PTPRU-205ENST00000460170 NUBPLQ8TB37 319 aa13.19□□□□□ -0.3
PTPRU-205ENST00000460170 GNPNAT1Q96EK6 184 aaPredicted RBP13.19□□□□□ -0.3
PTPRU-205ENST00000460170 TRMT61AQ96FX7 289 aaKnown RBP13.19□□□□□ -0.3
PTPRU-205ENST00000460170 FAM234AQ9H0X4 552 aa13.19□□□□□ -0.3
PTPRU-205ENST00000460170 NGBQ9NPG2 151 aa13.19□□□□□ -0.3
PTPRU-205ENST00000460170 TAGLN2P37802 199 aaKnown RBP13.19□□□□□ -0.3
PTPRU-205ENST00000460170 LIMS1P48059 325 aa13.19□□□□□ -0.3
PTPRU-205ENST00000460170 SKP2Q13309 424 aa13.19□□□□□ -0.3
PTPRU-205ENST00000460170 ARHGAP5-AS1Q96IT6 56 aa13.19□□□□□ -0.3
PTPRU-205ENST00000460170 C10orf90Q96M02 699 aa13.19□□□□□ -0.3
PTPRU-205ENST00000460170 TMEM231Q9H6L2 316 aa13.19□□□□□ -0.3
PTPRU-205ENST00000460170 SH2D1BO14796 132 aa13.19□□□□□ -0.3
PTPRU-205ENST00000460170 RAB35Q15286 201 aa13.19□□□□□ -0.3
PTPRU-205ENST00000460170 WIPI1Q5MNZ9 446 aaPredicted RBP13.19□□□□□ -0.3
PTPRU-205ENST00000460170 FBXL14Q8N1E6 418 aa13.19□□□□□ -0.3
PTPRU-205ENST00000460170 OR52N4Q8NGI2 321 aa13.19□□□□□ -0.3
PTPRU-205ENST00000460170 FBXW5Q969U6 566 aa13.19□□□□□ -0.3
PTPRU-205ENST00000460170 RIMS4Q9H426 269 aaPredicted RBP13.19□□□□□ -0.3
PTPRU-205ENST00000460170 CKAP5Q14008 2032 aa13.19□□□□□ -0.3
PTPRU-205ENST00000460170 LTBP1Q14766 1721 aa13.19□□□□□ -0.3
PTPRU-205ENST00000460170 OR4C45A6NMZ5 311 aa13.19□□□□□ -0.3
PTPRU-205ENST00000460170 FPR2P25090 351 aa13.19□□□□□ -0.3
PTPRU-205ENST00000460170 EPHA8P29322 1005 aaPredicted RBP13.19□□□□□ -0.3
PTPRU-205ENST00000460170 RAB11AP62491 216 aa13.19□□□□□ -0.3
PTPRU-205ENST00000460170 TESK1Q15569 626 aa13.19□□□□□ -0.3
PTPRU-205ENST00000460170 C14orf79Q96F83 325 aa13.19□□□□□ -0.3
PTPRU-205ENST00000460170 ZFP92A6NM28 416 aa13.18□□□□□ -0.3
PTPRU-205ENST00000460170 PTP4A3O75365 173 aa13.18□□□□□ -0.3
PTPRU-205ENST00000460170 ACAA2P42765 397 aaKnown RBP13.18□□□□□ -0.3
PTPRU-205ENST00000460170 RBPJQ06330 500 aa13.18□□□□□ -0.3
PTPRU-205ENST00000460170 ZADH2Q8N4Q0 377 aa13.18□□□□□ -0.3
PTPRU-205ENST00000460170 DHRS3O75911 302 aa13.18□□□□□ -0.3
PTPRU-205ENST00000460170 AQP8O94778 261 aa13.18□□□□□ -0.3
PTPRU-205ENST00000460170 PTGFRP43088 359 aa13.18□□□□□ -0.3
PTPRU-205ENST00000460170 MPPED2Q15777 294 aa13.18□□□□□ -0.3
PTPRU-205ENST00000460170 OR2AE1Q8NHA4 323 aa13.18□□□□□ -0.3
PTPRU-205ENST00000460170 PTPMT1Q8WUK0 201 aaPredicted RBP13.18□□□□□ -0.3
PTPRU-205ENST00000460170 PRSS27Q9BQR3 290 aa13.18□□□□□ -0.3
PTPRU-205ENST00000460170 SARGQ9BW04 601 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms