RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 SULT1A3P0DMM9 295 aa17.7■□□□□ 0.42
SNX27-204ENST00000458013 SULT1A4P0DMN0 295 aa17.7■□□□□ 0.42
SNX27-204ENST00000458013 TAS2R45P59539 299 aa17.7■□□□□ 0.42
SNX27-204ENST00000458013 AQP6Q13520 282 aa17.7■□□□□ 0.42
SNX27-204ENST00000458013 CDK5R1Q15078 307 aa17.7■□□□□ 0.42
SNX27-204ENST00000458013 EXD3Q8N9H8 876 aa17.7■□□□□ 0.42
SNX27-204ENST00000458013 ADPRHL1Q8NDY3 354 aa17.7■□□□□ 0.42
SNX27-204ENST00000458013 E5RGE8 158 aa17.7■□□□□ 0.42
SNX27-204ENST00000458013 J3KRW8 73 aa17.7■□□□□ 0.42
SNX27-204ENST00000458013 ZNF83P51522 516 aa17.7■□□□□ 0.42
SNX27-204ENST00000458013 DYNC2LI1Q8TCX1 351 aa17.7■□□□□ 0.42
SNX27-204ENST00000458013 GAL3ST2Q9H3Q3 398 aa17.7■□□□□ 0.42
SNX27-204ENST00000458013 ZDHHC11Q9H8X9 412 aa17.7■□□□□ 0.42
SNX27-204ENST00000458013 SAGE1Q9NXZ1 904 aa17.7■□□□□ 0.42
SNX27-204ENST00000458013 NSG2Q9Y328 171 aa17.7■□□□□ 0.42
SNX27-204ENST00000458013 TARM1B6A8C7 271 aa17.7■□□□□ 0.42
SNX27-204ENST00000458013 GLB1P16278 677 aa17.7■□□□□ 0.42
SNX27-204ENST00000458013 NDFIP1Q9BT67 221 aa17.7■□□□□ 0.42
SNX27-204ENST00000458013 BPIFB3P59826 476 aa17.7■□□□□ 0.42
SNX27-204ENST00000458013 C16orf47Q6ZP98 133 aaPredicted RBP17.7■□□□□ 0.42
SNX27-204ENST00000458013 BTLAQ7Z6A9 289 aa17.7■□□□□ 0.42
SNX27-204ENST00000458013 CPEB3Q8NE35 698 aaKnown RBP17.7■□□□□ 0.42
SNX27-204ENST00000458013 ADGRG7Q96K78 797 aa17.7■□□□□ 0.42
SNX27-204ENST00000458013 B3GALNT1O75752 331 aa17.7■□□□□ 0.42
SNX27-204ENST00000458013 FGF8P55075 233 aaPredicted RBP17.7■□□□□ 0.42
SNX27-204ENST00000458013 RNASEKQ6P5S7 137 aaKnown RBP17.7■□□□□ 0.42
SNX27-204ENST00000458013 HOXC11O43248 304 aaPredicted RBP17.69■□□□□ 0.42
SNX27-204ENST00000458013 CRYAAP02489 173 aa17.69■□□□□ 0.42
SNX27-204ENST00000458013 CLN3Q13286 438 aa17.69■□□□□ 0.42
SNX27-204ENST00000458013 RGS7BPQ6MZT1 257 aaPredicted RBP17.69■□□□□ 0.42
SNX27-204ENST00000458013 C2orf50Q96LR7 162 aa17.69■□□□□ 0.42
SNX27-204ENST00000458013 C10orf90Q96M02 699 aa17.69■□□□□ 0.42
SNX27-204ENST00000458013 C12orf57Q99622 126 aa17.69■□□□□ 0.42
SNX27-204ENST00000458013 TXNIPQ9H3M7 391 aa17.69■□□□□ 0.42
SNX27-204ENST00000458013 EMC4Q5J8M3 183 aa17.69■□□□□ 0.42
SNX27-204ENST00000458013 MORN4Q8NDC4 146 aa17.69■□□□□ 0.42
SNX27-204ENST00000458013 OR2M7Q8NG81 312 aa17.69■□□□□ 0.42
SNX27-204ENST00000458013 GPX8Q8TED1 209 aa17.69■□□□□ 0.42
SNX27-204ENST00000458013 ALX3O95076 343 aa17.69■□□□□ 0.42
SNX27-204ENST00000458013 KRASP01116 189 aa17.69■□□□□ 0.42
SNX27-204ENST00000458013 CEACAM6P40199 344 aa17.69■□□□□ 0.42
SNX27-204ENST00000458013 YBX1P67809 324 aaKnown RBP17.69■□□□□ 0.42
SNX27-204ENST00000458013 COL19A1Q14993 1142 aa17.69■□□□□ 0.42
SNX27-204ENST00000458013 TMEM240Q5SV17 173 aa17.69■□□□□ 0.42
SNX27-204ENST00000458013 PARD6AQ9NPB6 346 aa17.69■□□□□ 0.42
SNX27-204ENST00000458013 METTL12A8MUP2 240 aa17.69■□□□□ 0.42
SNX27-204ENST00000458013 CEACAM16Q2WEN9 425 aa17.69■□□□□ 0.42
SNX27-204ENST00000458013 CROCCQ5TZA2 2017 aa17.68■□□□□ 0.42
SNX27-204ENST00000458013 TRAV34A0A0B4J273 112 aa17.68■□□□□ 0.42
SNX27-204ENST00000458013 TAAR5O14804 337 aa17.68■□□□□ 0.42
SNX27-204ENST00000458013 TIGITQ495A1 244 aa17.68■□□□□ 0.42
SNX27-204ENST00000458013 NPEPL1Q8NDH3 523 aa17.68■□□□□ 0.42
SNX27-204ENST00000458013 TMPRSS5Q9H3S3 457 aa17.68■□□□□ 0.42
SNX27-204ENST00000458013 KLF13Q9Y2Y9 288 aaPredicted RBP17.68■□□□□ 0.42
SNX27-204ENST00000458013 CAPZBP47756 277 aa17.68■□□□□ 0.42
SNX27-204ENST00000458013 GFRALQ6UXV0 394 aa17.68■□□□□ 0.42
SNX27-204ENST00000458013 MRGPREQ86SM8 312 aa17.68■□□□□ 0.42
SNX27-204ENST00000458013 GALMQ96C23 342 aa17.68■□□□□ 0.42
SNX27-204ENST00000458013 ADAT1Q9BUB4 502 aaKnown RBP17.68■□□□□ 0.42
SNX27-204ENST00000458013 FAM90A27PA6NNH2 459 aa17.68■□□□□ 0.42
SNX27-204ENST00000458013 PPICP45877 212 aa17.68■□□□□ 0.42
SNX27-204ENST00000458013 EVX1P49640 407 aa17.68■□□□□ 0.42
SNX27-204ENST00000458013 RPS23P62266 143 aaKnown RBP17.68■□□□□ 0.42
SNX27-204ENST00000458013 B9D1Q9UPM9 204 aa17.68■□□□□ 0.42
SNX27-204ENST00000458013 TMEM272A0A1B0GTI8 110 aa17.68■□□□□ 0.42
SNX27-204ENST00000458013 KCNE4Q8WWG9 221 aa17.68■□□□□ 0.42
SNX27-204ENST00000458013 CLDN23Q96B33 292 aa17.68■□□□□ 0.42
SNX27-204ENST00000458013 SMOC1Q9H4F8 434 aa17.68■□□□□ 0.42
SNX27-204ENST00000458013 UBE2ZQ9H832 354 aaPredicted RBP17.68■□□□□ 0.42
SNX27-204ENST00000458013 DLL4Q9NR61 685 aa17.68■□□□□ 0.42
SNX27-204ENST00000458013 TRAPPC1Q9Y5R8 145 aa17.68■□□□□ 0.42
SNX27-204ENST00000458013 SERTM1A2A2V5 107 aa17.68■□□□□ 0.42
SNX27-204ENST00000458013 PRSS44E7EML9 344 aa17.68■□□□□ 0.42
SNX27-204ENST00000458013 SCGB1C2P0DMR2 95 aa17.68■□□□□ 0.42
SNX27-204ENST00000458013 CDK5Q00535 292 aa17.68■□□□□ 0.42
SNX27-204ENST00000458013 CTXN2P0C2S0 81 aa17.67■□□□□ 0.42
SNX27-204ENST00000458013 ATF1P18846 271 aa17.67■□□□□ 0.42
SNX27-204ENST00000458013 AMER3Q8N944 861 aa17.67■□□□□ 0.42
SNX27-204ENST00000458013 NRTNQ99748 197 aa17.67■□□□□ 0.42
SNX27-204ENST00000458013 NUDT9Q9BW91 350 aa17.67■□□□□ 0.42
SNX27-204ENST00000458013 FRG2CA6NGY1 282 aa17.67■□□□□ 0.42
SNX27-204ENST00000458013 SMIM17P0DL12 118 aa17.67■□□□□ 0.42
SNX27-204ENST00000458013 ANKRD36CQ5JPF3 1778 aa17.67■□□□□ 0.42
SNX27-204ENST00000458013 RTN4IP1Q8WWV3 396 aaPredicted RBP17.67■□□□□ 0.42
SNX27-204ENST00000458013 OR2A14Q96R47 310 aa17.67■□□□□ 0.42
SNX27-204ENST00000458013 CDCA4Q9BXL8 241 aa17.67■□□□□ 0.42
SNX27-204ENST00000458013 GSX2Q9BZM3 304 aa17.67■□□□□ 0.42
SNX27-204ENST00000458013 ADAM20O43506 726 aa17.67■□□□□ 0.42
SNX27-204ENST00000458013 CA6P23280 308 aa17.67■□□□□ 0.42
SNX27-204ENST00000458013 CNRIP1Q96F85 164 aaPredicted RBP17.67■□□□□ 0.42
SNX27-204ENST00000458013 GNRHR2Q96P88 292 aa17.67■□□□□ 0.42
SNX27-204ENST00000458013 MOB1AQ9H8S9 216 aa17.67■□□□□ 0.42
SNX27-204ENST00000458013 P4HTMQ9NXG6 502 aa17.67■□□□□ 0.42
SNX27-204ENST00000458013 PHOX2AO14813 284 aa17.67■□□□□ 0.42
SNX27-204ENST00000458013 ETFRF1Q6IPR1 90 aa17.67■□□□□ 0.42
SNX27-204ENST00000458013 FAM219AQ8IW50 185 aa17.67■□□□□ 0.42
SNX27-204ENST00000458013 PLPP6Q8IY26 295 aa17.67■□□□□ 0.42
SNX27-204ENST00000458013 PHYHIPQ92561 330 aa17.67■□□□□ 0.42
SNX27-204ENST00000458013 GNPNAT1Q96EK6 184 aaPredicted RBP17.67■□□□□ 0.42
SNX27-204ENST00000458013 PRO1933Q9H354 126 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms