RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 ISG15P05161 165 aa11.96□□□□□ -0.49
SMPD4-215ENST00000457039 CDK1P06493 297 aa11.96□□□□□ -0.49
SMPD4-215ENST00000457039 CRHBPP24387 322 aa11.96□□□□□ -0.49
SMPD4-215ENST00000457039 MAP2K3P46734 347 aa11.96□□□□□ -0.49
SMPD4-215ENST00000457039 TGM4P49221 684 aa11.96□□□□□ -0.49
SMPD4-215ENST00000457039 ALKBH1Q13686 389 aaKnown RBP11.96□□□□□ -0.49
SMPD4-215ENST00000457039 OR8G1Q15617 311 aa11.96□□□□□ -0.49
SMPD4-215ENST00000457039 ZBTB37Q5TC79 503 aa11.96□□□□□ -0.49
SMPD4-215ENST00000457039 XAF1Q6GPH4 301 aa11.96□□□□□ -0.49
SMPD4-215ENST00000457039 TMPRSS11AQ6ZMR5 421 aa11.96□□□□□ -0.49
SMPD4-215ENST00000457039 DOK3Q7L591 496 aa11.96□□□□□ -0.49
SMPD4-215ENST00000457039 KLBQ86Z14 1044 aa11.96□□□□□ -0.49
SMPD4-215ENST00000457039 STX19Q8N4C7 294 aa11.96□□□□□ -0.49
SMPD4-215ENST00000457039 KLHL36Q8N4N3 616 aa11.96□□□□□ -0.49
SMPD4-215ENST00000457039 CELF2-AS1Q8N7Q2 184 aa11.96□□□□□ -0.49
SMPD4-215ENST00000457039 SEMA6DQ8NFY4 1073 aa11.96□□□□□ -0.49
SMPD4-215ENST00000457039 HAVCR2Q8TDQ0 301 aa11.96□□□□□ -0.49
SMPD4-215ENST00000457039 SGCDQ92629 289 aa11.96□□□□□ -0.49
SMPD4-215ENST00000457039 DVL3Q92997 716 aaPredicted RBP11.96□□□□□ -0.49
SMPD4-215ENST00000457039 PPP1R3EQ9H7J1 279 aa11.96□□□□□ -0.49
SMPD4-215ENST00000457039 CHODLQ9H9P2 273 aa11.96□□□□□ -0.49
SMPD4-215ENST00000457039 DLL4Q9NR61 685 aa11.96□□□□□ -0.49
SMPD4-215ENST00000457039 SCN3BQ9NY72 215 aa11.96□□□□□ -0.49
SMPD4-215ENST00000457039 CACNG2Q9Y698 323 aa11.96□□□□□ -0.49
SMPD4-215ENST00000457039 HIVEP1P15822 2718 aa11.95□□□□□ -0.5
SMPD4-215ENST00000457039 ZNF816-ZNF321PA0A0X1KG74 233 aa11.95□□□□□ -0.5
SMPD4-215ENST00000457039 PTGES3LE9PB15 166 aa11.95□□□□□ -0.5
SMPD4-215ENST00000457039 TPD52L2O43399 206 aaKnown RBP11.95□□□□□ -0.5
SMPD4-215ENST00000457039 CDC14BO60729 498 aa11.95□□□□□ -0.5
SMPD4-215ENST00000457039 MTRF1O75570 445 aaKnown RBP11.95□□□□□ -0.5
SMPD4-215ENST00000457039 LALBAP00709 142 aa11.95□□□□□ -0.5
SMPD4-215ENST00000457039 UBCP0CG48 685 aaKnown RBP11.95□□□□□ -0.5
SMPD4-215ENST00000457039 TNFRSF1AP19438 455 aa11.95□□□□□ -0.5
SMPD4-215ENST00000457039 GATA4P43694 442 aa11.95□□□□□ -0.5
SMPD4-215ENST00000457039 SRP9P49458 86 aaKnown RBP11.95□□□□□ -0.5
SMPD4-215ENST00000457039 GTF2A1P52655 376 aaPredicted RBP11.95□□□□□ -0.5
SMPD4-215ENST00000457039 GBX2P52951 348 aaPredicted RBP11.95□□□□□ -0.5
SMPD4-215ENST00000457039 RIPPLY1Q0D2K3 151 aa11.95□□□□□ -0.5
SMPD4-215ENST00000457039 MED21Q13503 144 aa11.95□□□□□ -0.5
SMPD4-215ENST00000457039 DOC2BQ14184 412 aa11.95□□□□□ -0.5
SMPD4-215ENST00000457039 ODF4Q2M2E3 257 aa11.95□□□□□ -0.5
SMPD4-215ENST00000457039 TMEM42Q69YG0 159 aa11.95□□□□□ -0.5
SMPD4-215ENST00000457039 COMMD2Q86X83 199 aa11.95□□□□□ -0.5
SMPD4-215ENST00000457039 RDH10Q8IZV5 341 aa11.95□□□□□ -0.5
SMPD4-215ENST00000457039 FTMTQ8N4E7 242 aa11.95□□□□□ -0.5
SMPD4-215ENST00000457039 CCDC54Q8NEL0 328 aa11.95□□□□□ -0.5
SMPD4-215ENST00000457039 RPS4Y2Q8TD47 263 aa11.95□□□□□ -0.5
SMPD4-215ENST00000457039 ITPKCQ96DU7 683 aa11.95□□□□□ -0.5
SMPD4-215ENST00000457039 TMUB1Q9BVT8 246 aa11.95□□□□□ -0.5
SMPD4-215ENST00000457039 PAPOLGQ9BWT3 736 aaKnown RBP11.95□□□□□ -0.5
SMPD4-215ENST00000457039 CDCA4Q9BXL8 241 aa11.95□□□□□ -0.5
SMPD4-215ENST00000457039 GCM1Q9NP62 436 aa11.95□□□□□ -0.5
SMPD4-215ENST00000457039 ZNF275Q9NSD4 429 aaPredicted RBP11.95□□□□□ -0.5
SMPD4-215ENST00000457039 CHCHD3Q9NX63 227 aaKnown RBP11.95□□□□□ -0.5
SMPD4-215ENST00000457039 BABAM2Q9NXR7 383 aa11.95□□□□□ -0.5
SMPD4-215ENST00000457039 TPRKBQ9Y3C4 175 aa11.95□□□□□ -0.5
SMPD4-215ENST00000457039 MPC1Q9Y5U8 109 aa11.95□□□□□ -0.5
SMPD4-215ENST00000457039 TANC2Q9HCD6 1990 aa11.94□□□□□ -0.5
SMPD4-215ENST00000457039 LOC100289279A0A1B0GTE1 492 aa11.94□□□□□ -0.5
SMPD4-215ENST00000457039 A0A1B0GVI7 797 aa11.94□□□□□ -0.5
SMPD4-215ENST00000457039 LOC107986453A0A1B0GWG9 222 aa11.94□□□□□ -0.5
SMPD4-215ENST00000457039 SYT7O43581 403 aa11.94□□□□□ -0.5
SMPD4-215ENST00000457039 SLC25A16P16260 332 aa11.94□□□□□ -0.5
SMPD4-215ENST00000457039 FAHP16930 419 aa11.94□□□□□ -0.5
SMPD4-215ENST00000457039 NR4A2P43354 598 aa11.94□□□□□ -0.5
SMPD4-215ENST00000457039 TMEM33P57088 247 aa11.94□□□□□ -0.5
SMPD4-215ENST00000457039 HNRNPA0Q13151 305 aaKnown RBP11.94□□□□□ -0.5
SMPD4-215ENST00000457039 PRDX4Q13162 271 aa11.94□□□□□ -0.5
SMPD4-215ENST00000457039 IRF3Q14653 427 aa11.94□□□□□ -0.5
SMPD4-215ENST00000457039 CARTPTQ16568 116 aa11.94□□□□□ -0.5
SMPD4-215ENST00000457039 CCDC58Q4VC31 144 aa11.94□□□□□ -0.5
SMPD4-215ENST00000457039 RBM48Q5RL73 367 aaKnown RBP11.94□□□□□ -0.5
SMPD4-215ENST00000457039 TMEM244Q5VVB8 128 aa11.94□□□□□ -0.5
SMPD4-215ENST00000457039 RPL22L1Q6P5R6 122 aaKnown RBP11.94□□□□□ -0.5
SMPD4-215ENST00000457039 CIARTQ8N365 385 aaPredicted RBP11.94□□□□□ -0.5
SMPD4-215ENST00000457039 NANOGP1Q8N7R0 232 aa11.94□□□□□ -0.5
SMPD4-215ENST00000457039 SPERTQ8NA61 448 aa11.94□□□□□ -0.5
SMPD4-215ENST00000457039 HPSE2Q8WWQ2 592 aa11.94□□□□□ -0.5
SMPD4-215ENST00000457039 GATAD2BQ8WXI9 593 aa11.94□□□□□ -0.5
SMPD4-215ENST00000457039 MYDGFQ969H8 173 aa11.94□□□□□ -0.5
SMPD4-215ENST00000457039 PIMREGQ9BSJ6 248 aa11.94□□□□□ -0.5
SMPD4-215ENST00000457039 BPESC1Q9GZL8 116 aa11.94□□□□□ -0.5
SMPD4-215ENST00000457039 FGF23Q9GZV9 251 aaPredicted RBP11.94□□□□□ -0.5
SMPD4-215ENST00000457039 Q9H521 79 aa11.94□□□□□ -0.5
SMPD4-215ENST00000457039 ABCB9Q9NP78 766 aa11.94□□□□□ -0.5
SMPD4-215ENST00000457039 ERVK-18Q9QC07 812 aa11.94□□□□□ -0.5
SMPD4-215ENST00000457039 ENPP5Q9UJA9 477 aa11.94□□□□□ -0.5
SMPD4-215ENST00000457039 PIGLQ9Y2B2 252 aa11.94□□□□□ -0.5
SMPD4-215ENST00000457039 SIRT4Q9Y6E7 314 aaPredicted RBP11.94□□□□□ -0.5
SMPD4-215ENST00000457039 FLNAP21333 2647 aaKnown RBP11.94□□□□□ -0.5
SMPD4-215ENST00000457039 ZNF850A8MQ14 1090 aa11.93□□□□□ -0.5
SMPD4-215ENST00000457039 RNF223E7ERA6 249 aa11.93□□□□□ -0.5
SMPD4-215ENST00000457039 H7C1Q1 480 aa11.93□□□□□ -0.5
SMPD4-215ENST00000457039 OGG1O15527 345 aa11.93□□□□□ -0.5
SMPD4-215ENST00000457039 LMX1BO60663 402 aa11.93□□□□□ -0.5
SMPD4-215ENST00000457039 ZFPL1O95159 310 aa11.93□□□□□ -0.5
SMPD4-215ENST00000457039 RBMXP38159 391 aaKnown RBP11.93□□□□□ -0.5
SMPD4-215ENST00000457039 GNALP38405 381 aa11.93□□□□□ -0.5
SMPD4-215ENST00000457039 PMELP40967 661 aa11.93□□□□□ -0.5
SMPD4-215ENST00000457039 CDK5R1Q15078 307 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms