RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 PTGFRP43088 359 aa13.22□□□□□ -0.29
LDLR-202ENST00000455727 CBX5P45973 191 aa13.22□□□□□ -0.29
LDLR-202ENST00000455727 FAM209AQ5JX71 171 aa13.22□□□□□ -0.29
LDLR-202ENST00000455727 ACER2Q5QJU3 275 aa13.22□□□□□ -0.29
LDLR-202ENST00000455727 CRIP3Q6Q6R5 217 aa13.22□□□□□ -0.29
LDLR-202ENST00000455727 TIPARPQ7Z3E1 657 aaKnown RBP13.22□□□□□ -0.29
LDLR-202ENST00000455727 YRDCQ86U90 279 aaKnown RBP13.22□□□□□ -0.29
LDLR-202ENST00000455727 GPR137CQ8N3F9 429 aa13.22□□□□□ -0.29
LDLR-202ENST00000455727 OR52H1Q8NGJ2 320 aa13.22□□□□□ -0.29
LDLR-202ENST00000455727 FBXO17Q96EF6 278 aa13.22□□□□□ -0.29
LDLR-202ENST00000455727 ZNF799Q96GE5 643 aa13.22□□□□□ -0.29
LDLR-202ENST00000455727 TAAR9Q96RI9 348 aa13.22□□□□□ -0.29
LDLR-202ENST00000455727 FXYD6Q9H0Q3 95 aa13.22□□□□□ -0.29
LDLR-202ENST00000455727 PLEK2Q9NYT0 353 aa13.22□□□□□ -0.29
LDLR-202ENST00000455727 A0A0G2JMM0 328 aa13.22□□□□□ -0.29
LDLR-202ENST00000455727 A0A1W2PPB8 328 aa13.22□□□□□ -0.29
LDLR-202ENST00000455727 A0A1W2PRS3 328 aa13.22□□□□□ -0.29
LDLR-202ENST00000455727 DHRS7CA6NNS2 312 aa13.22□□□□□ -0.29
LDLR-202ENST00000455727 KIR3DP1A8MWS1 328 aa13.22□□□□□ -0.29
LDLR-202ENST00000455727 MFNGO00587 321 aa13.22□□□□□ -0.29
LDLR-202ENST00000455727 RP2O75695 350 aa13.22□□□□□ -0.29
LDLR-202ENST00000455727 CRTAPO75718 401 aaPredicted RBP13.22□□□□□ -0.29
LDLR-202ENST00000455727 B3GALNT1O75752 331 aa13.22□□□□□ -0.29
LDLR-202ENST00000455727 CRYZL1O95825 349 aa13.22□□□□□ -0.29
LDLR-202ENST00000455727 RRASP10301 218 aa13.22□□□□□ -0.29
LDLR-202ENST00000455727 RPS27AP62979 156 aaKnown RBP13.22□□□□□ -0.29
LDLR-202ENST00000455727 VAX1Q5SQQ9 334 aa13.22□□□□□ -0.29
LDLR-202ENST00000455727 LIN54Q6MZP7 749 aa13.22□□□□□ -0.29
LDLR-202ENST00000455727 TMEM65Q6PI78 240 aa13.22□□□□□ -0.29
LDLR-202ENST00000455727 SLC16A14Q7RTX9 510 aa13.22□□□□□ -0.29
LDLR-202ENST00000455727 OR4K15Q8NH41 348 aa13.22□□□□□ -0.29
LDLR-202ENST00000455727 MITD1Q8WV92 249 aa13.22□□□□□ -0.29
LDLR-202ENST00000455727 DDA1Q9BW61 102 aa13.22□□□□□ -0.29
LDLR-202ENST00000455727 SPRY4Q9C004 299 aa13.22□□□□□ -0.29
LDLR-202ENST00000455727 OR10A2Q9H208 303 aa13.22□□□□□ -0.29
LDLR-202ENST00000455727 SMOC1Q9H4F8 434 aa13.22□□□□□ -0.29
LDLR-202ENST00000455727 BANF2Q9H503 90 aa13.22□□□□□ -0.29
LDLR-202ENST00000455727 PCDHGA1Q9Y5H4 931 aa13.22□□□□□ -0.29
LDLR-202ENST00000455727 LRRC3CA6NJW4 275 aa13.21□□□□□ -0.29
LDLR-202ENST00000455727 ZNF716A6NP11 495 aa13.21□□□□□ -0.29
LDLR-202ENST00000455727 CST2P09228 141 aa13.21□□□□□ -0.29
LDLR-202ENST00000455727 AGTR1P30556 359 aa13.21□□□□□ -0.29
LDLR-202ENST00000455727 AP2S1P53680 142 aaPredicted RBP13.21□□□□□ -0.29
LDLR-202ENST00000455727 SORDQ00796 357 aa13.21□□□□□ -0.29
LDLR-202ENST00000455727 UBE2V2Q15819 145 aa13.21□□□□□ -0.29
LDLR-202ENST00000455727 DRAM2Q6UX65 266 aa13.21□□□□□ -0.29
LDLR-202ENST00000455727 HOGA1Q86XE5 327 aa13.21□□□□□ -0.29
LDLR-202ENST00000455727 ARRDC1Q8N5I2 433 aa13.21□□□□□ -0.29
LDLR-202ENST00000455727 CPT1CQ8TCG5 803 aa13.21□□□□□ -0.29
LDLR-202ENST00000455727 LIN37Q96GY3 246 aaPredicted RBP13.21□□□□□ -0.29
LDLR-202ENST00000455727 ADGRG7Q96K78 797 aa13.21□□□□□ -0.29
LDLR-202ENST00000455727 NOP16Q9Y3C1 178 aaKnown RBP13.21□□□□□ -0.29
LDLR-202ENST00000455727 MYO7BQ6PIF6 2116 aa13.21□□□□□ -0.3
LDLR-202ENST00000455727 TRAV14DV4A0A0A6YYC5 116 aa13.21□□□□□ -0.3
LDLR-202ENST00000455727 C9orf170A2RU37 121 aa13.21□□□□□ -0.3
LDLR-202ENST00000455727 OR2AT4A6NND4 320 aa13.21□□□□□ -0.3
LDLR-202ENST00000455727 CEACAM18A8MTB9 384 aa13.21□□□□□ -0.3
LDLR-202ENST00000455727 FOXI3A8MTJ6 420 aaPredicted RBP13.21□□□□□ -0.3
LDLR-202ENST00000455727 CRYGSP22914 178 aa13.21□□□□□ -0.3
LDLR-202ENST00000455727 CYB561P49447 251 aa13.21□□□□□ -0.3
LDLR-202ENST00000455727 RAB35Q15286 201 aa13.21□□□□□ -0.3
LDLR-202ENST00000455727 C17orf107Q6ZR85 190 aa13.21□□□□□ -0.3
LDLR-202ENST00000455727 RAB11FIP2Q7L804 512 aa13.21□□□□□ -0.3
LDLR-202ENST00000455727 CCDC28AQ8IWP9 274 aa13.21□□□□□ -0.3
LDLR-202ENST00000455727 ESX1Q8N693 406 aa13.21□□□□□ -0.3
LDLR-202ENST00000455727 HAS2Q92819 552 aa13.21□□□□□ -0.3
LDLR-202ENST00000455727 ZNF837Q96EG3 531 aaPredicted RBP13.21□□□□□ -0.3
LDLR-202ENST00000455727 ARL6Q9H0F7 186 aa13.21□□□□□ -0.3
LDLR-202ENST00000455727 P4HTMQ9NXG6 502 aa13.21□□□□□ -0.3
LDLR-202ENST00000455727 ZDBF2Q9HCK1 2354 aa13.2□□□□□ -0.3
LDLR-202ENST00000455727 A0A1W2PP11 408 aa13.2□□□□□ -0.3
LDLR-202ENST00000455727 EFSO43281 561 aa13.2□□□□□ -0.3
LDLR-202ENST00000455727 RFPL3SP0C7P2 107 aa13.2□□□□□ -0.3
LDLR-202ENST00000455727 PPP1R1AQ13522 171 aa13.2□□□□□ -0.3
LDLR-202ENST00000455727 RFPL4BQ6ZWI9 263 aa13.2□□□□□ -0.3
LDLR-202ENST00000455727 COMMD7Q86VX2 200 aa13.2□□□□□ -0.3
LDLR-202ENST00000455727 OR6K3Q8NGY3 331 aa13.2□□□□□ -0.3
LDLR-202ENST00000455727 TERB2Q8NHR7 220 aa13.2□□□□□ -0.3
LDLR-202ENST00000455727 FBXW5Q969U6 566 aa13.2□□□□□ -0.3
LDLR-202ENST00000455727 ARHGAP5-AS1Q96IT6 56 aa13.2□□□□□ -0.3
LDLR-202ENST00000455727 PHB2Q99623 299 aa13.2□□□□□ -0.3
LDLR-202ENST00000455727 MFFQ9GZY8 342 aa13.2□□□□□ -0.3
LDLR-202ENST00000455727 TMEM38BQ9NVV0 291 aa13.2□□□□□ -0.3
LDLR-202ENST00000455727 PIGLQ9Y2B2 252 aa13.2□□□□□ -0.3
LDLR-202ENST00000455727 DOCK10Q96BY6 2186 aa13.2□□□□□ -0.3
LDLR-202ENST00000455727 COL6A3P12111 3177 aa13.2□□□□□ -0.3
LDLR-202ENST00000455727 OR5H14A6NHG9 310 aa13.19□□□□□ -0.3
LDLR-202ENST00000455727 SHOXO15266 292 aa13.19□□□□□ -0.3
LDLR-202ENST00000455727 SGCEO43556 437 aa13.19□□□□□ -0.3
LDLR-202ENST00000455727 SYNGR3O43761 229 aa13.19□□□□□ -0.3
LDLR-202ENST00000455727 PMP2P02689 132 aa13.19□□□□□ -0.3
LDLR-202ENST00000455727 FAHP16930 419 aa13.19□□□□□ -0.3
LDLR-202ENST00000455727 MPLP40238 635 aa13.19□□□□□ -0.3
LDLR-202ENST00000455727 TAS2R31P59538 309 aa13.19□□□□□ -0.3
LDLR-202ENST00000455727 IL13RA1P78552 427 aa13.19□□□□□ -0.3
LDLR-202ENST00000455727 ARL6IP1Q15041 203 aa13.19□□□□□ -0.3
LDLR-202ENST00000455727 LPAL2Q16609 132 aa13.19□□□□□ -0.3
LDLR-202ENST00000455727 MICBQ29980 383 aa13.19□□□□□ -0.3
LDLR-202ENST00000455727 TOR2AQ5JU69 321 aa13.19□□□□□ -0.3
LDLR-202ENST00000455727 RIPPLY2Q5TAB7 128 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms