RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 TESK1Q15569 626 aa12.17□□□□□ -0.46
HMGXB4-204ENST00000455359 ZNF773Q6PK81 442 aa12.17□□□□□ -0.46
HMGXB4-204ENST00000455359 Q6ZR03 302 aa12.17□□□□□ -0.46
HMGXB4-204ENST00000455359 BHLHE23Q8NDY6 225 aa12.17□□□□□ -0.46
HMGXB4-204ENST00000455359 FCGR1BQ92637 280 aa12.17□□□□□ -0.46
HMGXB4-204ENST00000455359 ELMOD3Q96FG2 381 aa12.17□□□□□ -0.46
HMGXB4-204ENST00000455359 FAM71F1Q96KD3 344 aaPredicted RBP12.17□□□□□ -0.46
HMGXB4-204ENST00000455359 SORCS2Q96PQ0 1159 aa12.17□□□□□ -0.46
HMGXB4-204ENST00000455359 DECR2Q9NUI1 292 aa12.17□□□□□ -0.46
HMGXB4-204ENST00000455359 IL19Q9UHD0 177 aa12.17□□□□□ -0.46
HMGXB4-204ENST00000455359 ZNF281Q9Y2X9 895 aa12.17□□□□□ -0.46
HMGXB4-204ENST00000455359 ANXA2P2A6NMY6 339 aa12.16□□□□□ -0.46
HMGXB4-204ENST00000455359 TNFRSF1AP19438 455 aa12.16□□□□□ -0.46
HMGXB4-204ENST00000455359 CD200P41217 278 aa12.16□□□□□ -0.46
HMGXB4-204ENST00000455359 GTF2A1P52655 376 aaPredicted RBP12.16□□□□□ -0.46
HMGXB4-204ENST00000455359 CDH15P55291 814 aa12.16□□□□□ -0.46
HMGXB4-204ENST00000455359 DSCR9P59020 149 aa12.16□□□□□ -0.46
HMGXB4-204ENST00000455359 TNFAIP6P98066 277 aaPredicted RBP12.16□□□□□ -0.46
HMGXB4-204ENST00000455359 OR8G1Q15617 311 aa12.16□□□□□ -0.46
HMGXB4-204ENST00000455359 SHEQ5VZ18 495 aa12.16□□□□□ -0.46
HMGXB4-204ENST00000455359 TMEM42Q69YG0 159 aa12.16□□□□□ -0.46
HMGXB4-204ENST00000455359 ZNF367Q7RTV3 350 aa12.16□□□□□ -0.46
HMGXB4-204ENST00000455359 MS4A15Q8N5U1 240 aa12.16□□□□□ -0.46
HMGXB4-204ENST00000455359 OR2Z1Q8NG97 314 aa12.16□□□□□ -0.46
HMGXB4-204ENST00000455359 GPR148Q8TDV2 347 aa12.16□□□□□ -0.46
HMGXB4-204ENST00000455359 PP6455Q8WZ26 134 aa12.16□□□□□ -0.46
HMGXB4-204ENST00000455359 THRSPQ92748 146 aa12.16□□□□□ -0.46
HMGXB4-204ENST00000455359 ERGIC1Q969X5 290 aa12.16□□□□□ -0.46
HMGXB4-204ENST00000455359 TECTBQ96PL2 329 aa12.16□□□□□ -0.46
HMGXB4-204ENST00000455359 NR1H4Q96RI1 486 aaPredicted RBP12.16□□□□□ -0.46
HMGXB4-204ENST00000455359 PAPOLGQ9BWT3 736 aaKnown RBP12.16□□□□□ -0.46
HMGXB4-204ENST00000455359 CXXC4Q9H2H0 198 aa12.16□□□□□ -0.46
HMGXB4-204ENST00000455359 ACOT13Q9NPJ3 140 aa12.16□□□□□ -0.46
HMGXB4-204ENST00000455359 DLL4Q9NR61 685 aa12.16□□□□□ -0.46
HMGXB4-204ENST00000455359 C14orf119Q9NWQ9 140 aa12.16□□□□□ -0.46
HMGXB4-204ENST00000455359 PIGLQ9Y2B2 252 aa12.16□□□□□ -0.46
HMGXB4-204ENST00000455359 RHBDD3Q9Y3P4 386 aa12.16□□□□□ -0.46
HMGXB4-204ENST00000455359 DSCAMO60469 2012 aa12.16□□□□□ -0.46
HMGXB4-204ENST00000455359 PDZD2O15018 2839 aa12.16□□□□□ -0.46
HMGXB4-204ENST00000455359 IFNL4K9M1U5 179 aa12.15□□□□□ -0.46
HMGXB4-204ENST00000455359 MLNRO43193 412 aa12.15□□□□□ -0.46
HMGXB4-204ENST00000455359 LILRA1O75019 489 aa12.15□□□□□ -0.46
HMGXB4-204ENST00000455359 PTBP3O95758 552 aaKnown RBP12.15□□□□□ -0.46
HMGXB4-204ENST00000455359 LALBAP00709 142 aa12.15□□□□□ -0.46
HMGXB4-204ENST00000455359 SERPINA3P01011 423 aa12.15□□□□□ -0.46
HMGXB4-204ENST00000455359 IGHV4-39P01824 125 aa12.15□□□□□ -0.46
HMGXB4-204ENST00000455359 CA6P23280 308 aa12.15□□□□□ -0.46
HMGXB4-204ENST00000455359 GATA4P43694 442 aa12.15□□□□□ -0.46
HMGXB4-204ENST00000455359 EMX1Q04741 257 aaPredicted RBP12.15□□□□□ -0.46
HMGXB4-204ENST00000455359 MLLT11Q13015 90 aaPredicted RBP12.15□□□□□ -0.46
HMGXB4-204ENST00000455359 MED22Q15528 200 aa12.15□□□□□ -0.46
HMGXB4-204ENST00000455359 ODF4Q2M2E3 257 aa12.15□□□□□ -0.46
HMGXB4-204ENST00000455359 YIF1BQ5BJH7 314 aa12.15□□□□□ -0.46
HMGXB4-204ENST00000455359 CLVS2Q5SYC1 327 aa12.15□□□□□ -0.46
HMGXB4-204ENST00000455359 XAF1Q6GPH4 301 aa12.15□□□□□ -0.46
HMGXB4-204ENST00000455359 RDH10Q8IZV5 341 aa12.15□□□□□ -0.46
HMGXB4-204ENST00000455359 SPARTQ8N0X7 666 aa12.15□□□□□ -0.46
HMGXB4-204ENST00000455359 ZCCHC24Q8N2G6 241 aaKnown RBP12.15□□□□□ -0.46
HMGXB4-204ENST00000455359 GTF3AQ92664 365 aaKnown RBP12.15□□□□□ -0.46
HMGXB4-204ENST00000455359 RDH5Q92781 318 aa12.15□□□□□ -0.46
HMGXB4-204ENST00000455359 GHSRQ92847 366 aa12.15□□□□□ -0.46
HMGXB4-204ENST00000455359 PERPQ96FX8 193 aa12.15□□□□□ -0.46
HMGXB4-204ENST00000455359 HIST1H2AAQ96QV6 131 aa12.15□□□□□ -0.46
HMGXB4-204ENST00000455359 OR5M11Q96RB7 305 aa12.15□□□□□ -0.46
HMGXB4-204ENST00000455359 MICU1Q9BPX6 476 aa12.15□□□□□ -0.46
HMGXB4-204ENST00000455359 PDCD1LG2Q9BQ51 273 aa12.15□□□□□ -0.46
HMGXB4-204ENST00000455359 SOX7Q9BT81 388 aa12.15□□□□□ -0.46
HMGXB4-204ENST00000455359 ADAT1Q9BUB4 502 aaKnown RBP12.15□□□□□ -0.46
HMGXB4-204ENST00000455359 TPK1Q9H3S4 243 aa12.15□□□□□ -0.46
HMGXB4-204ENST00000455359 ZNF696Q9H7X3 374 aa12.15□□□□□ -0.46
HMGXB4-204ENST00000455359 SAP30LQ9HAJ7 183 aa12.15□□□□□ -0.46
HMGXB4-204ENST00000455359 PLEKHA1Q9HB21 404 aa12.15□□□□□ -0.46
HMGXB4-204ENST00000455359 ZNF275Q9NSD4 429 aaPredicted RBP12.15□□□□□ -0.46
HMGXB4-204ENST00000455359 SIRT4Q9Y6E7 314 aaPredicted RBP12.15□□□□□ -0.46
HMGXB4-204ENST00000455359 ARID1AO14497 2285 aa12.15□□□□□ -0.46
HMGXB4-204ENST00000455359 MAST4O15021 2626 aa12.15□□□□□ -0.46
HMGXB4-204ENST00000455359 GATBO75879 557 aaKnown RBP12.14□□□□□ -0.47
HMGXB4-204ENST00000455359 CD2P06729 351 aa12.14□□□□□ -0.47
HMGXB4-204ENST00000455359 CELP19835 753 aa12.14□□□□□ -0.47
HMGXB4-204ENST00000455359 CRYBB2P43320 205 aa12.14□□□□□ -0.47
HMGXB4-204ENST00000455359 MAGEB1P43366 347 aa12.14□□□□□ -0.47
HMGXB4-204ENST00000455359 PRSS12P56730 875 aa12.14□□□□□ -0.47
HMGXB4-204ENST00000455359 CCL8P80075 99 aa12.14□□□□□ -0.47
HMGXB4-204ENST00000455359 PRDX4Q13162 271 aa12.14□□□□□ -0.47
HMGXB4-204ENST00000455359 TPBGQ13641 420 aa12.14□□□□□ -0.47
HMGXB4-204ENST00000455359 UTS2BQ765I0 119 aa12.14□□□□□ -0.47
HMGXB4-204ENST00000455359 ZDHHC23Q8IYP9 409 aa12.14□□□□□ -0.47
HMGXB4-204ENST00000455359 OR8S1Q8NH09 359 aa12.14□□□□□ -0.47
HMGXB4-204ENST00000455359 UBASH3BQ8TF42 649 aa12.14□□□□□ -0.47
HMGXB4-204ENST00000455359 UFD1Q92890 307 aa12.14□□□□□ -0.47
HMGXB4-204ENST00000455359 PGLYRP3Q96LB9 341 aa12.14□□□□□ -0.47
HMGXB4-204ENST00000455359 TEX15Q9BXT5 2789 aa12.14□□□□□ -0.47
HMGXB4-204ENST00000455359 A0A087WXM4 84 aa12.13□□□□□ -0.47
HMGXB4-204ENST00000455359 ANKRD61A6NGH8 418 aa12.13□□□□□ -0.47
HMGXB4-204ENST00000455359 OR5B21A6NL26 309 aa12.13□□□□□ -0.47
HMGXB4-204ENST00000455359 TMEM210A6NLX4 147 aa12.13□□□□□ -0.47
HMGXB4-204ENST00000455359 NDUFS8O00217 210 aa12.13□□□□□ -0.47
HMGXB4-204ENST00000455359 TPD52L2O43399 206 aaKnown RBP12.13□□□□□ -0.47
HMGXB4-204ENST00000455359 ALX3O95076 343 aa12.13□□□□□ -0.47
HMGXB4-204ENST00000455359 NRASP01111 189 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms