RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 RNPEPL1Q9HAU8 725 aa10.72□□□□□ -0.69
CHD3-206ENST00000452447 CTSZQ9UBR2 303 aa10.72□□□□□ -0.69
CHD3-206ENST00000452447 POMPQ9Y244 141 aa10.72□□□□□ -0.69
CHD3-206ENST00000452447 ERICH4A6NGS2 130 aa10.71□□□□□ -0.69
CHD3-206ENST00000452447 TMPRSS2O15393 492 aa10.71□□□□□ -0.69
CHD3-206ENST00000452447 FKBP6O75344 327 aa10.71□□□□□ -0.69
CHD3-206ENST00000452447 DNAJC8O75937 253 aaPredicted RBP10.71□□□□□ -0.69
CHD3-206ENST00000452447 PLATP00750 562 aa10.71□□□□□ -0.69
CHD3-206ENST00000452447 LHBP01229 141 aa10.71□□□□□ -0.69
CHD3-206ENST00000452447 HKR1P10072 659 aa10.71□□□□□ -0.69
CHD3-206ENST00000452447 NAA10P41227 235 aaPredicted RBP10.71□□□□□ -0.69
CHD3-206ENST00000452447 MICBQ29980 383 aa10.71□□□□□ -0.69
CHD3-206ENST00000452447 SLC35D3Q5M8T2 416 aa10.71□□□□□ -0.69
CHD3-206ENST00000452447 PRSS45Q7RTY3 260 aa10.71□□□□□ -0.69
CHD3-206ENST00000452447 FAM90A1Q86YD7 464 aa10.71□□□□□ -0.69
CHD3-206ENST00000452447 OR1M1Q8NGA1 313 aa10.71□□□□□ -0.69
CHD3-206ENST00000452447 MICU1Q9BPX6 476 aa10.71□□□□□ -0.69
CHD3-206ENST00000452447 NIPAL2Q9H841 368 aa10.71□□□□□ -0.69
CHD3-206ENST00000452447 ZNF319Q9P2F9 582 aa10.71□□□□□ -0.69
CHD3-206ENST00000452447 LAMP5Q9UJQ1 280 aa10.71□□□□□ -0.69
CHD3-206ENST00000452447 RHBDD3Q9Y3P4 386 aa10.71□□□□□ -0.69
CHD3-206ENST00000452447 TCRBV3S1A0A5B6 114 aa10.7□□□□□ -0.7
CHD3-206ENST00000452447 CLDN34H7C241 214 aa10.7□□□□□ -0.7
CHD3-206ENST00000452447 RNASE1P07998 156 aaKnown RBP10.7□□□□□ -0.7
CHD3-206ENST00000452447 BPIFB3P59826 476 aa10.7□□□□□ -0.7
CHD3-206ENST00000452447 IL5RAQ01344 420 aa10.7□□□□□ -0.7
CHD3-206ENST00000452447 POU4F2Q12837 409 aa10.7□□□□□ -0.7
CHD3-206ENST00000452447 SLC9A3R2Q15599 337 aa10.7□□□□□ -0.7
CHD3-206ENST00000452447 SNAPC1Q16533 368 aa10.7□□□□□ -0.7
CHD3-206ENST00000452447 TEX36Q5VZQ5 186 aa10.7□□□□□ -0.7
CHD3-206ENST00000452447 TMEM236Q5W0B7 351 aa10.7□□□□□ -0.7
CHD3-206ENST00000452447 BRD3OSQ6XYD6 125 aa10.7□□□□□ -0.7
CHD3-206ENST00000452447 KRT77Q7Z794 578 aa10.7□□□□□ -0.7
CHD3-206ENST00000452447 LRRC29Q8WV35 223 aa10.7□□□□□ -0.7
CHD3-206ENST00000452447 DNAJC9Q8WXX5 260 aa10.7□□□□□ -0.7
CHD3-206ENST00000452447 ZDHHC16Q969W1 377 aa10.7□□□□□ -0.7
CHD3-206ENST00000452447 SLC7A6OSQ96CW6 309 aaPredicted RBP10.7□□□□□ -0.7
CHD3-206ENST00000452447 C1orf147Q96MC9 270 aaPredicted RBP10.7□□□□□ -0.7
CHD3-206ENST00000452447 RASSF4Q9H2L5 321 aa10.7□□□□□ -0.7
CHD3-206ENST00000452447 MPC1Q9Y5U8 109 aa10.7□□□□□ -0.7
CHD3-206ENST00000452447 IGHV3OR15-7A0A075B7D8 119 aa10.69□□□□□ -0.7
CHD3-206ENST00000452447 ZNF879B4DU55 563 aa10.69□□□□□ -0.7
CHD3-206ENST00000452447 DVL1O14640 695 aa10.69□□□□□ -0.7
CHD3-206ENST00000452447 CDIPTO14735 213 aa10.69□□□□□ -0.7
CHD3-206ENST00000452447 TNFRSF13BO14836 293 aaPredicted RBP10.69□□□□□ -0.7
CHD3-206ENST00000452447 TOX4O94842 621 aa10.69□□□□□ -0.7
CHD3-206ENST00000452447 MUC1P15941 1255 aaPredicted RBP10.69□□□□□ -0.7
CHD3-206ENST00000452447 EGR1P18146 543 aa10.69□□□□□ -0.7
CHD3-206ENST00000452447 CFHR2P36980 270 aa10.69□□□□□ -0.7
CHD3-206ENST00000452447 APOFQ13790 326 aa10.69□□□□□ -0.7
CHD3-206ENST00000452447 C11orf91Q3C1V1 193 aa10.69□□□□□ -0.7
CHD3-206ENST00000452447 METTL11BQ5VVY1 283 aa10.69□□□□□ -0.7
CHD3-206ENST00000452447 WDR86Q86TI4 376 aa10.69□□□□□ -0.7
CHD3-206ENST00000452447 C11orf53Q8IXP5 236 aa10.69□□□□□ -0.7
CHD3-206ENST00000452447 GALNT4Q8N4A0 578 aa10.69□□□□□ -0.7
CHD3-206ENST00000452447 PAPD5Q8NDF8 572 aaKnown RBP10.69□□□□□ -0.7
CHD3-206ENST00000452447 BBS1Q8NFJ9 593 aa10.69□□□□□ -0.7
CHD3-206ENST00000452447 SGMS2Q8NHU3 365 aa10.69□□□□□ -0.7
CHD3-206ENST00000452447 NRBF2Q96F24 287 aa10.69□□□□□ -0.7
CHD3-206ENST00000452447 RTL8AQ9BWD3 113 aa10.69□□□□□ -0.7
CHD3-206ENST00000452447 SLC25A19Q9HC21 320 aa10.69□□□□□ -0.7
CHD3-206ENST00000452447 SMURF1Q9HCE7 757 aa10.69□□□□□ -0.7
CHD3-206ENST00000452447 PAPOLBQ9NRJ5 636 aaKnown RBP10.69□□□□□ -0.7
CHD3-206ENST00000452447 TVP23BQ9NYZ1 205 aa10.69□□□□□ -0.7
CHD3-206ENST00000452447 KAAG1Q9UBP8 84 aa10.69□□□□□ -0.7
CHD3-206ENST00000452447 ZNF391Q9UJN7 358 aa10.69□□□□□ -0.7
CHD3-206ENST00000452447 SOX21Q9Y651 276 aaPredicted RBP10.69□□□□□ -0.7
CHD3-206ENST00000452447 ZNF850A8MQ14 1090 aa10.69□□□□□ -0.7
CHD3-206ENST00000452447 P2RY10O00398 339 aa10.69□□□□□ -0.7
CHD3-206ENST00000452447 ECDO95905 644 aaPredicted RBP10.69□□□□□ -0.7
CHD3-206ENST00000452447 SFTPBP07988 381 aa10.69□□□□□ -0.7
CHD3-206ENST00000452447 ALOX5APP20292 161 aa10.69□□□□□ -0.7
CHD3-206ENST00000452447 PSMA6P60900 246 aaKnown RBP10.69□□□□□ -0.7
CHD3-206ENST00000452447 CSNK2BP67870 215 aa10.69□□□□□ -0.7
CHD3-206ENST00000452447 PRDX4Q13162 271 aa10.69□□□□□ -0.7
CHD3-206ENST00000452447 LCN1P1Q5VSP4 162 aa10.69□□□□□ -0.7
CHD3-206ENST00000452447 KCTD18Q6PI47 426 aaPredicted RBP10.69□□□□□ -0.7
CHD3-206ENST00000452447 WDR82Q6UXN9 313 aa10.69□□□□□ -0.7
CHD3-206ENST00000452447 KCTD8Q6ZWB6 473 aa10.69□□□□□ -0.7
CHD3-206ENST00000452447 BTN2A1Q7KYR7 527 aa10.69□□□□□ -0.7
CHD3-206ENST00000452447 SLC36A1Q7Z2H8 476 aa10.69□□□□□ -0.7
CHD3-206ENST00000452447 ST8SIA4Q92187 359 aa10.69□□□□□ -0.7
CHD3-206ENST00000452447 PIGCQ92535 297 aa10.69□□□□□ -0.7
CHD3-206ENST00000452447 ITPKCQ96DU7 683 aa10.69□□□□□ -0.7
CHD3-206ENST00000452447 WDFY2Q96P53 400 aa10.69□□□□□ -0.7
CHD3-206ENST00000452447 MROQ9BYG7 248 aa10.69□□□□□ -0.7
CHD3-206ENST00000452447 PRRG3Q9BZD7 231 aa10.69□□□□□ -0.7
CHD3-206ENST00000452447 PPP1R3EQ9H7J1 279 aa10.69□□□□□ -0.7
CHD3-206ENST00000452447 ABCB9Q9NP78 766 aa10.69□□□□□ -0.7
CHD3-206ENST00000452447 KLHDC2Q9Y2U9 406 aa10.69□□□□□ -0.7
CHD3-206ENST00000452447 LRP12Q9Y561 859 aa10.69□□□□□ -0.7
CHD3-206ENST00000452447 MDFIC2A0A1B0GVS7 189 aa10.68□□□□□ -0.7
CHD3-206ENST00000452447 CST4P01036 141 aa10.68□□□□□ -0.7
CHD3-206ENST00000452447 SLC2A5P22732 501 aa10.68□□□□□ -0.7
CHD3-206ENST00000452447 HCCSP53701 268 aa10.68□□□□□ -0.7
CHD3-206ENST00000452447 CRISP1P54107 249 aa10.68□□□□□ -0.7
CHD3-206ENST00000452447 DEFB112Q30KQ8 113 aa10.68□□□□□ -0.7
CHD3-206ENST00000452447 C16orf87Q6PH81 154 aa10.68□□□□□ -0.7
CHD3-206ENST00000452447 OR8B12Q8NGG6 310 aa10.68□□□□□ -0.7
CHD3-206ENST00000452447 FAM81AQ8TBF8 368 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms