RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 PSORS1C1Q9UIG5 152 aa7.54□□□□□ -1.2
COL8A1-203ENST00000452013 COPS3Q9UNS2 423 aa7.54□□□□□ -1.2
COL8A1-203ENST00000452013 RPL36Q9Y3U8 105 aaKnown RBP7.54□□□□□ -1.2
COL8A1-203ENST00000452013 LRBAP50851 2863 aa7.53□□□□□ -1.2
COL8A1-203ENST00000452013 A0A1B0GWJ7 208 aa7.53□□□□□ -1.2
COL8A1-203ENST00000452013 A0A1W2PQL4 384 aaPredicted RBP7.53□□□□□ -1.2
COL8A1-203ENST00000452013 DAPL1A0PJW8 107 aa7.53□□□□□ -1.2
COL8A1-203ENST00000452013 IRGMA1A4Y4 181 aa7.53□□□□□ -1.2
COL8A1-203ENST00000452013 RP2O75695 350 aa7.53□□□□□ -1.2
COL8A1-203ENST00000452013 INMTO95050 263 aa7.53□□□□□ -1.2
COL8A1-203ENST00000452013 FADS2O95864 444 aaKnown RBP7.53□□□□□ -1.2
COL8A1-203ENST00000452013 LY6G6DO95868 133 aa7.53□□□□□ -1.2
COL8A1-203ENST00000452013 CDK1P06493 297 aa7.53□□□□□ -1.2
COL8A1-203ENST00000452013 GABRB1P18505 474 aa7.53□□□□□ -1.2
COL8A1-203ENST00000452013 CA6P23280 308 aa7.53□□□□□ -1.2
COL8A1-203ENST00000452013 MAP2K3P46734 347 aa7.53□□□□□ -1.2
COL8A1-203ENST00000452013 GSK3AP49840 483 aa7.53□□□□□ -1.2
COL8A1-203ENST00000452013 GZMKP49863 264 aa7.53□□□□□ -1.2
COL8A1-203ENST00000452013 FAM3AP98173 230 aa7.53□□□□□ -1.2
COL8A1-203ENST00000452013 ZNF45Q02386 682 aa7.53□□□□□ -1.2
COL8A1-203ENST00000452013 OXA1LQ15070 435 aa7.53□□□□□ -1.2
COL8A1-203ENST00000452013 OR8G1Q15617 311 aa7.53□□□□□ -1.2
COL8A1-203ENST00000452013 TRIM16LQ309B1 348 aa7.53□□□□□ -1.2
COL8A1-203ENST00000452013 GFOD2Q3B7J2 385 aa7.53□□□□□ -1.2
COL8A1-203ENST00000452013 CYB5R2Q6BCY4 276 aa7.53□□□□□ -1.2
COL8A1-203ENST00000452013 ZNF367Q7RTV3 350 aa7.53□□□□□ -1.2
COL8A1-203ENST00000452013 EGFL6Q8IUX8 553 aa7.53□□□□□ -1.2
COL8A1-203ENST00000452013 CENPSQ8N2Z9 138 aa7.53□□□□□ -1.2
COL8A1-203ENST00000452013 ACBD7Q8N6N7 88 aa7.53□□□□□ -1.2
COL8A1-203ENST00000452013 CELF2-AS1Q8N7Q2 184 aa7.53□□□□□ -1.2
COL8A1-203ENST00000452013 YIPF7Q8N8F6 280 aa7.53□□□□□ -1.2
COL8A1-203ENST00000452013 MAPK1IP1LQ8NDC0 245 aa7.53□□□□□ -1.2
COL8A1-203ENST00000452013 OR6Q1Q8NGQ2 317 aa7.53□□□□□ -1.2
COL8A1-203ENST00000452013 DYNC2LI1Q8TCX1 351 aa7.53□□□□□ -1.2
COL8A1-203ENST00000452013 HPS1Q92902 700 aa7.53□□□□□ -1.2
COL8A1-203ENST00000452013 ERGIC1Q969X5 290 aa7.53□□□□□ -1.2
COL8A1-203ENST00000452013 LGALS12Q96DT0 336 aa7.53□□□□□ -1.2
COL8A1-203ENST00000452013 MEGF10Q96KG7 1140 aa7.53□□□□□ -1.2
COL8A1-203ENST00000452013 HIST1H2AAQ96QV6 131 aa7.53□□□□□ -1.2
COL8A1-203ENST00000452013 OR2V2Q96R30 315 aa7.53□□□□□ -1.2
COL8A1-203ENST00000452013 TBX5Q99593 518 aa7.53□□□□□ -1.2
COL8A1-203ENST00000452013 PBOV1Q9GZY1 135 aa7.53□□□□□ -1.2
COL8A1-203ENST00000452013 NAA50Q9GZZ1 169 aaKnown RBP7.53□□□□□ -1.2
COL8A1-203ENST00000452013 MOB1AQ9H8S9 216 aa7.53□□□□□ -1.2
COL8A1-203ENST00000452013 C14orf119Q9NWQ9 140 aa7.53□□□□□ -1.2
COL8A1-203ENST00000452013 CCDC59Q9P031 241 aaKnown RBP7.53□□□□□ -1.2
COL8A1-203ENST00000452013 ZNF319Q9P2F9 582 aa7.53□□□□□ -1.2
COL8A1-203ENST00000452013 PPP1R3CQ9UQK1 317 aa7.53□□□□□ -1.2
COL8A1-203ENST00000452013 EXOGQ9Y2C4 368 aaKnown RBP7.53□□□□□ -1.2
COL8A1-203ENST00000452013 R4GMQ9 66 aa7.53□□□□□ -1.2
COL8A1-203ENST00000452013 RAI1Q7Z5J4 1906 aaPredicted RBP7.52□□□□□ -1.2
COL8A1-203ENST00000452013 ALPK2Q86TB3 2170 aa7.52□□□□□ -1.21
COL8A1-203ENST00000452013 A0A0U1RQV5 110 aa7.52□□□□□ -1.21
COL8A1-203ENST00000452013 C5orf63A6NC05 138 aa7.52□□□□□ -1.21
COL8A1-203ENST00000452013 LRRC30A6NM36 301 aa7.52□□□□□ -1.21
COL8A1-203ENST00000452013 F5H5P2 479 aa7.52□□□□□ -1.21
COL8A1-203ENST00000452013 LOC110117498-PIK3R3F6TDL0 507 aa7.52□□□□□ -1.21
COL8A1-203ENST00000452013 H0YL77 283 aa7.52□□□□□ -1.21
COL8A1-203ENST00000452013 MTRF1O75570 445 aaKnown RBP7.52□□□□□ -1.21
COL8A1-203ENST00000452013 APOL3O95236 402 aa7.52□□□□□ -1.21
COL8A1-203ENST00000452013 MT-ND2P03891 347 aa7.52□□□□□ -1.21
COL8A1-203ENST00000452013 IRF2P14316 349 aa7.52□□□□□ -1.21
COL8A1-203ENST00000452013 PSMB9P28065 219 aa7.52□□□□□ -1.21
COL8A1-203ENST00000452013 GNALP38405 381 aa7.52□□□□□ -1.21
COL8A1-203ENST00000452013 BCAP31P51572 246 aa7.52□□□□□ -1.21
COL8A1-203ENST00000452013 PPP5CP53041 499 aa7.52□□□□□ -1.21
COL8A1-203ENST00000452013 RAB40BQ12829 278 aa7.52□□□□□ -1.21
COL8A1-203ENST00000452013 SPCS2Q15005 226 aa7.52□□□□□ -1.21
COL8A1-203ENST00000452013 ZNF181Q2M3W8 571 aa7.52□□□□□ -1.21
COL8A1-203ENST00000452013 TMEM249Q2WGJ8 235 aa7.52□□□□□ -1.21
COL8A1-203ENST00000452013 LIPNQ5VXI9 398 aa7.52□□□□□ -1.21
COL8A1-203ENST00000452013 FAM220AQ7Z4H9 259 aa7.52□□□□□ -1.21
COL8A1-203ENST00000452013 PLPP7Q8NBV4 271 aa7.52□□□□□ -1.21
COL8A1-203ENST00000452013 OR8B12Q8NGG6 310 aa7.52□□□□□ -1.21
COL8A1-203ENST00000452013 OR56B2PQ8NGI1 322 aa7.52□□□□□ -1.21
COL8A1-203ENST00000452013 OR11L1Q8NGX0 322 aa7.52□□□□□ -1.21
COL8A1-203ENST00000452013 OR8S1Q8NH09 359 aa7.52□□□□□ -1.21
COL8A1-203ENST00000452013 CNIH3Q8TBE1 160 aa7.52□□□□□ -1.21
COL8A1-203ENST00000452013 ITLN1Q8WWA0 313 aa7.52□□□□□ -1.21
COL8A1-203ENST00000452013 SMR3AQ99954 134 aa7.52□□□□□ -1.21
COL8A1-203ENST00000452013 CDCA4Q9BXL8 241 aa7.52□□□□□ -1.21
COL8A1-203ENST00000452013 NXF2Q9GZY0 626 aaKnown RBP7.52□□□□□ -1.21
COL8A1-203ENST00000452013 GSX1Q9H4S2 264 aaPredicted RBP7.52□□□□□ -1.21
COL8A1-203ENST00000452013 ABCB9Q9NP78 766 aa7.52□□□□□ -1.21
COL8A1-203ENST00000452013 TMEM106BQ9NUM4 274 aa7.52□□□□□ -1.21
COL8A1-203ENST00000452013 MRPS18AQ9NVS2 196 aaKnown RBP7.52□□□□□ -1.21
COL8A1-203ENST00000452013 FAM206AQ9NX38 181 aa7.52□□□□□ -1.21
COL8A1-203ENST00000452013 ERVK-18Q9QC07 812 aa7.52□□□□□ -1.21
COL8A1-203ENST00000452013 NUFIP1Q9UHK0 495 aaKnown RBP7.52□□□□□ -1.21
COL8A1-203ENST00000452013 MRM2Q9UI43 246 aaKnown RBP7.52□□□□□ -1.21
COL8A1-203ENST00000452013 OR52A1Q9UKL2 312 aa7.52□□□□□ -1.21
COL8A1-203ENST00000452013 GTF2A1LQ9UNN4 478 aa7.52□□□□□ -1.21
COL8A1-203ENST00000452013 MPC1Q9Y5U8 109 aa7.52□□□□□ -1.21
COL8A1-203ENST00000452013 PEX16Q9Y5Y5 336 aa7.52□□□□□ -1.21
COL8A1-203ENST00000452013 POLQO75417 2590 aa7.52□□□□□ -1.21
COL8A1-203ENST00000452013 OTOGQ6ZRI0 2925 aa7.51□□□□□ -1.21
COL8A1-203ENST00000452013 HRNRQ86YZ3 2850 aaPredicted RBP7.51□□□□□ -1.21
COL8A1-203ENST00000452013 CSMD2Q7Z408 3487 aa7.51□□□□□ -1.21
COL8A1-203ENST00000452013 A0A096LNT2 108 aa7.51□□□□□ -1.21
COL8A1-203ENST00000452013 IGHV4-61A0A0C4DH41 118 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms