RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 A6NLC8 198 aa16.12■□□□□ 0.17
USP40-207ENST00000450940 C22orf46C9J442 243 aa16.12■□□□□ 0.17
USP40-207ENST00000450940 C3orf80F5H4A9 247 aa16.12■□□□□ 0.17
USP40-207ENST00000450940 CST4P01036 141 aa16.12■□□□□ 0.17
USP40-207ENST00000450940 UBA52P62987 128 aaKnown RBP16.12■□□□□ 0.17
USP40-207ENST00000450940 C11orf91Q3C1V1 193 aa16.12■□□□□ 0.17
USP40-207ENST00000450940 CD276Q5ZPR3 534 aa16.12■□□□□ 0.17
USP40-207ENST00000450940 C12orf54Q6X4T0 127 aa16.12■□□□□ 0.17
USP40-207ENST00000450940 FAM90A1Q86YD7 464 aa16.12■□□□□ 0.17
USP40-207ENST00000450940 BCL6BQ8N143 479 aaPredicted RBP16.12■□□□□ 0.17
USP40-207ENST00000450940 GALNT4Q8N4A0 578 aa16.12■□□□□ 0.17
USP40-207ENST00000450940 ITPKCQ96DU7 683 aa16.12■□□□□ 0.17
USP40-207ENST00000450940 PPP1R3EQ9H7J1 279 aa16.12■□□□□ 0.17
USP40-207ENST00000450940 KIF17Q9P2E2 1029 aa16.12■□□□□ 0.17
USP40-207ENST00000450940 ERVK-18Q9QC07 812 aa16.12■□□□□ 0.17
USP40-207ENST00000450940 KAAG1Q9UBP8 84 aa16.12■□□□□ 0.17
USP40-207ENST00000450940 LAMP5Q9UJQ1 280 aa16.12■□□□□ 0.17
USP40-207ENST00000450940 LRP12Q9Y561 859 aa16.12■□□□□ 0.17
USP40-207ENST00000450940 MPC1Q9Y5U8 109 aa16.12■□□□□ 0.17
USP40-207ENST00000450940 IGHV4-38-2P0DP08 117 aa16.11■□□□□ 0.17
USP40-207ENST00000450940 ACKR3P25106 362 aa16.11■□□□□ 0.17
USP40-207ENST00000450940 DCTDP32321 178 aa16.11■□□□□ 0.17
USP40-207ENST00000450940 HCCSP53701 268 aa16.11■□□□□ 0.17
USP40-207ENST00000450940 RPS7P62081 194 aaKnown RBP16.11■□□□□ 0.17
USP40-207ENST00000450940 ROM1Q03395 351 aa16.11■□□□□ 0.17
USP40-207ENST00000450940 WDR82Q6UXN9 313 aa16.11■□□□□ 0.17
USP40-207ENST00000450940 RBMS3Q6XE24 437 aaKnown RBP16.11■□□□□ 0.17
USP40-207ENST00000450940 FTMTQ8N4E7 242 aa16.11■□□□□ 0.17
USP40-207ENST00000450940 BOLLQ8N9W6 283 aaKnown RBP16.11■□□□□ 0.17
USP40-207ENST00000450940 OR8B12Q8NGG6 310 aa16.11■□□□□ 0.17
USP40-207ENST00000450940 LYZL4Q96KX0 146 aa16.11■□□□□ 0.17
USP40-207ENST00000450940 ZNF48Q96MX3 618 aaPredicted RBP16.11■□□□□ 0.17
USP40-207ENST00000450940 ABCB9Q9NP78 766 aa16.11■□□□□ 0.17
USP40-207ENST00000450940 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.1■□□□□ 0.17
USP40-207ENST00000450940 ADAM20O43506 726 aa16.1■□□□□ 0.17
USP40-207ENST00000450940 ENSAO43768 121 aaKnown RBP16.1■□□□□ 0.17
USP40-207ENST00000450940 PRKYO43930 277 aa16.1■□□□□ 0.17
USP40-207ENST00000450940 FCN3O75636 299 aa16.1■□□□□ 0.17
USP40-207ENST00000450940 LIPFP07098 398 aa16.1■□□□□ 0.17
USP40-207ENST00000450940 MUC1P15941 1255 aaPredicted RBP16.1■□□□□ 0.17
USP40-207ENST00000450940 EGR1P18146 543 aa16.1■□□□□ 0.17
USP40-207ENST00000450940 GNALP38405 381 aa16.1■□□□□ 0.17
USP40-207ENST00000450940 ACTG1P63261 375 aa16.1■□□□□ 0.17
USP40-207ENST00000450940 IL5RAQ01344 420 aa16.1■□□□□ 0.17
USP40-207ENST00000450940 GFOD2Q3B7J2 385 aa16.1■□□□□ 0.17
USP40-207ENST00000450940 FAM76BQ5HYJ3 339 aa16.1■□□□□ 0.17
USP40-207ENST00000450940 KDM4DQ6B0I6 523 aa16.1■□□□□ 0.17
USP40-207ENST00000450940 KCTD18Q6PI47 426 aaPredicted RBP16.1■□□□□ 0.17
USP40-207ENST00000450940 KRT77Q7Z794 578 aa16.1■□□□□ 0.17
USP40-207ENST00000450940 GCDHQ92947 438 aaPredicted RBP16.1■□□□□ 0.17
USP40-207ENST00000450940 C1orf147Q96MC9 270 aaPredicted RBP16.1■□□□□ 0.17
USP40-207ENST00000450940 PAPOLGQ9BWT3 736 aaKnown RBP16.1■□□□□ 0.17
USP40-207ENST00000450940 MS4A7Q9GZW8 240 aaPredicted RBP16.1■□□□□ 0.17
USP40-207ENST00000450940 GABARAPL1Q9H0R8 117 aa16.1■□□□□ 0.17
USP40-207ENST00000450940 ZMAT3Q9HA38 289 aaKnown RBP16.1■□□□□ 0.17
USP40-207ENST00000450940 SMURF1Q9HCE7 757 aa16.1■□□□□ 0.17
USP40-207ENST00000450940 AP4S1Q9Y587 144 aa16.1■□□□□ 0.17
USP40-207ENST00000450940 A0A0U1RQV5 110 aa16.09■□□□□ 0.17
USP40-207ENST00000450940 hCG_1807616A0A1W2PRN6 198 aa16.09■□□□□ 0.17
USP40-207ENST00000450940 ZAR1LA6NP61 321 aa16.09■□□□□ 0.17
USP40-207ENST00000450940 G3V2T6 193 aa16.09■□□□□ 0.17
USP40-207ENST00000450940 ZNF254O75437 659 aa16.09■□□□□ 0.17
USP40-207ENST00000450940 PRTN3P24158 256 aa16.09■□□□□ 0.17
USP40-207ENST00000450940 FASP25445 335 aa16.09■□□□□ 0.17
USP40-207ENST00000450940 CFPP27918 469 aa16.09■□□□□ 0.17
USP40-207ENST00000450940 FGF12P61328 243 aa16.09■□□□□ 0.17
USP40-207ENST00000450940 LCN1P1Q5VSP4 162 aa16.09■□□□□ 0.17
USP40-207ENST00000450940 AADACL4Q5VUY2 407 aa16.09■□□□□ 0.17
USP40-207ENST00000450940 SLX4IPQ5VYV7 408 aa16.09■□□□□ 0.17
USP40-207ENST00000450940 C12orf73Q69YU5 71 aa16.09■□□□□ 0.17
USP40-207ENST00000450940 LRRC29Q8WV35 223 aa16.09■□□□□ 0.17
USP40-207ENST00000450940 OR5P3Q8WZ94 311 aa16.09■□□□□ 0.17
USP40-207ENST00000450940 TECTBQ96PL2 329 aa16.09■□□□□ 0.17
USP40-207ENST00000450940 MICU1Q9BPX6 476 aa16.09■□□□□ 0.17
USP40-207ENST00000450940 PRRG3Q9BZD7 231 aa16.09■□□□□ 0.17
USP40-207ENST00000450940 PRDM13Q9H4Q3 707 aa16.09■□□□□ 0.17
USP40-207ENST00000450940 KRT84Q9NSB2 600 aa16.09■□□□□ 0.17
USP40-207ENST00000450940 FAM206AQ9NX38 181 aa16.09■□□□□ 0.17
USP40-207ENST00000450940 TMEM14AQ9Y6G1 99 aa16.09■□□□□ 0.17
USP40-207ENST00000450940 ANXA2P2A6NMY6 339 aa16.08■□□□□ 0.16
USP40-207ENST00000450940 PRR32B1ATL7 298 aa16.08■□□□□ 0.16
USP40-207ENST00000450940 SRRM5B3KS81 715 aa16.08■□□□□ 0.16
USP40-207ENST00000450940 CLDN34H7C241 214 aa16.08■□□□□ 0.16
USP40-207ENST00000450940 HAX1O00165 279 aa16.08■□□□□ 0.16
USP40-207ENST00000450940 MITFO75030 526 aaPredicted RBP16.08■□□□□ 0.16
USP40-207ENST00000450940 IGLV3-1P01715 115 aa16.08■□□□□ 0.16
USP40-207ENST00000450940 GYPAP02724 150 aa16.08■□□□□ 0.16
USP40-207ENST00000450940 EPHA2P29317 976 aa16.08■□□□□ 0.16
USP40-207ENST00000450940 BPIFB3P59826 476 aa16.08■□□□□ 0.16
USP40-207ENST00000450940 CSNK2BP67870 215 aa16.08■□□□□ 0.16
USP40-207ENST00000450940 PRDX4Q13162 271 aa16.08■□□□□ 0.16
USP40-207ENST00000450940 MEPCEQ7L2J0 689 aaKnown RBP16.08■□□□□ 0.16
USP40-207ENST00000450940 ZNF679Q8IYX0 411 aa16.08■□□□□ 0.16
USP40-207ENST00000450940 OR10Z1Q8NGY1 313 aa16.08■□□□□ 0.16
USP40-207ENST00000450940 ASB17Q8WXJ9 295 aa16.08■□□□□ 0.16
USP40-207ENST00000450940 OR8B4Q96RC9 309 aa16.08■□□□□ 0.16
USP40-207ENST00000450940 RTL8AQ9BWD3 113 aa16.08■□□□□ 0.16
USP40-207ENST00000450940 MROQ9BYG7 248 aa16.08■□□□□ 0.16
USP40-207ENST00000450940 NBEAL1Q6ZS30 2694 aa16.08■□□□□ 0.16
USP40-207ENST00000450940 TRAV40A0A0B4J280 105 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms