RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 CFDP00746 253 aaPredicted RBP1.99□□□□□ -2.09
USP53-202ENST00000450251 PPBPP02775 128 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 CFHP08603 1231 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 TRGC1P0CF51 173 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 SMIM17P0DL12 118 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 HNRNPA2B1P22626 353 aaKnown RBP1.99□□□□□ -2.09
USP53-202ENST00000450251 CCR2P41597 374 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 ERVK-16P61578 105 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 FOXK2Q01167 660 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 KRTCAP3Q53RY4 240 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 OR4C11Q6IEV9 310 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 ZNF770Q6IQ21 691 aaPredicted RBP1.99□□□□□ -2.09
USP53-202ENST00000450251 Q6ZSR9 355 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 CLEC20AQ6ZU45 233 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 HFE2Q6ZVN8 426 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 TSEN54Q7Z6J9 526 aaKnown RBP1.99□□□□□ -2.09
USP53-202ENST00000450251 AMIGO3Q86WK7 504 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 ACOT4Q8N9L9 421 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 OR52B4Q8NGK2 314 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 OR2Y1Q8NGV0 311 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 RPS4Y2Q8TD47 263 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 GPBAR1Q8TDU6 330 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 IL22RA2Q969J5 263 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 EID2BQ96D98 161 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 ZNF558Q96NG5 402 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 ABHD1Q96SE0 405 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 ATP6V0BQ99437 205 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 C20orf144Q9BQM9 153 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 TMEM70Q9BUB7 260 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 MENTQ9BUN1 341 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 SSBP4Q9BWG4 385 aaPredicted RBP1.99□□□□□ -2.09
USP53-202ENST00000450251 PBX4Q9BYU1 374 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 SELENOIQ9C0D9 397 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 TLNRD1Q9H1K6 362 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 LPAR2Q9HBW0 351 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 CENPMQ9NSP4 180 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 SERTAD4Q9NUC0 356 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 PIPOXQ9P0Z9 390 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 DHCR7Q9UBM7 475 aaKnown RBP1.99□□□□□ -2.09
USP53-202ENST00000450251 GABRQQ9UN88 632 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 GPR34Q9UPC5 381 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 RCL1Q9Y2P8 373 aaKnown RBP1.99□□□□□ -2.09
USP53-202ENST00000450251 LAMTOR2Q9Y2Q5 125 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 C7orf71A4D174 169 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 ASPDHA6ND91 283 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 GLOD5A6NK44 160 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 ALG1L2C9J202 215 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 K7EP13 123 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 KCNQ2O43526 872 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 RAMP3O60896 148 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 SMPD2O60906 423 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 ZNF253O75346 499 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 CLDN1O95832 211 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 LCATP04180 440 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 CD3DP04234 171 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 MELTFP08582 738 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 CT45A6P0DMU7 189 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 CT45A5P0DMU8 189 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 CT45A7P0DMV0 189 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 HIST1H1EP10412 219 aaKnown RBP1.99□□□□□ -2.09
USP53-202ENST00000450251 DCTDP32321 178 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 THBS2P35442 1172 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 GDF5P43026 501 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 CLDN18P56856 261 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 MALLQ13021 153 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 NFATC4Q14934 902 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 DOK7Q18PE1 504 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 SLC35G1Q2M3R5 365 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 PYCR3Q53H96 274 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 CT45A1Q5HYN5 189 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 RAET1LQ5VY80 246 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 TMEM268Q5VZI3 342 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 TMEM220Q6QAJ8 160 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 NHLRC1Q6VVB1 395 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 SLC39A5Q6ZMH5 540 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 PARS2Q7L3T8 475 aaKnown RBP1.99□□□□□ -2.09
USP53-202ENST00000450251 PRSS45Q7RTY3 260 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 SPNS2Q8IVW8 549 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 DCBLD1Q8N8Z6 715 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 CDRT4Q8N9R6 151 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 CLEC1AQ8NC01 280 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 CT45A3Q8NHU0 189 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 ROBO4Q8WZ75 1007 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 GPR20Q99678 358 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 RTP3Q9BQQ7 232 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 ANAPC13Q9BS18 74 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 ATG10Q9H0Y0 220 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 WDR13Q9H1Z4 485 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 HEXA-AS1Q9H8Q6 139 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 PLEKHJ1Q9NW61 149 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 CNIH4Q9P003 139 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 ABI3Q9P2A4 366 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 RABAC1Q9UI14 185 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 MRPS16Q9Y3D3 137 aaKnown RBP1.99□□□□□ -2.09
USP53-202ENST00000450251 LY75O60449 1722 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 SBF2Q86WG5 1849 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 IGHV1-69-2A0A0G2JMI3 117 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 A0A1W2PPK0 400 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 CXCL11O14625 94 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 DEGS1O15121 323 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms