RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 KCTD18Q6PI47 426 aaPredicted RBP12.71□□□□□ -0.37
CHD3-205ENST00000449744 C3orf56Q8N813 242 aa12.71□□□□□ -0.37
CHD3-205ENST00000449744 OR1M1Q8NGA1 313 aa12.71□□□□□ -0.37
CHD3-205ENST00000449744 LRRC29Q8WV35 223 aa12.71□□□□□ -0.37
CHD3-205ENST00000449744 DACT3Q96B18 629 aaPredicted RBP12.71□□□□□ -0.37
CHD3-205ENST00000449744 YIPF3Q9GZM5 350 aa12.71□□□□□ -0.37
CHD3-205ENST00000449744 ABCB9Q9NP78 766 aa12.71□□□□□ -0.37
CHD3-205ENST00000449744 ZNF391Q9UJN7 358 aa12.71□□□□□ -0.37
CHD3-205ENST00000449744 KLHDC2Q9Y2U9 406 aa12.71□□□□□ -0.37
CHD3-205ENST00000449744 RHBDD3Q9Y3P4 386 aa12.71□□□□□ -0.37
CHD3-205ENST00000449744 MPC1Q9Y5U8 109 aa12.71□□□□□ -0.37
CHD3-205ENST00000449744 DOCK11Q5JSL3 2073 aa12.71□□□□□ -0.38
CHD3-205ENST00000449744 IGHV3OR15-7A0A075B7D8 119 aa12.7□□□□□ -0.38
CHD3-205ENST00000449744 C22orf46C9J442 243 aa12.7□□□□□ -0.38
CHD3-205ENST00000449744 LHBP01229 141 aa12.7□□□□□ -0.38
CHD3-205ENST00000449744 LIPFP07098 398 aa12.7□□□□□ -0.38
CHD3-205ENST00000449744 MRPL3P09001 348 aaKnown RBP12.7□□□□□ -0.38
CHD3-205ENST00000449744 ALOX5APP20292 161 aa12.7□□□□□ -0.38
CHD3-205ENST00000449744 SLC2A5P22732 501 aa12.7□□□□□ -0.38
CHD3-205ENST00000449744 PRTN3P24158 256 aa12.7□□□□□ -0.38
CHD3-205ENST00000449744 CFPP27918 469 aa12.7□□□□□ -0.38
CHD3-205ENST00000449744 DAPP51397 102 aa12.7□□□□□ -0.38
CHD3-205ENST00000449744 FGF12P61328 243 aa12.7□□□□□ -0.38
CHD3-205ENST00000449744 PTGES3Q15185 160 aaKnown RBP12.7□□□□□ -0.38
CHD3-205ENST00000449744 MICBQ29980 383 aa12.7□□□□□ -0.38
CHD3-205ENST00000449744 TEX36Q5VZQ5 186 aa12.7□□□□□ -0.38
CHD3-205ENST00000449744 FAHD1Q6P587 224 aa12.7□□□□□ -0.38
CHD3-205ENST00000449744 KCTD8Q6ZWB6 473 aa12.7□□□□□ -0.38
CHD3-205ENST00000449744 WDR86Q86TI4 376 aa12.7□□□□□ -0.38
CHD3-205ENST00000449744 FAM90A1Q86YD7 464 aa12.7□□□□□ -0.38
CHD3-205ENST00000449744 FAM81AQ8TBF8 368 aa12.7□□□□□ -0.38
CHD3-205ENST00000449744 UTP4Q969X6 686 aaKnown RBP12.7□□□□□ -0.38
CHD3-205ENST00000449744 DUX5Q96PT3 197 aa12.7□□□□□ -0.38
CHD3-205ENST00000449744 HIST1H2AAQ96QV6 131 aa12.7□□□□□ -0.38
CHD3-205ENST00000449744 TEAD3Q99594 435 aa12.7□□□□□ -0.38
CHD3-205ENST00000449744 RTL8AQ9BWD3 113 aa12.7□□□□□ -0.38
CHD3-205ENST00000449744 MROQ9BYG7 248 aa12.7□□□□□ -0.38
CHD3-205ENST00000449744 ZMAT3Q9HA38 289 aaKnown RBP12.7□□□□□ -0.38
CHD3-205ENST00000449744 KRT84Q9NSB2 600 aa12.7□□□□□ -0.38
CHD3-205ENST00000449744 H2AFY2Q9P0M6 372 aaPredicted RBP12.7□□□□□ -0.38
CHD3-205ENST00000449744 LRP12Q9Y561 859 aa12.7□□□□□ -0.38
CHD3-205ENST00000449744 DNAJC9-AS1A6NH13 148 aa12.69□□□□□ -0.38
CHD3-205ENST00000449744 ZNF850A8MQ14 1090 aa12.69□□□□□ -0.38
CHD3-205ENST00000449744 G3V2T6 193 aa12.69□□□□□ -0.38
CHD3-205ENST00000449744 TNFRSF13BO14836 293 aaPredicted RBP12.69□□□□□ -0.38
CHD3-205ENST00000449744 TMPRSS2O15393 492 aa12.69□□□□□ -0.38
CHD3-205ENST00000449744 ATP5HO75947 161 aa12.69□□□□□ -0.38
CHD3-205ENST00000449744 MUC1P15941 1255 aaPredicted RBP12.69□□□□□ -0.38
CHD3-205ENST00000449744 EGR1P18146 543 aa12.69□□□□□ -0.38
CHD3-205ENST00000449744 FASP25445 335 aa12.69□□□□□ -0.38
CHD3-205ENST00000449744 HCCSP53701 268 aa12.69□□□□□ -0.38
CHD3-205ENST00000449744 ESRRGP62508 458 aa12.69□□□□□ -0.38
CHD3-205ENST00000449744 CSNK2BP67870 215 aa12.69□□□□□ -0.38
CHD3-205ENST00000449744 POU4F2Q12837 409 aa12.69□□□□□ -0.38
CHD3-205ENST00000449744 PRDX4Q13162 271 aa12.69□□□□□ -0.38
CHD3-205ENST00000449744 ATP6AP1Q15904 470 aa12.69□□□□□ -0.38
CHD3-205ENST00000449744 GPR157Q5UAW9 335 aa12.69□□□□□ -0.38
CHD3-205ENST00000449744 DEGS2Q6QHC5 323 aa12.69□□□□□ -0.38
CHD3-205ENST00000449744 WDR82Q6UXN9 313 aa12.69□□□□□ -0.38
CHD3-205ENST00000449744 C9orf139Q6ZV77 190 aa12.69□□□□□ -0.38
CHD3-205ENST00000449744 C11orf53Q8IXP5 236 aa12.69□□□□□ -0.38
CHD3-205ENST00000449744 GALNT4Q8N4A0 578 aa12.69□□□□□ -0.38
CHD3-205ENST00000449744 PNLDC1Q8NA58 520 aaKnown RBP12.69□□□□□ -0.38
CHD3-205ENST00000449744 OR8B12Q8NGG6 310 aa12.69□□□□□ -0.38
CHD3-205ENST00000449744 PIGCQ92535 297 aa12.69□□□□□ -0.38
CHD3-205ENST00000449744 ZNF48Q96MX3 618 aaPredicted RBP12.69□□□□□ -0.38
CHD3-205ENST00000449744 PCGF1Q9BSM1 259 aa12.69□□□□□ -0.38
CHD3-205ENST00000449744 RASSF4Q9H2L5 321 aa12.69□□□□□ -0.38
CHD3-205ENST00000449744 PPP1R3EQ9H7J1 279 aa12.69□□□□□ -0.38
CHD3-205ENST00000449744 TMEM14AQ9Y6G1 99 aa12.69□□□□□ -0.38
CHD3-205ENST00000449744 TMEM210A6NLX4 147 aa12.68□□□□□ -0.38
CHD3-205ENST00000449744 ZNF879B4DU55 563 aa12.68□□□□□ -0.38
CHD3-205ENST00000449744 PSMD9O00233 223 aa12.68□□□□□ -0.38
CHD3-205ENST00000449744 P2RY10O00398 339 aa12.68□□□□□ -0.38
CHD3-205ENST00000449744 DVL1O14640 695 aa12.68□□□□□ -0.38
CHD3-205ENST00000449744 CDIPTO14735 213 aa12.68□□□□□ -0.38
CHD3-205ENST00000449744 PRKYO43930 277 aa12.68□□□□□ -0.38
CHD3-205ENST00000449744 ECDO95905 644 aaPredicted RBP12.68□□□□□ -0.38
CHD3-205ENST00000449744 PLATP00750 562 aa12.68□□□□□ -0.38
CHD3-205ENST00000449744 CST4P01036 141 aa12.68□□□□□ -0.38
CHD3-205ENST00000449744 FOXL1Q12952 345 aa12.68□□□□□ -0.38
CHD3-205ENST00000449744 TUSC1Q2TAM9 212 aa12.68□□□□□ -0.38
CHD3-205ENST00000449744 C1orf146Q5VVC0 180 aa12.68□□□□□ -0.38
CHD3-205ENST00000449744 COMMD2Q86X83 199 aa12.68□□□□□ -0.38
CHD3-205ENST00000449744 ZDHHC13Q8IUH4 622 aa12.68□□□□□ -0.38
CHD3-205ENST00000449744 ASB17Q8WXJ9 295 aa12.68□□□□□ -0.38
CHD3-205ENST00000449744 ZDHHC16Q969W1 377 aa12.68□□□□□ -0.38
CHD3-205ENST00000449744 SLC25A28Q96A46 364 aa12.68□□□□□ -0.38
CHD3-205ENST00000449744 ITPKCQ96DU7 683 aa12.68□□□□□ -0.38
CHD3-205ENST00000449744 RNF170Q96K19 258 aa12.68□□□□□ -0.38
CHD3-205ENST00000449744 LYZL4Q96KX0 146 aa12.68□□□□□ -0.38
CHD3-205ENST00000449744 CNN2Q99439 309 aaKnown RBP12.68□□□□□ -0.38
CHD3-205ENST00000449744 SMURF1Q9HCE7 757 aa12.68□□□□□ -0.38
CHD3-205ENST00000449744 KAAG1Q9UBP8 84 aa12.68□□□□□ -0.38
CHD3-205ENST00000449744 AP4S1Q9Y587 144 aa12.68□□□□□ -0.38
CHD3-205ENST00000449744 TMEM269A0A1B0GVZ9 245 aa12.67□□□□□ -0.38
CHD3-205ENST00000449744 CCDC182A6NF36 153 aa12.67□□□□□ -0.38
CHD3-205ENST00000449744 ACOD1A6NK06 481 aa12.67□□□□□ -0.38
CHD3-205ENST00000449744 MITFO75030 526 aaPredicted RBP12.67□□□□□ -0.38
CHD3-205ENST00000449744 ZNF254O75437 659 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms