RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 PRSS48Q7RTY5 328 aa11.64□□□□□ -0.55
PDLIM2-213ENST00000448520 KLBQ86Z14 1044 aa11.64□□□□□ -0.55
PDLIM2-213ENST00000448520 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.64□□□□□ -0.55
PDLIM2-213ENST00000448520 ZNF679Q8IYX0 411 aa11.64□□□□□ -0.55
PDLIM2-213ENST00000448520 SPARTQ8N0X7 666 aa11.64□□□□□ -0.55
PDLIM2-213ENST00000448520 KLHL36Q8N4N3 616 aa11.64□□□□□ -0.55
PDLIM2-213ENST00000448520 ZNF283Q8N7M2 679 aa11.64□□□□□ -0.55
PDLIM2-213ENST00000448520 NANOGP1Q8N7R0 232 aa11.64□□□□□ -0.55
PDLIM2-213ENST00000448520 ZFP41Q8N8Y5 198 aa11.64□□□□□ -0.55
PDLIM2-213ENST00000448520 ZNF485Q8NCK3 441 aa11.64□□□□□ -0.55
PDLIM2-213ENST00000448520 OR4M2Q8NGB6 313 aa11.64□□□□□ -0.55
PDLIM2-213ENST00000448520 OR1J1Q8NGS3 322 aa11.64□□□□□ -0.55
PDLIM2-213ENST00000448520 NANPQ8TBE9 248 aa11.64□□□□□ -0.55
PDLIM2-213ENST00000448520 GCDHQ92947 438 aaPredicted RBP11.64□□□□□ -0.55
PDLIM2-213ENST00000448520 PELI1Q96FA3 418 aa11.64□□□□□ -0.55
PDLIM2-213ENST00000448520 ELMOD3Q96FG2 381 aa11.64□□□□□ -0.55
PDLIM2-213ENST00000448520 NR1H4Q96RI1 486 aaPredicted RBP11.64□□□□□ -0.55
PDLIM2-213ENST00000448520 POFUT1Q9H488 388 aa11.64□□□□□ -0.55
PDLIM2-213ENST00000448520 ZNF696Q9H7X3 374 aa11.64□□□□□ -0.55
PDLIM2-213ENST00000448520 ARHGAP32A7KAX9 2087 aa11.64□□□□□ -0.55
PDLIM2-213ENST00000448520 M0R135 149 aa11.63□□□□□ -0.55
PDLIM2-213ENST00000448520 MYL12BO14950 172 aa11.63□□□□□ -0.55
PDLIM2-213ENST00000448520 PLPP2O43688 288 aa11.63□□□□□ -0.55
PDLIM2-213ENST00000448520 NGFP01138 241 aa11.63□□□□□ -0.55
PDLIM2-213ENST00000448520 GCH1P30793 250 aa11.63□□□□□ -0.55
PDLIM2-213ENST00000448520 OTX1P32242 354 aaPredicted RBP11.63□□□□□ -0.55
PDLIM2-213ENST00000448520 ZNF81P51508 661 aa11.63□□□□□ -0.55
PDLIM2-213ENST00000448520 RIDAP52758 137 aaKnown RBP11.63□□□□□ -0.55
PDLIM2-213ENST00000448520 PRSS12P56730 875 aa11.63□□□□□ -0.55
PDLIM2-213ENST00000448520 PSMA6P60900 246 aaKnown RBP11.63□□□□□ -0.55
PDLIM2-213ENST00000448520 ERVS71-1P61550 626 aa11.63□□□□□ -0.55
PDLIM2-213ENST00000448520 GRB2P62993 217 aaKnown RBP11.63□□□□□ -0.55
PDLIM2-213ENST00000448520 ECH1Q13011 328 aa11.63□□□□□ -0.55
PDLIM2-213ENST00000448520 SNAI3Q3KNW1 292 aa11.63□□□□□ -0.55
PDLIM2-213ENST00000448520 C1orf229Q6ZS94 237 aaPredicted RBP11.63□□□□□ -0.55
PDLIM2-213ENST00000448520 RFPL4BQ6ZWI9 263 aa11.63□□□□□ -0.55
PDLIM2-213ENST00000448520 FAM57BQ71RH2 274 aa11.63□□□□□ -0.55
PDLIM2-213ENST00000448520 FAM220AQ7Z4H9 259 aa11.63□□□□□ -0.55
PDLIM2-213ENST00000448520 PEG10Q86TG7 708 aaKnown RBP11.63□□□□□ -0.55
PDLIM2-213ENST00000448520 ZNF101Q8IZC7 436 aa11.63□□□□□ -0.55
PDLIM2-213ENST00000448520 C3orf56Q8N813 242 aa11.63□□□□□ -0.55
PDLIM2-213ENST00000448520 SGMS2Q8NHU3 365 aa11.63□□□□□ -0.55
PDLIM2-213ENST00000448520 RORBQ92753 470 aa11.63□□□□□ -0.55
PDLIM2-213ENST00000448520 ZNF799Q96GE5 643 aa11.63□□□□□ -0.55
PDLIM2-213ENST00000448520 SUCNR1Q9BXA5 334 aa11.63□□□□□ -0.55
PDLIM2-213ENST00000448520 MROQ9BYG7 248 aa11.63□□□□□ -0.55
PDLIM2-213ENST00000448520 EGLN1Q9GZT9 426 aa11.63□□□□□ -0.55
PDLIM2-213ENST00000448520 SAP30LQ9HAJ7 183 aa11.63□□□□□ -0.55
PDLIM2-213ENST00000448520 CYSLTR2Q9NS75 346 aa11.63□□□□□ -0.55
PDLIM2-213ENST00000448520 CHCHD3Q9NX63 227 aaKnown RBP11.63□□□□□ -0.55
PDLIM2-213ENST00000448520 ZNF319Q9P2F9 582 aa11.63□□□□□ -0.55
PDLIM2-213ENST00000448520 GTF2A1LQ9UNN4 478 aa11.63□□□□□ -0.55
PDLIM2-213ENST00000448520 SLC22A13Q9Y226 551 aa11.63□□□□□ -0.55
PDLIM2-213ENST00000448520 LSM2Q9Y333 95 aaKnown RBP11.63□□□□□ -0.55
PDLIM2-213ENST00000448520 CAB39Q9Y376 341 aaPredicted RBP11.63□□□□□ -0.55
PDLIM2-213ENST00000448520 WIPI2Q9Y4P8 454 aa11.63□□□□□ -0.55
PDLIM2-213ENST00000448520 SIRT4Q9Y6E7 314 aaPredicted RBP11.63□□□□□ -0.55
PDLIM2-213ENST00000448520 PNMA8CA0A1B0GUJ8 204 aa11.62□□□□□ -0.55
PDLIM2-213ENST00000448520 PLSCR5A0PG75 271 aa11.62□□□□□ -0.55
PDLIM2-213ENST00000448520 H3BSH0 61 aa11.62□□□□□ -0.55
PDLIM2-213ENST00000448520 SULT1C4O75897 302 aa11.62□□□□□ -0.55
PDLIM2-213ENST00000448520 AVPP01185 164 aa11.62□□□□□ -0.55
PDLIM2-213ENST00000448520 IGHV2-5P01817 119 aa11.62□□□□□ -0.55
PDLIM2-213ENST00000448520 ANXA2P07355 339 aaKnown RBP11.62□□□□□ -0.55
PDLIM2-213ENST00000448520 ATP6V1B1P15313 513 aa11.62□□□□□ -0.55
PDLIM2-213ENST00000448520 KIR3DL2P43630 455 aa11.62□□□□□ -0.55
PDLIM2-213ENST00000448520 NANOS3P60323 173 aaKnown RBP11.62□□□□□ -0.55
PDLIM2-213ENST00000448520 ACTA2P62736 377 aa11.62□□□□□ -0.55
PDLIM2-213ENST00000448520 ACTG2P63267 376 aa11.62□□□□□ -0.55
PDLIM2-213ENST00000448520 EMX1Q04741 257 aaPredicted RBP11.62□□□□□ -0.55
PDLIM2-213ENST00000448520 TSTQ16762 297 aaKnown RBP11.62□□□□□ -0.55
PDLIM2-213ENST00000448520 AVPI1Q5T686 147 aa11.62□□□□□ -0.55
PDLIM2-213ENST00000448520 DCAF12L2Q5VW00 463 aa11.62□□□□□ -0.55
PDLIM2-213ENST00000448520 PRSS45Q7RTY3 260 aa11.62□□□□□ -0.55
PDLIM2-213ENST00000448520 C1QL2Q7Z5L3 287 aa11.62□□□□□ -0.55
PDLIM2-213ENST00000448520 SYS1Q8N2H4 156 aa11.62□□□□□ -0.55
PDLIM2-213ENST00000448520 PRSS35Q8N3Z0 413 aa11.62□□□□□ -0.55
PDLIM2-213ENST00000448520 TSPAN14Q8NG11 270 aa11.62□□□□□ -0.55
PDLIM2-213ENST00000448520 OR52N1Q8NH53 320 aa11.62□□□□□ -0.55
PDLIM2-213ENST00000448520 SPTSSAQ969W0 71 aa11.62□□□□□ -0.55
PDLIM2-213ENST00000448520 C4orf45Q96LM5 186 aa11.62□□□□□ -0.55
PDLIM2-213ENST00000448520 TMPRSS13Q9BYE2 586 aa11.62□□□□□ -0.55
PDLIM2-213ENST00000448520 ACOT13Q9NPJ3 140 aa11.62□□□□□ -0.55
PDLIM2-213ENST00000448520 FAM206AQ9NX38 181 aa11.62□□□□□ -0.55
PDLIM2-213ENST00000448520 CGGBP1Q9UFW8 167 aaPredicted RBP11.62□□□□□ -0.55
PDLIM2-213ENST00000448520 ERGIC3Q9Y282 383 aa11.62□□□□□ -0.55
PDLIM2-213ENST00000448520 SNX5Q9Y5X3 404 aa11.62□□□□□ -0.55
PDLIM2-213ENST00000448520 LOC105371242A0A075B767 164 aa11.61□□□□□ -0.55
PDLIM2-213ENST00000448520 TMEM269A0A1B0GVZ9 245 aa11.61□□□□□ -0.55
PDLIM2-213ENST00000448520 LOC110117498-PIK3R3F6TDL0 507 aa11.61□□□□□ -0.55
PDLIM2-213ENST00000448520 H3BSA7 217 aa11.61□□□□□ -0.55
PDLIM2-213ENST00000448520 TBX1O43435 398 aa11.61□□□□□ -0.55
PDLIM2-213ENST00000448520 SPRY1O43609 319 aaPredicted RBP11.61□□□□□ -0.55
PDLIM2-213ENST00000448520 ZNF254O75437 659 aa11.61□□□□□ -0.55
PDLIM2-213ENST00000448520 LCATP04180 440 aa11.61□□□□□ -0.55
PDLIM2-213ENST00000448520 ADH4P08319 380 aa11.61□□□□□ -0.55
PDLIM2-213ENST00000448520 FPR2P25090 351 aa11.61□□□□□ -0.55
PDLIM2-213ENST00000448520 TPTEP56180 551 aa11.61□□□□□ -0.55
PDLIM2-213ENST00000448520 WNT4P56705 351 aa11.61□□□□□ -0.55
PDLIM2-213ENST00000448520 MED22Q15528 200 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms