RNA–Protein interactions for RNA: ENST00000447578.6

VPS29-202, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 996 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-202ENST00000447578 P2RY2P41231 377 aa3.28□□□□□ -1.88
VPS29-202ENST00000447578 XCR1P46094 333 aa3.28□□□□□ -1.88
VPS29-202ENST00000447578 SERPINB10P48595 397 aa3.28□□□□□ -1.88
VPS29-202ENST00000447578 TPMTP51580 245 aa3.28□□□□□ -1.88
VPS29-202ENST00000447578 PSMD7P51665 324 aa3.28□□□□□ -1.88
VPS29-202ENST00000447578 CCR8P51685 355 aa3.28□□□□□ -1.88
VPS29-202ENST00000447578 DSCR10P59022 87 aa3.28□□□□□ -1.88
VPS29-202ENST00000447578 VBP1P61758 197 aa3.28□□□□□ -1.88
VPS29-202ENST00000447578 REEP5Q00765 189 aa3.28□□□□□ -1.88
VPS29-202ENST00000447578 LY6DQ14210 128 aa3.28□□□□□ -1.88
VPS29-202ENST00000447578 ZNF846Q147U1 533 aa3.28□□□□□ -1.88
VPS29-202ENST00000447578 ARHGAP19Q14CB8 494 aa3.28□□□□□ -1.88
VPS29-202ENST00000447578 PDGFRLQ15198 375 aa3.28□□□□□ -1.88
VPS29-202ENST00000447578 IRF4Q15306 451 aa3.28□□□□□ -1.88
VPS29-202ENST00000447578 MICAQ29983 383 aa3.28□□□□□ -1.88
VPS29-202ENST00000447578 RGS21Q2M5E4 152 aa3.28□□□□□ -1.88
VPS29-202ENST00000447578 C9orf66Q5T8R8 295 aa3.28□□□□□ -1.88
VPS29-202ENST00000447578 PIP5KL1Q5T9C9 394 aa3.28□□□□□ -1.88
VPS29-202ENST00000447578 KHDRBS2Q5VWX1 349 aaKnown RBP3.28□□□□□ -1.88
VPS29-202ENST00000447578 TMEM236Q5W0B7 351 aa3.28□□□□□ -1.88
VPS29-202ENST00000447578 ZNF57Q68EA5 555 aaPredicted RBP3.28□□□□□ -1.88
VPS29-202ENST00000447578 TNFAIP8L2Q6P589 184 aaPredicted RBP3.28□□□□□ -1.88
VPS29-202ENST00000447578 TPRA1Q86W33 373 aa3.28□□□□□ -1.88
VPS29-202ENST00000447578 PAQR7Q86WK9 346 aa3.28□□□□□ -1.88
VPS29-202ENST00000447578 SLC35F2Q8IXU6 374 aa3.28□□□□□ -1.88
VPS29-202ENST00000447578 SPAG16Q8N0X2 631 aa3.28□□□□□ -1.88
VPS29-202ENST00000447578 STX19Q8N4C7 294 aa3.28□□□□□ -1.88
VPS29-202ENST00000447578 OR9A4Q8NGU2 314 aa3.28□□□□□ -1.88
VPS29-202ENST00000447578 KCNG3Q8TAE7 436 aa3.28□□□□□ -1.88
VPS29-202ENST00000447578 PHF10Q8WUB8 498 aaKnown RBP3.28□□□□□ -1.88
VPS29-202ENST00000447578 GEMIN6Q8WXD5 167 aaKnown RBP3.28□□□□□ -1.88
VPS29-202ENST00000447578 KLK6Q92876 244 aa3.28□□□□□ -1.88
VPS29-202ENST00000447578 FGF13Q92913 245 aa3.28□□□□□ -1.88
VPS29-202ENST00000447578 SMARCD2Q92925 531 aa3.28□□□□□ -1.88
VPS29-202ENST00000447578 RAB8BQ92930 207 aa3.28□□□□□ -1.88
VPS29-202ENST00000447578 UCN3Q969E3 161 aa3.28□□□□□ -1.88
VPS29-202ENST00000447578 MYDGFQ969H8 173 aa3.28□□□□□ -1.88
VPS29-202ENST00000447578 EXOSC8Q96B26 276 aaKnown RBP3.28□□□□□ -1.88
VPS29-202ENST00000447578 TM4SF18Q96CE8 201 aa3.28□□□□□ -1.88
VPS29-202ENST00000447578 COX14Q96I36 57 aa3.28□□□□□ -1.88
VPS29-202ENST00000447578 PRAP1Q96NZ9 151 aa3.28□□□□□ -1.88
VPS29-202ENST00000447578 BCL7BQ9BQE9 202 aa3.28□□□□□ -1.88
VPS29-202ENST00000447578 COPS4Q9BT78 406 aa3.28□□□□□ -1.88
VPS29-202ENST00000447578 MS4A8Q9BY19 250 aa3.28□□□□□ -1.88
VPS29-202ENST00000447578 PCBD2Q9H0N5 130 aa3.28□□□□□ -1.88
VPS29-202ENST00000447578 GLIPR2Q9H4G4 154 aa3.28□□□□□ -1.88
VPS29-202ENST00000447578 XKR8Q9H6D3 395 aa3.28□□□□□ -1.88
VPS29-202ENST00000447578 ARMC7Q9H6L4 198 aa3.28□□□□□ -1.88
VPS29-202ENST00000447578 JPT2Q9H910 190 aa3.28□□□□□ -1.88
VPS29-202ENST00000447578 AMBNQ9NP70 447 aa3.28□□□□□ -1.88
VPS29-202ENST00000447578 GLRX2Q9NS18 164 aa3.28□□□□□ -1.88
VPS29-202ENST00000447578 IMP3Q9NV31 184 aaKnown RBP3.28□□□□□ -1.88
VPS29-202ENST00000447578 IMPAD1Q9NX62 359 aa3.28□□□□□ -1.88
VPS29-202ENST00000447578 ZNF226Q9NYT6 803 aa3.28□□□□□ -1.88
VPS29-202ENST00000447578 EHFQ9NZC4 300 aa3.28□□□□□ -1.88
VPS29-202ENST00000447578 PRODH2Q9UF12 536 aa3.28□□□□□ -1.88
VPS29-202ENST00000447578 MUTYHQ9UIF7 546 aa3.28□□□□□ -1.88
VPS29-202ENST00000447578 RASD1Q9Y272 281 aa3.28□□□□□ -1.88
VPS29-202ENST00000447578 AK6Q9Y3D8 172 aaKnown RBP3.28□□□□□ -1.88
VPS29-202ENST00000447578 ENPP4Q9Y6X5 453 aa3.28□□□□□ -1.88
VPS29-202ENST00000447578 SCN8AQ9UQD0 1980 aa3.28□□□□□ -1.88
VPS29-202ENST00000447578 KIAA1671Q9BY89 1806 aa3.28□□□□□ -1.88
VPS29-202ENST00000447578 TET1Q8NFU7 2136 aa3.28□□□□□ -1.89
VPS29-202ENST00000447578 ANAPC1Q9H1A4 1944 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 OBSL1O75147 1896 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 GBF1Q92538 1859 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 A0A1B0GTH9 108 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.27□□□□□ -1.89
VPS29-202ENST00000447578 SERTM2A0A1B0GWG4 89 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.27□□□□□ -1.89
VPS29-202ENST00000447578 A0A1W2PPV9 198 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 ACOD1A6NK06 481 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 CLDN24A6NM45 220 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 M0R129 80 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 KPNA4O00629 521 aaPredicted RBP3.27□□□□□ -1.89
VPS29-202ENST00000447578 SOCS3O14543 225 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 ABCD4O14678 606 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 KMOO15229 486 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 LATO43561 262 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 RNF13O43567 381 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 AIREO43918 545 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 UGT2B17O75795 530 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 IGHG3P01860 377 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 IFNW1P05000 195 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 APODP05090 189 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 STSP08842 583 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 OR12D1P0DN82 309 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 ERGP11308 486 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 GADD45AP24522 165 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 SERPINB1P30740 379 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 DRD3P35462 400 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 TGFBR1P36897 503 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 TGFBR2P37173 567 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 OPRD1P41143 372 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 SSR2P43308 183 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 ARHGDIBP52566 201 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 LIM2P55344 173 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 RND3P61587 244 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 CSNK1G2P78368 415 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 RUNX3Q13761 415 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms