RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 GPR84Q9NQS5 396 aa9.16□□□□□ -0.94
HDAC6-211ENST00000443563 TMEM106BQ9NUM4 274 aa9.16□□□□□ -0.94
HDAC6-211ENST00000443563 TREM2Q9NZC2 230 aa9.16□□□□□ -0.94
HDAC6-211ENST00000443563 NPTNQ9Y639 398 aa9.16□□□□□ -0.94
HDAC6-211ENST00000443563 YLPM1P49750 1951 aaKnown RBP9.15□□□□□ -0.94
HDAC6-211ENST00000443563 ACANP16112 2415 aa9.15□□□□□ -0.94
HDAC6-211ENST00000443563 A0A1B0GVI7 797 aa9.15□□□□□ -0.94
HDAC6-211ENST00000443563 EFCAB10A6NFE3 127 aa9.15□□□□□ -0.94
HDAC6-211ENST00000443563 J3QLW9 94 aa9.15□□□□□ -0.94
HDAC6-211ENST00000443563 CD5LO43866 347 aa9.15□□□□□ -0.94
HDAC6-211ENST00000443563 PTBP3O95758 552 aaKnown RBP9.15□□□□□ -0.94
HDAC6-211ENST00000443563 LY6G6DO95868 133 aa9.15□□□□□ -0.94
HDAC6-211ENST00000443563 HTR1AP08908 422 aa9.15□□□□□ -0.94
HDAC6-211ENST00000443563 ZNF19P17023 458 aa9.15□□□□□ -0.94
HDAC6-211ENST00000443563 MYL12AP19105 171 aa9.15□□□□□ -0.94
HDAC6-211ENST00000443563 CSNK2BP67870 215 aa9.15□□□□□ -0.94
HDAC6-211ENST00000443563 MVKQ03426 396 aa9.15□□□□□ -0.94
HDAC6-211ENST00000443563 MAB21L1Q13394 359 aa9.15□□□□□ -0.94
HDAC6-211ENST00000443563 SMN1Q16637 294 aaKnown RBP9.15□□□□□ -0.94
HDAC6-211ENST00000443563 TP53I3Q53FA7 332 aa9.15□□□□□ -0.94
HDAC6-211ENST00000443563 TMEM244Q5VVB8 128 aa9.15□□□□□ -0.94
HDAC6-211ENST00000443563 FDX2Q6P4F2 183 aa9.15□□□□□ -0.94
HDAC6-211ENST00000443563 KRT74Q7RTS7 529 aa9.15□□□□□ -0.94
HDAC6-211ENST00000443563 LHFPL3Q86UP9 236 aa9.15□□□□□ -0.94
HDAC6-211ENST00000443563 MOGAT3Q86VF5 341 aa9.15□□□□□ -0.94
HDAC6-211ENST00000443563 ZDHHC23Q8IYP9 409 aa9.15□□□□□ -0.94
HDAC6-211ENST00000443563 MUC20Q8N307 709 aaPredicted RBP9.15□□□□□ -0.94
HDAC6-211ENST00000443563 Q8TCH9 128 aa9.15□□□□□ -0.94
HDAC6-211ENST00000443563 NRG4Q8WWG1 115 aa9.15□□□□□ -0.94
HDAC6-211ENST00000443563 PIGCQ92535 297 aa9.15□□□□□ -0.94
HDAC6-211ENST00000443563 RAB39BQ96DA2 213 aa9.15□□□□□ -0.94
HDAC6-211ENST00000443563 FAM71F1Q96KD3 344 aaPredicted RBP9.15□□□□□ -0.94
HDAC6-211ENST00000443563 C4orf36Q96KX1 117 aa9.15□□□□□ -0.94
HDAC6-211ENST00000443563 RTL8AQ9BWD3 113 aa9.15□□□□□ -0.94
HDAC6-211ENST00000443563 JAM3Q9BX67 310 aa9.15□□□□□ -0.94
HDAC6-211ENST00000443563 ACOXLQ9NUZ1 547 aa9.15□□□□□ -0.94
HDAC6-211ENST00000443563 CHCHD3Q9NX63 227 aaKnown RBP9.15□□□□□ -0.94
HDAC6-211ENST00000443563 ERVK13-1Q9NX77 482 aa9.15□□□□□ -0.94
HDAC6-211ENST00000443563 CNOT2Q9NZN8 540 aaKnown RBP9.15□□□□□ -0.94
HDAC6-211ENST00000443563 ENPP5Q9UJA9 477 aa9.15□□□□□ -0.94
HDAC6-211ENST00000443563 PIGLQ9Y2B2 252 aa9.15□□□□□ -0.94
HDAC6-211ENST00000443563 MYRFQ9Y2G1 1151 aa9.15□□□□□ -0.94
HDAC6-211ENST00000443563 EXOSC1Q9Y3B2 195 aaKnown RBP9.15□□□□□ -0.94
HDAC6-211ENST00000443563 RHBDD3Q9Y3P4 386 aa9.15□□□□□ -0.94
HDAC6-211ENST00000443563 WIPI2Q9Y4P8 454 aa9.15□□□□□ -0.94
HDAC6-211ENST00000443563 CACNG2Q9Y698 323 aa9.15□□□□□ -0.94
HDAC6-211ENST00000443563 TEP1Q99973 2627 aaKnown RBP9.15□□□□□ -0.95
HDAC6-211ENST00000443563 ISPDA4D126 451 aa9.14□□□□□ -0.95
HDAC6-211ENST00000443563 TMEM210A6NLX4 147 aa9.14□□□□□ -0.95
HDAC6-211ENST00000443563 ZNF850A8MQ14 1090 aa9.14□□□□□ -0.95
HDAC6-211ENST00000443563 TMEM178BH3BS89 294 aa9.14□□□□□ -0.95
HDAC6-211ENST00000443563 P2RY10O00398 339 aa9.14□□□□□ -0.95
HDAC6-211ENST00000443563 SYT7O43581 403 aa9.14□□□□□ -0.95
HDAC6-211ENST00000443563 FSTL3O95633 263 aa9.14□□□□□ -0.95
HDAC6-211ENST00000443563 GRPP07492 148 aa9.14□□□□□ -0.95
HDAC6-211ENST00000443563 GNAO1P09471 354 aa9.14□□□□□ -0.95
HDAC6-211ENST00000443563 IGHV4-31P0DP07 118 aa9.14□□□□□ -0.95
HDAC6-211ENST00000443563 PIPP12273 146 aaPredicted RBP9.14□□□□□ -0.95
HDAC6-211ENST00000443563 CCL1P22362 96 aa9.14□□□□□ -0.95
HDAC6-211ENST00000443563 CPT2P23786 658 aa9.14□□□□□ -0.95
HDAC6-211ENST00000443563 ACKR3P25106 362 aa9.14□□□□□ -0.95
HDAC6-211ENST00000443563 CCR9P51686 369 aa9.14□□□□□ -0.95
HDAC6-211ENST00000443563 GBX2P52951 348 aaPredicted RBP9.14□□□□□ -0.95
HDAC6-211ENST00000443563 AQP4P55087 323 aa9.14□□□□□ -0.95
HDAC6-211ENST00000443563 CDH15P55291 814 aa9.14□□□□□ -0.95
HDAC6-211ENST00000443563 OR12D2P58182 307 aa9.14□□□□□ -0.95
HDAC6-211ENST00000443563 BTG1P62324 171 aa9.14□□□□□ -0.95
HDAC6-211ENST00000443563 PRDX4Q13162 271 aa9.14□□□□□ -0.95
HDAC6-211ENST00000443563 SPRNQ5BIV9 151 aa9.14□□□□□ -0.95
HDAC6-211ENST00000443563 C6orf52Q5T4I8 152 aa9.14□□□□□ -0.95
HDAC6-211ENST00000443563 AVPI1Q5T686 147 aa9.14□□□□□ -0.95
HDAC6-211ENST00000443563 TMPRSS11AQ6ZMR5 421 aa9.14□□□□□ -0.95
HDAC6-211ENST00000443563 Q6ZSR3 168 aa9.14□□□□□ -0.95
HDAC6-211ENST00000443563 KLHL36Q8N4N3 616 aa9.14□□□□□ -0.95
HDAC6-211ENST00000443563 SPICQ8N5J4 248 aa9.14□□□□□ -0.95
HDAC6-211ENST00000443563 OR2G2Q8NGZ5 317 aa9.14□□□□□ -0.95
HDAC6-211ENST00000443563 CLDND2Q8NHS1 167 aa9.14□□□□□ -0.95
HDAC6-211ENST00000443563 ZNF420Q8TAQ5 688 aaPredicted RBP9.14□□□□□ -0.95
HDAC6-211ENST00000443563 C10orf35Q96D05 121 aa9.14□□□□□ -0.95
HDAC6-211ENST00000443563 TMEM80Q96HE8 168 aa9.14□□□□□ -0.95
HDAC6-211ENST00000443563 SMR3AQ99954 134 aa9.14□□□□□ -0.95
HDAC6-211ENST00000443563 GAL3ST1Q99999 423 aa9.14□□□□□ -0.95
HDAC6-211ENST00000443563 GSX1Q9H4S2 264 aaPredicted RBP9.14□□□□□ -0.95
HDAC6-211ENST00000443563 PLEKHA1Q9HB21 404 aa9.14□□□□□ -0.95
HDAC6-211ENST00000443563 TRIM36Q9NQ86 728 aa9.14□□□□□ -0.95
HDAC6-211ENST00000443563 PLCXD1Q9NUJ7 323 aa9.14□□□□□ -0.95
HDAC6-211ENST00000443563 RNF7Q9UBF6 113 aa9.14□□□□□ -0.95
HDAC6-211ENST00000443563 DIMT1Q9UNQ2 313 aaKnown RBP9.14□□□□□ -0.95
HDAC6-211ENST00000443563 SLC22A13Q9Y226 551 aa9.14□□□□□ -0.95
HDAC6-211ENST00000443563 CAB39Q9Y376 341 aaPredicted RBP9.14□□□□□ -0.95
HDAC6-211ENST00000443563 V9GYS6 101 aa9.14□□□□□ -0.95
HDAC6-211ENST00000443563 NF1P21359 2839 aa9.14□□□□□ -0.95
HDAC6-211ENST00000443563 NSD1Q96L73 2696 aaPredicted RBP9.13□□□□□ -0.95
HDAC6-211ENST00000443563 LOC100289279A0A1B0GTE1 492 aa9.13□□□□□ -0.95
HDAC6-211ENST00000443563 A0A1B0GTI1 187 aa9.13□□□□□ -0.95
HDAC6-211ENST00000443563 LRP5LA4QPB2 252 aa9.13□□□□□ -0.95
HDAC6-211ENST00000443563 A6NLC8 198 aa9.13□□□□□ -0.95
HDAC6-211ENST00000443563 IGHV2-70P01814 119 aa9.13□□□□□ -0.95
HDAC6-211ENST00000443563 ISG15P05161 165 aa9.13□□□□□ -0.95
HDAC6-211ENST00000443563 CCDC159P0C7I6 412 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms