RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 TFAP2EQ6VUC0 442 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 ZNF782Q6ZMW2 699 aaPredicted RBP5.25□□□□□ -1.57
VPS50-205ENST00000441602 SPACA3Q8IXA5 215 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 C17orf78Q8N4C9 275 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 OR4D6Q8NGJ1 314 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 OR5M9Q8NGP3 310 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 OR56B4Q8NH76 319 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 POM121Q96HA1 1249 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 GPR137Q96N19 417 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 TUBG2Q9NRH3 451 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 GPR173Q9NS66 373 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 ING3Q9NXR8 418 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 PLEKHA6Q9Y2H5 1048 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 AMDHD2Q9Y303 409 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 CSAG2Q9Y5P2 127 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 C5orf49A4QMS7 147 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 TMEM14DPA8MWL7 114 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 TCRBP04435 133 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 TMIGD3P0DMS9 266 aaPredicted RBP5.25□□□□□ -1.57
VPS50-205ENST00000441602 TBPP20226 339 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 PTGFRP43088 359 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 P2RY6Q15077 328 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 ZMYND11Q15326 602 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 RSU1Q15404 277 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 Q6ZT83 130 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 BEND4Q6ZU67 534 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 GABRG1Q8N1C3 465 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 TMEM229BQ8NBD8 167 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 ACBD4Q8NC06 268 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 OR10R2Q8NGX6 335 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 CCDC107Q8WV48 283 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 PIGCQ92535 297 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 LYZL4Q96KX0 146 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 MARVELD1Q9BSK0 173 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 MED28Q9H204 178 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 HRASLSQ9HDD0 168 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 ZNF319Q9P2F9 582 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 DKK4Q9UBT3 224 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 SCP2D1Q9UJQ7 156 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 RBMX2Q9Y388 322 aaKnown RBP5.25□□□□□ -1.57
VPS50-205ENST00000441602 hCG_38984A0A1B0GV85 526 aa5.24□□□□□ -1.57
VPS50-205ENST00000441602 UBE2QL1A1L167 161 aa5.24□□□□□ -1.57
VPS50-205ENST00000441602 PRRG2O14669 202 aa5.24□□□□□ -1.57
VPS50-205ENST00000441602 VSIG8P0DPA2 414 aa5.24□□□□□ -1.57
VPS50-205ENST00000441602 PSMB1P20618 241 aaKnown RBP5.24□□□□□ -1.57
VPS50-205ENST00000441602 ALDH3B1P43353 468 aa5.24□□□□□ -1.57
VPS50-205ENST00000441602 EIF2B2P49770 351 aaKnown RBP5.24□□□□□ -1.57
VPS50-205ENST00000441602 ARFRP1Q13795 201 aa5.24□□□□□ -1.57
VPS50-205ENST00000441602 SNAI3Q3KNW1 292 aa5.24□□□□□ -1.57
VPS50-205ENST00000441602 Q6ZTK2 550 aa5.24□□□□□ -1.57
VPS50-205ENST00000441602 C1orf174Q8IYL3 243 aa5.24□□□□□ -1.57
VPS50-205ENST00000441602 OR51T1Q8NGJ9 327 aa5.24□□□□□ -1.57
VPS50-205ENST00000441602 GPX8Q8TED1 209 aa5.24□□□□□ -1.57
VPS50-205ENST00000441602 NPRL2Q8WTW4 380 aa5.24□□□□□ -1.57
VPS50-205ENST00000441602 SPSB4Q96A44 273 aa5.24□□□□□ -1.57
VPS50-205ENST00000441602 RAB3CQ96E17 227 aa5.24□□□□□ -1.57
VPS50-205ENST00000441602 GAL3ST1Q99999 423 aa5.24□□□□□ -1.57
VPS50-205ENST00000441602 FAM230AA0A1W2PPH8 454 aa5.24□□□□□ -1.57
VPS50-205ENST00000441602 CDC14BO60729 498 aa5.24□□□□□ -1.57
VPS50-205ENST00000441602 RAB3DO95716 219 aa5.24□□□□□ -1.57
VPS50-205ENST00000441602 MT-ND4P03905 459 aa5.24□□□□□ -1.57
VPS50-205ENST00000441602 IFNA6P05013 189 aa5.24□□□□□ -1.57
VPS50-205ENST00000441602 ADRB1P08588 477 aa5.24□□□□□ -1.57
VPS50-205ENST00000441602 IL32P24001 234 aa5.24□□□□□ -1.57
VPS50-205ENST00000441602 GIFP27352 417 aa5.24□□□□□ -1.57
VPS50-205ENST00000441602 VEGFCP49767 419 aa5.24□□□□□ -1.57
VPS50-205ENST00000441602 EFNB2P52799 333 aa5.24□□□□□ -1.57
VPS50-205ENST00000441602 OR8B8Q15620 311 aa5.24□□□□□ -1.57
VPS50-205ENST00000441602 TATDN3Q17R31 274 aa5.24□□□□□ -1.57
VPS50-205ENST00000441602 CDNFQ49AH0 187 aa5.24□□□□□ -1.57
VPS50-205ENST00000441602 SLC22A6Q4U2R8 563 aa5.24□□□□□ -1.57
VPS50-205ENST00000441602 PLA1AQ53H76 456 aa5.24□□□□□ -1.57
VPS50-205ENST00000441602 RNASE10Q5GAN6 216 aaKnown RBP5.24□□□□□ -1.57
VPS50-205ENST00000441602 ASPHD2Q6ICH7 369 aa5.24□□□□□ -1.57
VPS50-205ENST00000441602 PLXDC2Q6UX71 529 aa5.24□□□□□ -1.57
VPS50-205ENST00000441602 NAA40Q86UY6 237 aa5.24□□□□□ -1.57
VPS50-205ENST00000441602 ZSCAN4Q8NAM6 433 aaPredicted RBP5.24□□□□□ -1.57
VPS50-205ENST00000441602 SLC30A7Q8NEW0 376 aa5.24□□□□□ -1.57
VPS50-205ENST00000441602 OR2AE1Q8NHA4 323 aa5.24□□□□□ -1.57
VPS50-205ENST00000441602 MRPS24Q96EL2 167 aaKnown RBP5.24□□□□□ -1.57
VPS50-205ENST00000441602 MPC1Q9Y5U8 109 aa5.24□□□□□ -1.57
VPS50-205ENST00000441602 MED12Q93074 2177 aa5.24□□□□□ -1.57
VPS50-205ENST00000441602 MED13Q9UHV7 2174 aa5.24□□□□□ -1.57
VPS50-205ENST00000441602 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.24□□□□□ -1.57
VPS50-205ENST00000441602 MBD3L4A6NDZ8 208 aaPredicted RBP5.24□□□□□ -1.57
VPS50-205ENST00000441602 MBD3L3A6NE82 208 aaPredicted RBP5.24□□□□□ -1.57
VPS50-205ENST00000441602 MBD3L5A6NJ08 208 aaPredicted RBP5.24□□□□□ -1.57
VPS50-205ENST00000441602 ZNF736B4DX44 427 aaPredicted RBP5.24□□□□□ -1.57
VPS50-205ENST00000441602 K7ENP7 123 aa5.24□□□□□ -1.57
VPS50-205ENST00000441602 LANCL1O43813 399 aa5.24□□□□□ -1.57
VPS50-205ENST00000441602 CA11O75493 328 aa5.24□□□□□ -1.57
VPS50-205ENST00000441602 HTR3BO95264 441 aa5.24□□□□□ -1.57
VPS50-205ENST00000441602 CBR1P16152 277 aa5.24□□□□□ -1.57
VPS50-205ENST00000441602 OR3A4PP47883 348 aa5.24□□□□□ -1.57
VPS50-205ENST00000441602 RSPO1Q2MKA7 263 aaPredicted RBP5.24□□□□□ -1.57
VPS50-205ENST00000441602 METTL11BQ5VVY1 283 aa5.24□□□□□ -1.57
VPS50-205ENST00000441602 STEAP1BQ6NZ63 245 aa5.24□□□□□ -1.57
VPS50-205ENST00000441602 COLCA1Q6ZS62 124 aa5.24□□□□□ -1.57
VPS50-205ENST00000441602 TRAPPC6BQ86SZ2 158 aa5.24□□□□□ -1.57
VPS50-205ENST00000441602 MDP1Q86V88 176 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms