RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 IGHV4-38-2P0DP08 117 aa16.54■□□□□ 0.24
SHROOM1-204ENST00000440118 PSMB10P40306 273 aa16.54■□□□□ 0.24
SHROOM1-204ENST00000440118 MTNR1AP48039 350 aa16.54■□□□□ 0.24
SHROOM1-204ENST00000440118 UBA52P62987 128 aaKnown RBP16.54■□□□□ 0.24
SHROOM1-204ENST00000440118 BAMBIQ13145 260 aa16.54■□□□□ 0.24
SHROOM1-204ENST00000440118 PRSS45Q7RTY3 260 aa16.54■□□□□ 0.24
SHROOM1-204ENST00000440118 C3orf56Q8N813 242 aa16.54■□□□□ 0.24
SHROOM1-204ENST00000440118 OR1M1Q8NGA1 313 aa16.54■□□□□ 0.24
SHROOM1-204ENST00000440118 DUX5Q96PT3 197 aa16.54■□□□□ 0.24
SHROOM1-204ENST00000440118 MROQ9BYG7 248 aa16.54■□□□□ 0.24
SHROOM1-204ENST00000440118 YIPF3Q9GZM5 350 aa16.54■□□□□ 0.24
SHROOM1-204ENST00000440118 ABCB9Q9NP78 766 aa16.54■□□□□ 0.24
SHROOM1-204ENST00000440118 ESM1Q9NQ30 184 aa16.54■□□□□ 0.24
SHROOM1-204ENST00000440118 RHBDD3Q9Y3P4 386 aa16.54■□□□□ 0.24
SHROOM1-204ENST00000440118 IGHV3OR15-7A0A075B7D8 119 aa16.53■□□□□ 0.24
SHROOM1-204ENST00000440118 KIR2DS1A0A191URI9 304 aa16.53■□□□□ 0.24
SHROOM1-204ENST00000440118 G3V2T6 193 aa16.53■□□□□ 0.24
SHROOM1-204ENST00000440118 TMPRSS2O15393 492 aa16.53■□□□□ 0.24
SHROOM1-204ENST00000440118 SLC2A5P22732 501 aa16.53■□□□□ 0.24
SHROOM1-204ENST00000440118 FGF12P61328 243 aa16.53■□□□□ 0.24
SHROOM1-204ENST00000440118 ESRRGP62508 458 aa16.53■□□□□ 0.24
SHROOM1-204ENST00000440118 CSNK2BP67870 215 aa16.53■□□□□ 0.24
SHROOM1-204ENST00000440118 PAX2Q02962 417 aa16.53■□□□□ 0.24
SHROOM1-204ENST00000440118 PTGES3Q15185 160 aaKnown RBP16.53■□□□□ 0.24
SHROOM1-204ENST00000440118 ATP6AP1Q15904 470 aa16.53■□□□□ 0.24
SHROOM1-204ENST00000440118 MICBQ29980 383 aa16.53■□□□□ 0.24
SHROOM1-204ENST00000440118 GPR157Q5UAW9 335 aa16.53■□□□□ 0.24
SHROOM1-204ENST00000440118 FAHD1Q6P587 224 aa16.53■□□□□ 0.24
SHROOM1-204ENST00000440118 DOK3Q7L591 496 aa16.53■□□□□ 0.24
SHROOM1-204ENST00000440118 BCL6BQ8N143 479 aaPredicted RBP16.53■□□□□ 0.24
SHROOM1-204ENST00000440118 GCSAMQ8N6F7 178 aa16.53■□□□□ 0.24
SHROOM1-204ENST00000440118 ZDHHC22Q8N966 263 aa16.53■□□□□ 0.24
SHROOM1-204ENST00000440118 OR8B12Q8NGG6 310 aa16.53■□□□□ 0.24
SHROOM1-204ENST00000440118 UPRTQ96BW1 309 aa16.53■□□□□ 0.24
SHROOM1-204ENST00000440118 CNN2Q99439 309 aaKnown RBP16.53■□□□□ 0.24
SHROOM1-204ENST00000440118 PCGF1Q9BSM1 259 aa16.53■□□□□ 0.24
SHROOM1-204ENST00000440118 TTTY10Q9BZA0 68 aa16.53■□□□□ 0.24
SHROOM1-204ENST00000440118 ZMAT3Q9HA38 289 aaKnown RBP16.53■□□□□ 0.24
SHROOM1-204ENST00000440118 H2AFY2Q9P0M6 372 aaPredicted RBP16.53■□□□□ 0.24
SHROOM1-204ENST00000440118 ZNF319Q9P2F9 582 aa16.53■□□□□ 0.24
SHROOM1-204ENST00000440118 CTSZQ9UBR2 303 aa16.53■□□□□ 0.24
SHROOM1-204ENST00000440118 ENOPH1Q9UHY7 261 aa16.53■□□□□ 0.24
SHROOM1-204ENST00000440118 ZNF391Q9UJN7 358 aa16.53■□□□□ 0.24
SHROOM1-204ENST00000440118 IKZF2Q9UKS7 526 aa16.53■□□□□ 0.24
SHROOM1-204ENST00000440118 MPC1Q9Y5U8 109 aa16.53■□□□□ 0.24
SHROOM1-204ENST00000440118 TMEM14AQ9Y6G1 99 aa16.53■□□□□ 0.24
SHROOM1-204ENST00000440118 TENM1Q9UKZ4 2725 aa16.52■□□□□ 0.24
SHROOM1-204ENST00000440118 DNAJC9-AS1A6NH13 148 aa16.52■□□□□ 0.24
SHROOM1-204ENST00000440118 ZNF850A8MQ14 1090 aa16.52■□□□□ 0.24
SHROOM1-204ENST00000440118 C22orf46C9J442 243 aa16.52■□□□□ 0.24
SHROOM1-204ENST00000440118 PSMD9O00233 223 aa16.52■□□□□ 0.24
SHROOM1-204ENST00000440118 CIB2O75838 187 aa16.52■□□□□ 0.24
SHROOM1-204ENST00000440118 FCGR1AP12314 374 aa16.52■□□□□ 0.24
SHROOM1-204ENST00000440118 EGR1P18146 543 aa16.52■□□□□ 0.24
SHROOM1-204ENST00000440118 FASP25445 335 aa16.52■□□□□ 0.24
SHROOM1-204ENST00000440118 DAPP51397 102 aa16.52■□□□□ 0.24
SHROOM1-204ENST00000440118 GMFBP60983 142 aa16.52■□□□□ 0.24
SHROOM1-204ENST00000440118 POU4F2Q12837 409 aa16.52■□□□□ 0.24
SHROOM1-204ENST00000440118 PRDX4Q13162 271 aa16.52■□□□□ 0.24
SHROOM1-204ENST00000440118 ZNF829Q3KNS6 432 aaPredicted RBP16.52■□□□□ 0.24
SHROOM1-204ENST00000440118 FAM90A1Q86YD7 464 aa16.52■□□□□ 0.24
SHROOM1-204ENST00000440118 ZDHHC13Q8IUH4 622 aa16.52■□□□□ 0.24
SHROOM1-204ENST00000440118 PNLDC1Q8NA58 520 aaKnown RBP16.52■□□□□ 0.24
SHROOM1-204ENST00000440118 ST8SIA4Q92187 359 aa16.52■□□□□ 0.24
SHROOM1-204ENST00000440118 PIGCQ92535 297 aa16.52■□□□□ 0.24
SHROOM1-204ENST00000440118 UTP4Q969X6 686 aaKnown RBP16.52■□□□□ 0.24
SHROOM1-204ENST00000440118 HIST1H2AAQ96QV6 131 aa16.52■□□□□ 0.24
SHROOM1-204ENST00000440118 RNPEPL1Q9HAU8 725 aa16.52■□□□□ 0.24
SHROOM1-204ENST00000440118 DNAJB11Q9UBS4 358 aa16.52■□□□□ 0.24
SHROOM1-204ENST00000440118 GTF2A1LQ9UNN4 478 aa16.52■□□□□ 0.24
SHROOM1-204ENST00000440118 NBEAL1Q6ZS30 2694 aa16.52■□□□□ 0.23
SHROOM1-204ENST00000440118 TMEM269A0A1B0GVZ9 245 aa16.51■□□□□ 0.23
SHROOM1-204ENST00000440118 ALOX5APP20292 161 aa16.51■□□□□ 0.23
SHROOM1-204ENST00000440118 HCCSP53701 268 aa16.51■□□□□ 0.23
SHROOM1-204ENST00000440118 METTL11BQ5VVY1 283 aa16.51■□□□□ 0.23
SHROOM1-204ENST00000440118 ZNF841Q6ZN19 808 aa16.51■□□□□ 0.23
SHROOM1-204ENST00000440118 WDR86Q86TI4 376 aa16.51■□□□□ 0.23
SHROOM1-204ENST00000440118 ZDHHC23Q8IYP9 409 aa16.51■□□□□ 0.23
SHROOM1-204ENST00000440118 GALNT4Q8N4A0 578 aa16.51■□□□□ 0.23
SHROOM1-204ENST00000440118 TEAD3Q99594 435 aa16.51■□□□□ 0.23
SHROOM1-204ENST00000440118 PKP2Q99959 881 aa16.51■□□□□ 0.23
SHROOM1-204ENST00000440118 AP4S1Q9Y587 144 aa16.51■□□□□ 0.23
SHROOM1-204ENST00000440118 TMEM210A6NLX4 147 aa16.5■□□□□ 0.23
SHROOM1-204ENST00000440118 CDIPTO14735 213 aa16.5■□□□□ 0.23
SHROOM1-204ENST00000440118 PRKYO43930 277 aa16.5■□□□□ 0.23
SHROOM1-204ENST00000440118 LIPFP07098 398 aa16.5■□□□□ 0.23
SHROOM1-204ENST00000440118 MUC1P15941 1255 aaPredicted RBP16.5■□□□□ 0.23
SHROOM1-204ENST00000440118 PRTN3P24158 256 aa16.5■□□□□ 0.23
SHROOM1-204ENST00000440118 CFPP27918 469 aa16.5■□□□□ 0.23
SHROOM1-204ENST00000440118 RIDAP52758 137 aaKnown RBP16.5■□□□□ 0.23
SHROOM1-204ENST00000440118 WDR82Q6UXN9 313 aa16.5■□□□□ 0.23
SHROOM1-204ENST00000440118 SLC36A1Q7Z2H8 476 aa16.5■□□□□ 0.23
SHROOM1-204ENST00000440118 THAP5Q7Z6K1 395 aa16.5■□□□□ 0.23
SHROOM1-204ENST00000440118 TCEANCQ8N8B7 351 aa16.5■□□□□ 0.23
SHROOM1-204ENST00000440118 ASB17Q8WXJ9 295 aa16.5■□□□□ 0.23
SHROOM1-204ENST00000440118 ZDHHC16Q969W1 377 aa16.5■□□□□ 0.23
SHROOM1-204ENST00000440118 SLC25A28Q96A46 364 aa16.5■□□□□ 0.23
SHROOM1-204ENST00000440118 ITPKCQ96DU7 683 aa16.5■□□□□ 0.23
SHROOM1-204ENST00000440118 RNF170Q96K19 258 aa16.5■□□□□ 0.23
SHROOM1-204ENST00000440118 SMURF1Q9HCE7 757 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms