RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 A0A0G2JMP0 313 aa19.8■□□□□ 0.76
VARS-217ENST00000440048 A0A0X1KG70 313 aa19.8■□□□□ 0.76
VARS-217ENST00000440048 A6NLC8 198 aa19.8■□□□□ 0.76
VARS-217ENST00000440048 SRSF10O75494 262 aaKnown RBP19.8■□□□□ 0.76
VARS-217ENST00000440048 WNT2P09544 360 aa19.8■□□□□ 0.76
VARS-217ENST00000440048 EGR3Q06889 387 aa19.8■□□□□ 0.76
VARS-217ENST00000440048 DCAF12L2Q5VW00 463 aa19.8■□□□□ 0.76
VARS-217ENST00000440048 ZBTB49Q6ZSB9 765 aa19.8■□□□□ 0.76
VARS-217ENST00000440048 ZNF826PQ6ZT77 177 aa19.8■□□□□ 0.76
VARS-217ENST00000440048 SSX6Q7RTT6 188 aa19.8■□□□□ 0.76
VARS-217ENST00000440048 WDR86Q86TI4 376 aa19.8■□□□□ 0.76
VARS-217ENST00000440048 FTMTQ8N4E7 242 aa19.8■□□□□ 0.76
VARS-217ENST00000440048 C19orf18Q8NEA5 215 aa19.8■□□□□ 0.76
VARS-217ENST00000440048 OR4M2Q8NGB6 313 aa19.8■□□□□ 0.76
VARS-217ENST00000440048 PPP1R14AQ96A00 147 aa19.8■□□□□ 0.76
VARS-217ENST00000440048 NUFIP1Q9UHK0 495 aaKnown RBP19.8■□□□□ 0.76
VARS-217ENST00000440048 CST4P01036 141 aa19.79■□□□□ 0.76
VARS-217ENST00000440048 OR2T7P0C7T2 308 aa19.79■□□□□ 0.76
VARS-217ENST00000440048 SNRPGP62308 76 aaKnown RBP19.79■□□□□ 0.76
VARS-217ENST00000440048 PLEKHG7Q6ZR37 379 aa19.79■□□□□ 0.76
VARS-217ENST00000440048 DEFB108BQ8NET1 73 aa19.79■□□□□ 0.76
VARS-217ENST00000440048 OR2T27Q8NH04 317 aa19.79■□□□□ 0.76
VARS-217ENST00000440048 STMN2Q93045 179 aa19.79■□□□□ 0.76
VARS-217ENST00000440048 TMPRSS13Q9BYE2 586 aa19.79■□□□□ 0.76
VARS-217ENST00000440048 MPC1Q9Y5U8 109 aa19.79■□□□□ 0.76
VARS-217ENST00000440048 A0A1W2PQL4 384 aaPredicted RBP19.78■□□□□ 0.76
VARS-217ENST00000440048 ZNF850A8MQ14 1090 aa19.78■□□□□ 0.76
VARS-217ENST00000440048 LOC110117498-PIK3R3F6TDL0 507 aa19.78■□□□□ 0.76
VARS-217ENST00000440048 ENTPD6O75354 484 aa19.78■□□□□ 0.76
VARS-217ENST00000440048 AVPP01185 164 aa19.78■□□□□ 0.76
VARS-217ENST00000440048 IGLV3-1P01715 115 aa19.78■□□□□ 0.76
VARS-217ENST00000440048 RPS2P15880 293 aaKnown RBP19.78■□□□□ 0.76
VARS-217ENST00000440048 ATP6V1E1P36543 226 aa19.78■□□□□ 0.76
VARS-217ENST00000440048 MAP2K3P46734 347 aa19.78■□□□□ 0.76
VARS-217ENST00000440048 PRDX4Q13162 271 aa19.78■□□□□ 0.76
VARS-217ENST00000440048 ESCO2Q56NI9 601 aa19.78■□□□□ 0.76
VARS-217ENST00000440048 SLC25A30Q5SVS4 291 aa19.78■□□□□ 0.76
VARS-217ENST00000440048 C1orf229Q6ZS94 237 aaPredicted RBP19.78■□□□□ 0.76
VARS-217ENST00000440048 C11orf53Q8IXP5 236 aa19.78■□□□□ 0.76
VARS-217ENST00000440048 BOLLQ8N9W6 283 aaKnown RBP19.78■□□□□ 0.76
VARS-217ENST00000440048 OR1M1Q8NGA1 313 aa19.78■□□□□ 0.76
VARS-217ENST00000440048 OR10H4Q8NGA5 316 aa19.78■□□□□ 0.76
VARS-217ENST00000440048 OR51E1Q8TCB6 317 aa19.78■□□□□ 0.76
VARS-217ENST00000440048 PIGCQ92535 297 aa19.78■□□□□ 0.76
VARS-217ENST00000440048 ITPKCQ96DU7 683 aa19.78■□□□□ 0.76
VARS-217ENST00000440048 MICU1Q9BPX6 476 aa19.78■□□□□ 0.76
VARS-217ENST00000440048 GPR84Q9NQS5 396 aa19.78■□□□□ 0.76
VARS-217ENST00000440048 MIOXQ9UGB7 285 aa19.78■□□□□ 0.76
VARS-217ENST00000440048 POLR3KQ9Y2Y1 108 aaPredicted RBP19.78■□□□□ 0.76
VARS-217ENST00000440048 GMPPBQ9Y5P6 360 aa19.78■□□□□ 0.76
VARS-217ENST00000440048 R4GMQ9 66 aa19.78■□□□□ 0.76
VARS-217ENST00000440048 PPIAL4CA0A0B4J2A2 164 aa19.77■□□□□ 0.76
VARS-217ENST00000440048 ANXA2P2A6NMY6 339 aa19.77■□□□□ 0.76
VARS-217ENST00000440048 A8MXK9 166 aa19.77■□□□□ 0.76
VARS-217ENST00000440048 J3QLI3 93 aa19.77■□□□□ 0.76
VARS-217ENST00000440048 PHF1O43189 567 aaPredicted RBP19.77■□□□□ 0.76
VARS-217ENST00000440048 TTRP02766 147 aa19.77■□□□□ 0.76
VARS-217ENST00000440048 GATA3P23771 443 aa19.77■□□□□ 0.76
VARS-217ENST00000440048 CPT2P23786 658 aa19.77■□□□□ 0.76
VARS-217ENST00000440048 CD80P33681 288 aa19.77■□□□□ 0.76
VARS-217ENST00000440048 IL5RAQ01344 420 aa19.77■□□□□ 0.76
VARS-217ENST00000440048 OCLNQ16625 522 aa19.77■□□□□ 0.76
VARS-217ENST00000440048 COMMD2Q86X83 199 aa19.77■□□□□ 0.76
VARS-217ENST00000440048 GALNT4Q8N4A0 578 aa19.77■□□□□ 0.76
VARS-217ENST00000440048 FAM71F1Q96KD3 344 aaPredicted RBP19.77■□□□□ 0.76
VARS-217ENST00000440048 MOB1AQ9H8S9 216 aa19.77■□□□□ 0.76
VARS-217ENST00000440048 ABCB9Q9NP78 766 aa19.77■□□□□ 0.76
VARS-217ENST00000440048 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP19.77■□□□□ 0.76
VARS-217ENST00000440048 GTF2A1LQ9UNN4 478 aa19.77■□□□□ 0.76
VARS-217ENST00000440048 LRCH1Q9Y2L9 728 aa19.77■□□□□ 0.76
VARS-217ENST00000440048 DNHD1Q96M86 4753 aa19.77■□□□□ 0.75
VARS-217ENST00000440048 hCG_1807616A0A1W2PRN6 198 aa19.76■□□□□ 0.75
VARS-217ENST00000440048 TRAPPC2LH3BP13 241 aa19.76■□□□□ 0.75
VARS-217ENST00000440048 LGALS8O00214 317 aa19.76■□□□□ 0.75
VARS-217ENST00000440048 KRT8P05787 483 aa19.76■□□□□ 0.75
VARS-217ENST00000440048 MTNR1AP48039 350 aa19.76■□□□□ 0.75
VARS-217ENST00000440048 CSNK2BP67870 215 aa19.76■□□□□ 0.75
VARS-217ENST00000440048 ZNF154Q13106 437 aa19.76■□□□□ 0.75
VARS-217ENST00000440048 ZNF684Q5T5D7 378 aa19.76■□□□□ 0.75
VARS-217ENST00000440048 MEDAGQ5VYS4 303 aa19.76■□□□□ 0.75
VARS-217ENST00000440048 SFRP4Q6FHJ7 346 aaPredicted RBP19.76■□□□□ 0.75
VARS-217ENST00000440048 LYPD2Q6UXB3 125 aa19.76■□□□□ 0.75
VARS-217ENST00000440048 DCDC5Q6ZRR9 648 aa19.76■□□□□ 0.75
VARS-217ENST00000440048 GCSAMQ8N6F7 178 aa19.76■□□□□ 0.75
VARS-217ENST00000440048 YIPF7Q8N8F6 280 aa19.76■□□□□ 0.75
VARS-217ENST00000440048 TMEM158Q8WZ71 300 aa19.76■□□□□ 0.75
VARS-217ENST00000440048 OR5P3Q8WZ94 311 aa19.76■□□□□ 0.75
VARS-217ENST00000440048 ITFG2Q969R8 447 aa19.76■□□□□ 0.75
VARS-217ENST00000440048 NEIL1Q96FI4 390 aaPredicted RBP19.76■□□□□ 0.75
VARS-217ENST00000440048 RTL8AQ9BWD3 113 aa19.76■□□□□ 0.75
VARS-217ENST00000440048 METTL17Q9H7H0 456 aaPredicted RBP19.76■□□□□ 0.75
VARS-217ENST00000440048 MMP26Q9NRE1 261 aa19.76■□□□□ 0.75
VARS-217ENST00000440048 AASSQ9UDR5 926 aa19.76■□□□□ 0.75
VARS-217ENST00000440048 OR52A1Q9UKL2 312 aa19.76■□□□□ 0.75
VARS-217ENST00000440048 LOC105371242A0A075B767 164 aa19.75■□□□□ 0.75
VARS-217ENST00000440048 ZNF816-ZNF321PA0A0X1KG74 233 aa19.75■□□□□ 0.75
VARS-217ENST00000440048 C3orf80F5H4A9 247 aa19.75■□□□□ 0.75
VARS-217ENST00000440048 LHBP01229 141 aa19.75■□□□□ 0.75
VARS-217ENST00000440048 ATP6V1B1P15313 513 aa19.75■□□□□ 0.75
VARS-217ENST00000440048 ZSCAN26Q16670 478 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms