RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 SUMO3P55854 103 aaPredicted RBP11.93□□□□□ -0.5
HERPUD1-204ENST00000439977 GPR85P60893 370 aa11.93□□□□□ -0.5
HERPUD1-204ENST00000439977 KISS1Q15726 138 aa11.93□□□□□ -0.5
HERPUD1-204ENST00000439977 ANKRD55Q3KP44 614 aa11.93□□□□□ -0.5
HERPUD1-204ENST00000439977 GTPBP8Q8N3Z3 284 aaPredicted RBP11.93□□□□□ -0.5
HERPUD1-204ENST00000439977 EIF4E3Q8N5X7 224 aaKnown RBP11.93□□□□□ -0.5
HERPUD1-204ENST00000439977 OR6S1Q8NH40 331 aa11.93□□□□□ -0.5
HERPUD1-204ENST00000439977 ASB13Q8WXK3 278 aa11.93□□□□□ -0.5
HERPUD1-204ENST00000439977 OR10C1Q96KK4 312 aa11.93□□□□□ -0.5
HERPUD1-204ENST00000439977 ZNF385AQ96PM9 386 aaKnown RBP11.93□□□□□ -0.5
HERPUD1-204ENST00000439977 ZNF701Q9NV72 531 aaPredicted RBP11.93□□□□□ -0.5
HERPUD1-204ENST00000439977 OCIAD1Q9NX40 245 aa11.93□□□□□ -0.5
HERPUD1-204ENST00000439977 SLC39A1Q9NY26 324 aa11.93□□□□□ -0.5
HERPUD1-204ENST00000439977 TRIOBPQ9H2D6 2365 aa11.93□□□□□ -0.5
HERPUD1-204ENST00000439977 IGLV3-12A0A075B6K2 115 aa11.93□□□□□ -0.5
HERPUD1-204ENST00000439977 DNASE2O00115 360 aaPredicted RBP11.93□□□□□ -0.5
HERPUD1-204ENST00000439977 BLVRBP30043 206 aaPredicted RBP11.93□□□□□ -0.5
HERPUD1-204ENST00000439977 SNU13P55769 128 aaKnown RBP11.93□□□□□ -0.5
HERPUD1-204ENST00000439977 CSNK2A1P68400 391 aaPredicted RBP11.93□□□□□ -0.5
HERPUD1-204ENST00000439977 TMEM128Q5BJH2 165 aa11.93□□□□□ -0.5
HERPUD1-204ENST00000439977 SLC25A47Q6Q0C1 308 aa11.93□□□□□ -0.5
HERPUD1-204ENST00000439977 RABEPKQ7Z6M1 372 aa11.93□□□□□ -0.5
HERPUD1-204ENST00000439977 CSNK2A3Q8NEV1 391 aa11.93□□□□□ -0.5
HERPUD1-204ENST00000439977 OR5H2Q8NGV7 314 aa11.93□□□□□ -0.5
HERPUD1-204ENST00000439977 ZNF837Q96EG3 531 aaPredicted RBP11.93□□□□□ -0.5
HERPUD1-204ENST00000439977 LYZL4Q96KX0 146 aa11.93□□□□□ -0.5
HERPUD1-204ENST00000439977 HDHD3Q9BSH5 251 aaPredicted RBP11.93□□□□□ -0.5
HERPUD1-204ENST00000439977 RBM24Q9BX46 236 aaKnown RBP11.93□□□□□ -0.5
HERPUD1-204ENST00000439977 FAM117AQ9C073 453 aa11.93□□□□□ -0.5
HERPUD1-204ENST00000439977 SEMA5BQ9P283 1151 aa11.93□□□□□ -0.5
HERPUD1-204ENST00000439977 IGHV5-10-1A0A0J9YXX1 117 aa11.93□□□□□ -0.5
HERPUD1-204ENST00000439977 CHRM2P08172 466 aa11.93□□□□□ -0.5
HERPUD1-204ENST00000439977 SRSF4Q08170 494 aaKnown RBP11.93□□□□□ -0.5
HERPUD1-204ENST00000439977 ZNF169Q14929 603 aaPredicted RBP11.93□□□□□ -0.5
HERPUD1-204ENST00000439977 DRAM2Q6UX65 266 aa11.93□□□□□ -0.5
HERPUD1-204ENST00000439977 PGAP1Q75T13 922 aa11.93□□□□□ -0.5
HERPUD1-204ENST00000439977 KMT5CQ86Y97 462 aa11.93□□□□□ -0.5
HERPUD1-204ENST00000439977 OR13G1Q8NGZ3 307 aa11.93□□□□□ -0.5
HERPUD1-204ENST00000439977 PIK3IP1Q96FE7 263 aa11.93□□□□□ -0.5
HERPUD1-204ENST00000439977 ZNF160Q9HCG1 818 aa11.93□□□□□ -0.5
HERPUD1-204ENST00000439977 EHFQ9NZC4 300 aa11.93□□□□□ -0.5
HERPUD1-204ENST00000439977 GPR132Q9UNW8 380 aa11.93□□□□□ -0.5
HERPUD1-204ENST00000439977 NPIPB13A6NJU9 1138 aa11.92□□□□□ -0.5
HERPUD1-204ENST00000439977 NPIPB4C9JG80 1138 aa11.92□□□□□ -0.5
HERPUD1-204ENST00000439977 SFTPBP07988 381 aa11.92□□□□□ -0.5
HERPUD1-204ENST00000439977 HLA-GP17693 338 aa11.92□□□□□ -0.5
HERPUD1-204ENST00000439977 GABRR1P24046 479 aa11.92□□□□□ -0.5
HERPUD1-204ENST00000439977 S100A10P60903 97 aa11.92□□□□□ -0.5
HERPUD1-204ENST00000439977 SUPT4H1P63272 117 aaKnown RBP11.92□□□□□ -0.5
HERPUD1-204ENST00000439977 ACY1Q03154 408 aa11.92□□□□□ -0.5
HERPUD1-204ENST00000439977 CHAF1BQ13112 559 aa11.92□□□□□ -0.5
HERPUD1-204ENST00000439977 AIMP2Q13155 320 aaKnown RBP11.92□□□□□ -0.5
HERPUD1-204ENST00000439977 UBE2V2Q15819 145 aa11.92□□□□□ -0.5
HERPUD1-204ENST00000439977 GUCA2BQ16661 112 aa11.92□□□□□ -0.5
HERPUD1-204ENST00000439977 NKAPLQ5M9Q1 402 aa11.92□□□□□ -0.5
HERPUD1-204ENST00000439977 CARFQ8N187 725 aa11.92□□□□□ -0.5
HERPUD1-204ENST00000439977 MARC2Q969Z3 335 aa11.92□□□□□ -0.5
HERPUD1-204ENST00000439977 SPACA9Q96E40 222 aaPredicted RBP11.92□□□□□ -0.5
HERPUD1-204ENST00000439977 OR10A2Q9H208 303 aa11.92□□□□□ -0.5
HERPUD1-204ENST00000439977 ZNF581Q9P0T4 197 aa11.92□□□□□ -0.5
HERPUD1-204ENST00000439977 MYO7BQ6PIF6 2116 aa11.92□□□□□ -0.5
HERPUD1-204ENST00000439977 IGKV1D-8A0A087WSZ0 117 aa11.92□□□□□ -0.5
HERPUD1-204ENST00000439977 DBX1A6NMT0 343 aa11.92□□□□□ -0.5
HERPUD1-204ENST00000439977 ACTL6AO96019 429 aa11.92□□□□□ -0.5
HERPUD1-204ENST00000439977 FCGR2AP12318 317 aa11.92□□□□□ -0.5
HERPUD1-204ENST00000439977 PNLIPP16233 465 aa11.92□□□□□ -0.5
HERPUD1-204ENST00000439977 PLEKHN1Q494U1 663 aaPredicted RBP11.92□□□□□ -0.5
HERPUD1-204ENST00000439977 C6orf201Q7Z4U5 140 aa11.92□□□□□ -0.5
HERPUD1-204ENST00000439977 TMEM17Q86X19 198 aa11.92□□□□□ -0.5
HERPUD1-204ENST00000439977 OR6X1Q8NH79 312 aa11.92□□□□□ -0.5
HERPUD1-204ENST00000439977 CCDC74BQ96LY2 380 aa11.92□□□□□ -0.5
HERPUD1-204ENST00000439977 OXGR1Q96P68 337 aa11.92□□□□□ -0.5
HERPUD1-204ENST00000439977 TSNAXQ99598 290 aaKnown RBP11.92□□□□□ -0.5
HERPUD1-204ENST00000439977 RTBDNQ9BSG5 229 aaPredicted RBP11.92□□□□□ -0.5
HERPUD1-204ENST00000439977 NCOA6Q14686 2063 aaPredicted RBP11.92□□□□□ -0.5
HERPUD1-204ENST00000439977 ARPC4-TTLL3A0A0A6YYG9 625 aa11.91□□□□□ -0.5
HERPUD1-204ENST00000439977 A0A1B0GW55 424 aa11.91□□□□□ -0.5
HERPUD1-204ENST00000439977 ABCD4O14678 606 aa11.91□□□□□ -0.5
HERPUD1-204ENST00000439977 DUX4L2P0CJ85 424 aa11.91□□□□□ -0.5
HERPUD1-204ENST00000439977 DUX4L3P0CJ86 424 aa11.91□□□□□ -0.5
HERPUD1-204ENST00000439977 DUX4L4P0CJ87 422 aa11.91□□□□□ -0.5
HERPUD1-204ENST00000439977 DUX4L5P0CJ88 424 aa11.91□□□□□ -0.5
HERPUD1-204ENST00000439977 DUX4L6P0CJ89 424 aa11.91□□□□□ -0.5
HERPUD1-204ENST00000439977 DUX4L7P0CJ90 424 aa11.91□□□□□ -0.5
HERPUD1-204ENST00000439977 GLI4P10075 376 aa11.91□□□□□ -0.5
HERPUD1-204ENST00000439977 CTRB1P17538 263 aa11.91□□□□□ -0.5
HERPUD1-204ENST00000439977 GUCA1AP43080 201 aaPredicted RBP11.91□□□□□ -0.5
HERPUD1-204ENST00000439977 PTGFRP43088 359 aa11.91□□□□□ -0.5
HERPUD1-204ENST00000439977 RAET1LQ5VY80 246 aa11.91□□□□□ -0.5
HERPUD1-204ENST00000439977 CTRB2Q6GPI1 263 aa11.91□□□□□ -0.5
HERPUD1-204ENST00000439977 ZNF585AQ6P3V2 769 aa11.91□□□□□ -0.5
HERPUD1-204ENST00000439977 BRICD5Q6PL45 260 aa11.91□□□□□ -0.5
HERPUD1-204ENST00000439977 PNLDC1Q8NA58 520 aaKnown RBP11.91□□□□□ -0.5
HERPUD1-204ENST00000439977 OR14K1Q8NGZ2 314 aa11.91□□□□□ -0.5
HERPUD1-204ENST00000439977 CPNE2Q96FN4 548 aaPredicted RBP11.91□□□□□ -0.5
HERPUD1-204ENST00000439977 DUX4Q9UBX2 424 aa11.91□□□□□ -0.5
HERPUD1-204ENST00000439977 SIGLEC6O43699 453 aa11.91□□□□□ -0.5
HERPUD1-204ENST00000439977 RAB32Q13637 225 aa11.91□□□□□ -0.5
HERPUD1-204ENST00000439977 AADACL3Q5VUY0 350 aa11.91□□□□□ -0.5
HERPUD1-204ENST00000439977 OR2AE1Q8NHA4 323 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms