RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 METTL11BQ5VVY1 283 aa10.26□□□□□ -0.77
SMAD3-202ENST00000439724 TMEM42Q69YG0 159 aa10.26□□□□□ -0.77
SMAD3-202ENST00000439724 ZNF782Q6ZMW2 699 aaPredicted RBP10.26□□□□□ -0.77
SMAD3-202ENST00000439724 OR11H7Q8NGC8 314 aa10.26□□□□□ -0.77
SMAD3-202ENST00000439724 OR4D10Q8NGI6 311 aa10.26□□□□□ -0.77
SMAD3-202ENST00000439724 SPSB1Q96BD6 273 aa10.26□□□□□ -0.77
SMAD3-202ENST00000439724 MED30Q96HR3 178 aa10.26□□□□□ -0.77
SMAD3-202ENST00000439724 LRFN3Q9BTN0 628 aa10.26□□□□□ -0.77
SMAD3-202ENST00000439724 TMEM59Q9BXS4 323 aa10.26□□□□□ -0.77
SMAD3-202ENST00000439724 CST11Q9H112 138 aa10.26□□□□□ -0.77
SMAD3-202ENST00000439724 UPB1Q9UBR1 384 aa10.26□□□□□ -0.77
SMAD3-202ENST00000439724 KLK13Q9UKR3 277 aa10.26□□□□□ -0.77
SMAD3-202ENST00000439724 EP300Q09472 2414 aaPredicted RBP10.26□□□□□ -0.77
SMAD3-202ENST00000439724 WDFY4Q6ZS81 3184 aa10.25□□□□□ -0.77
SMAD3-202ENST00000439724 TRAV17A0A0B4J275 112 aa10.25□□□□□ -0.77
SMAD3-202ENST00000439724 hCG_38984A0A1B0GV85 526 aa10.25□□□□□ -0.77
SMAD3-202ENST00000439724 SLC22A20A6NK97 555 aa10.25□□□□□ -0.77
SMAD3-202ENST00000439724 MPIG6BO95866 241 aa10.25□□□□□ -0.77
SMAD3-202ENST00000439724 CYB5AP00167 134 aa10.25□□□□□ -0.77
SMAD3-202ENST00000439724 GSTP1P09211 210 aaKnown RBP10.25□□□□□ -0.77
SMAD3-202ENST00000439724 SULT1A3P0DMM9 295 aa10.25□□□□□ -0.77
SMAD3-202ENST00000439724 SULT1A4P0DMN0 295 aa10.25□□□□□ -0.77
SMAD3-202ENST00000439724 ZNF24P17028 368 aa10.25□□□□□ -0.77
SMAD3-202ENST00000439724 ERP29P30040 261 aaKnown RBP10.25□□□□□ -0.77
SMAD3-202ENST00000439724 PTGFRP43088 359 aa10.25□□□□□ -0.77
SMAD3-202ENST00000439724 GZMKP49863 264 aa10.25□□□□□ -0.77
SMAD3-202ENST00000439724 MRPS15P82914 257 aaKnown RBP10.25□□□□□ -0.77
SMAD3-202ENST00000439724 PMP22Q01453 160 aa10.25□□□□□ -0.77
SMAD3-202ENST00000439724 RIPPLY1Q0D2K3 151 aa10.25□□□□□ -0.77
SMAD3-202ENST00000439724 TNK1Q13470 666 aa10.25□□□□□ -0.77
SMAD3-202ENST00000439724 CNN3Q15417 329 aaKnown RBP10.25□□□□□ -0.77
SMAD3-202ENST00000439724 CDNFQ49AH0 187 aa10.25□□□□□ -0.77
SMAD3-202ENST00000439724 GLDNQ6ZMI3 551 aaPredicted RBP10.25□□□□□ -0.77
SMAD3-202ENST00000439724 COLCA1Q6ZS62 124 aa10.25□□□□□ -0.77
SMAD3-202ENST00000439724 NUFIP2Q7Z417 695 aaKnown RBP10.25□□□□□ -0.77
SMAD3-202ENST00000439724 FJX1Q86VR8 437 aa10.25□□□□□ -0.77
SMAD3-202ENST00000439724 PIAS4Q8N2W9 510 aaPredicted RBP10.25□□□□□ -0.77
SMAD3-202ENST00000439724 CHST4Q8NCG5 386 aa10.25□□□□□ -0.77
SMAD3-202ENST00000439724 TMEM104Q8NE00 496 aa10.25□□□□□ -0.77
SMAD3-202ENST00000439724 CPEB3Q8NE35 698 aaKnown RBP10.25□□□□□ -0.77
SMAD3-202ENST00000439724 OR2AE1Q8NHA4 323 aa10.25□□□□□ -0.77
SMAD3-202ENST00000439724 SPSB4Q96A44 273 aa10.25□□□□□ -0.77
SMAD3-202ENST00000439724 CMBLQ96DG6 245 aa10.25□□□□□ -0.77
SMAD3-202ENST00000439724 CPNE2Q96FN4 548 aaPredicted RBP10.25□□□□□ -0.77
SMAD3-202ENST00000439724 NICN1Q9BSH3 213 aa10.25□□□□□ -0.77
SMAD3-202ENST00000439724 URM1Q9BTM9 101 aaKnown RBP10.25□□□□□ -0.77
SMAD3-202ENST00000439724 C1QTNF5Q9BXJ0 243 aa10.25□□□□□ -0.77
SMAD3-202ENST00000439724 ZMAT3Q9HA38 289 aaKnown RBP10.25□□□□□ -0.77
SMAD3-202ENST00000439724 NPDC1Q9NQX5 325 aaPredicted RBP10.25□□□□□ -0.77
SMAD3-202ENST00000439724 B3GNT2Q9NY97 397 aa10.25□□□□□ -0.77
SMAD3-202ENST00000439724 DLL3Q9NYJ7 618 aa10.25□□□□□ -0.77
SMAD3-202ENST00000439724 A0A0A6YYD4 124 aa10.24□□□□□ -0.77
SMAD3-202ENST00000439724 SNRPGP15A8MWD9 76 aa10.24□□□□□ -0.77
SMAD3-202ENST00000439724 ZNF736B4DX44 427 aaPredicted RBP10.24□□□□□ -0.77
SMAD3-202ENST00000439724 RAB3DO95716 219 aa10.24□□□□□ -0.77
SMAD3-202ENST00000439724 HPXP02790 462 aa10.24□□□□□ -0.77
SMAD3-202ENST00000439724 ANXA3P12429 323 aa10.24□□□□□ -0.77
SMAD3-202ENST00000439724 SDHBP21912 280 aa10.24□□□□□ -0.77
SMAD3-202ENST00000439724 PRKACBP22694 351 aa10.24□□□□□ -0.77
SMAD3-202ENST00000439724 AGTR1P30556 359 aa10.24□□□□□ -0.77
SMAD3-202ENST00000439724 FOXG1P55316 489 aaPredicted RBP10.24□□□□□ -0.77
SMAD3-202ENST00000439724 RPS27AP62979 156 aaKnown RBP10.24□□□□□ -0.77
SMAD3-202ENST00000439724 OR8B8Q15620 311 aa10.24□□□□□ -0.77
SMAD3-202ENST00000439724 RSPO4Q2I0M5 234 aaPredicted RBP10.24□□□□□ -0.77
SMAD3-202ENST00000439724 ZBTB37Q5TC79 503 aa10.24□□□□□ -0.77
SMAD3-202ENST00000439724 SEZ6L2Q6UXD5 910 aa10.24□□□□□ -0.77
SMAD3-202ENST00000439724 DPPA2Q7Z7J5 298 aa10.24□□□□□ -0.77
SMAD3-202ENST00000439724 ZNF584Q8IVC4 421 aa10.24□□□□□ -0.77
SMAD3-202ENST00000439724 FAM89BQ8N5H3 189 aa10.24□□□□□ -0.77
SMAD3-202ENST00000439724 BEST4Q8NFU0 473 aa10.24□□□□□ -0.77
SMAD3-202ENST00000439724 OR56B1Q8NGI3 324 aa10.24□□□□□ -0.77
SMAD3-202ENST00000439724 OR51S1Q8NGJ8 323 aa10.24□□□□□ -0.77
SMAD3-202ENST00000439724 NPRL2Q8WTW4 380 aa10.24□□□□□ -0.77
SMAD3-202ENST00000439724 DVL3Q92997 716 aaPredicted RBP10.24□□□□□ -0.77
SMAD3-202ENST00000439724 DACT3Q96B18 629 aaPredicted RBP10.24□□□□□ -0.77
SMAD3-202ENST00000439724 GINS4Q9BRT9 223 aa10.24□□□□□ -0.77
SMAD3-202ENST00000439724 SELENOIQ9C0D9 397 aa10.24□□□□□ -0.77
SMAD3-202ENST00000439724 GPN1Q9HCN4 374 aaPredicted RBP10.24□□□□□ -0.77
SMAD3-202ENST00000439724 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.24□□□□□ -0.777e-8■■■■□ 19.9
SMAD3-202ENST00000439724 ELF5Q9UKW6 265 aaPredicted RBP10.24□□□□□ -0.77
SMAD3-202ENST00000439724 FREM1Q5H8C1 2179 aa10.24□□□□□ -0.77
SMAD3-202ENST00000439724 PYCARD-AS1I3L0S3 204 aa10.23□□□□□ -0.77
SMAD3-202ENST00000439724 CRTAPO75718 401 aaPredicted RBP10.23□□□□□ -0.77
SMAD3-202ENST00000439724 ZNF735P0CB33 412 aa10.23□□□□□ -0.77
SMAD3-202ENST00000439724 EDN3P14138 238 aa10.23□□□□□ -0.77
SMAD3-202ENST00000439724 HIST1H1DP16402 221 aaKnown RBP10.23□□□□□ -0.77
SMAD3-202ENST00000439724 MPZP25189 248 aa10.23□□□□□ -0.77
SMAD3-202ENST00000439724 ARR3P36575 388 aa10.23□□□□□ -0.77
SMAD3-202ENST00000439724 RAD52P43351 418 aa10.23□□□□□ -0.77
SMAD3-202ENST00000439724 ZP1P60852 638 aa10.23□□□□□ -0.77
SMAD3-202ENST00000439724 FAM3AP98173 230 aa10.23□□□□□ -0.77
SMAD3-202ENST00000439724 FAPQ12884 760 aa10.23□□□□□ -0.77
SMAD3-202ENST00000439724 MEF2DQ14814 521 aa10.23□□□□□ -0.77
SMAD3-202ENST00000439724 ZMYND11Q15326 602 aa10.23□□□□□ -0.77
SMAD3-202ENST00000439724 PNLIPRP3Q17RR3 467 aa10.23□□□□□ -0.77
SMAD3-202ENST00000439724 DEFB109BQ30KR1 87 aa10.23□□□□□ -0.77
SMAD3-202ENST00000439724 SLC22A6Q4U2R8 563 aa10.23□□□□□ -0.77
SMAD3-202ENST00000439724 CLVS2Q5SYC1 327 aa10.23□□□□□ -0.77
SMAD3-202ENST00000439724 C9orf135Q5VTT2 229 aa10.23□□□□□ -0.77
SMAD3-202ENST00000439724 SLC36A1Q7Z2H8 476 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms