RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 SLC26A10Q8NG04 563 aa8.05□□□□□ -1.12
COPB1-202ENST00000439561 RNASE11Q8TAA1 199 aaKnown RBP8.05□□□□□ -1.12
COPB1-202ENST00000439561 RPS4Y2Q8TD47 263 aa8.05□□□□□ -1.12
COPB1-202ENST00000439561 SP7Q8TDD2 431 aaPredicted RBP8.05□□□□□ -1.12
COPB1-202ENST00000439561 ADAMTS18Q8TE60 1221 aa8.05□□□□□ -1.12
COPB1-202ENST00000439561 AQP3Q92482 292 aa8.05□□□□□ -1.12
COPB1-202ENST00000439561 SGK3Q96BR1 496 aa8.05□□□□□ -1.12
COPB1-202ENST00000439561 FAM86C1Q9NVL1 165 aa8.05□□□□□ -1.12
COPB1-202ENST00000439561 NXT1Q9UKK6 140 aaKnown RBP8.05□□□□□ -1.12
COPB1-202ENST00000439561 TCRBV21S2A2A0A5A6 115 aa8.05□□□□□ -1.12
COPB1-202ENST00000439561 HSPB2A8KAH6 182 aa8.05□□□□□ -1.12
COPB1-202ENST00000439561 AP4M1O00189 453 aa8.05□□□□□ -1.12
COPB1-202ENST00000439561 GPR37O15354 613 aa8.05□□□□□ -1.12
COPB1-202ENST00000439561 CLN5O75503 358 aa8.05□□□□□ -1.12
COPB1-202ENST00000439561 BPNT1O95861 308 aa8.05□□□□□ -1.12
COPB1-202ENST00000439561 CHRM2P08172 466 aa8.05□□□□□ -1.12
COPB1-202ENST00000439561 HIST1H1DP16402 221 aaKnown RBP8.05□□□□□ -1.12
COPB1-202ENST00000439561 TAGLN2P37802 199 aaKnown RBP8.05□□□□□ -1.12
COPB1-202ENST00000439561 PRSS12P56730 875 aa8.05□□□□□ -1.12
COPB1-202ENST00000439561 RAP1AP62834 184 aa8.05□□□□□ -1.12
COPB1-202ENST00000439561 NKX6-1P78426 367 aaPredicted RBP8.05□□□□□ -1.12
COPB1-202ENST00000439561 NAAAQ02083 359 aa8.05□□□□□ -1.12
COPB1-202ENST00000439561 HSPB2Q16082 182 aa8.05□□□□□ -1.12
COPB1-202ENST00000439561 TSPO2Q5TGU0 170 aa8.05□□□□□ -1.12
COPB1-202ENST00000439561 DTWD2Q8NBA8 298 aa8.05□□□□□ -1.12
COPB1-202ENST00000439561 OR5L1Q8NGL2 311 aa8.05□□□□□ -1.12
COPB1-202ENST00000439561 OR10D4PQ8NGN7 298 aa8.05□□□□□ -1.12
COPB1-202ENST00000439561 ADAMTS17Q8TE56 1095 aa8.05□□□□□ -1.12
COPB1-202ENST00000439561 C11orf40Q8WZ69 217 aa8.05□□□□□ -1.12
COPB1-202ENST00000439561 BADQ92934 168 aa8.05□□□□□ -1.12
COPB1-202ENST00000439561 CYYR1Q96J86 154 aa8.05□□□□□ -1.12
COPB1-202ENST00000439561 RHOVQ96L33 236 aa8.05□□□□□ -1.12
COPB1-202ENST00000439561 RTN4RQ9BZR6 473 aa8.05□□□□□ -1.12
COPB1-202ENST00000439561 PRO1933Q9H354 126 aa8.05□□□□□ -1.12
COPB1-202ENST00000439561 KLF2Q9Y5W3 355 aaPredicted RBP8.05□□□□□ -1.12
COPB1-202ENST00000439561 ZNF726A6NNF4 738 aa8.05□□□□□ -1.12
COPB1-202ENST00000439561 NPIPB9F8W1W9 429 aa8.05□□□□□ -1.12
COPB1-202ENST00000439561 K7EQS6 105 aa8.05□□□□□ -1.12
COPB1-202ENST00000439561 MFNGO00587 321 aa8.05□□□□□ -1.12
COPB1-202ENST00000439561 IL33O95760 270 aa8.05□□□□□ -1.12
COPB1-202ENST00000439561 COL9A1P20849 921 aa8.05□□□□□ -1.12
COPB1-202ENST00000439561 PARM1Q6UWI2 310 aa8.05□□□□□ -1.12
COPB1-202ENST00000439561 PLXDC2Q6UX71 529 aa8.05□□□□□ -1.12
COPB1-202ENST00000439561 FBXW12Q6X9E4 464 aa8.05□□□□□ -1.12
COPB1-202ENST00000439561 RNF144BQ7Z419 303 aa8.05□□□□□ -1.12
COPB1-202ENST00000439561 ZNF524Q96C55 264 aa8.05□□□□□ -1.12
COPB1-202ENST00000439561 PRRX2Q99811 253 aa8.05□□□□□ -1.12
COPB1-202ENST00000439561 SOX7Q9BT81 388 aa8.05□□□□□ -1.12
COPB1-202ENST00000439561 EDEM2Q9BV94 578 aa8.05□□□□□ -1.12
COPB1-202ENST00000439561 OR51M1Q9H341 326 aa8.05□□□□□ -1.12
COPB1-202ENST00000439561 NELFAQ9H3P2 528 aa8.05□□□□□ -1.12
COPB1-202ENST00000439561 CYP8B1Q9UNU6 501 aa8.05□□□□□ -1.12
COPB1-202ENST00000439561 RCL1Q9Y2P8 373 aaKnown RBP8.05□□□□□ -1.12
COPB1-202ENST00000439561 A0A1B0GTQ1 180 aa8.04□□□□□ -1.12
COPB1-202ENST00000439561 CCDC85CA6NKD9 419 aa8.04□□□□□ -1.12
COPB1-202ENST00000439561 EIF1BO60739 113 aaKnown RBP8.04□□□□□ -1.12
COPB1-202ENST00000439561 FCGR2AP12318 317 aa8.04□□□□□ -1.12
COPB1-202ENST00000439561 EIF1P41567 113 aaKnown RBP8.04□□□□□ -1.12
COPB1-202ENST00000439561 DAP3P51398 398 aaKnown RBP8.04□□□□□ -1.12
COPB1-202ENST00000439561 GFERP55789 205 aa8.04□□□□□ -1.12
COPB1-202ENST00000439561 TAS2R46P59540 309 aa8.04□□□□□ -1.12
COPB1-202ENST00000439561 VAMP2P63027 116 aa8.04□□□□□ -1.12
COPB1-202ENST00000439561 GNMTQ14749 295 aa8.04□□□□□ -1.12
COPB1-202ENST00000439561 OR2B11Q5JQS5 317 aa8.04□□□□□ -1.12
COPB1-202ENST00000439561 FAHD2BQ6P2I3 314 aaPredicted RBP8.04□□□□□ -1.12
COPB1-202ENST00000439561 ZNF600Q6ZNG1 722 aa8.04□□□□□ -1.12
COPB1-202ENST00000439561 HOGA1Q86XE5 327 aa8.04□□□□□ -1.12
COPB1-202ENST00000439561 ARRDC1Q8N5I2 433 aa8.04□□□□□ -1.12
COPB1-202ENST00000439561 TMEM217Q8N7C4 229 aa8.04□□□□□ -1.12
COPB1-202ENST00000439561 LMX1AQ8TE12 382 aa8.04□□□□□ -1.12
COPB1-202ENST00000439561 TMEM234Q8WY98 164 aa8.04□□□□□ -1.12
COPB1-202ENST00000439561 FAHD2AQ96GK7 314 aa8.04□□□□□ -1.12
COPB1-202ENST00000439561 SLC46A1Q96NT5 459 aa8.04□□□□□ -1.12
COPB1-202ENST00000439561 TMEM106CQ9BVX2 250 aa8.04□□□□□ -1.12
COPB1-202ENST00000439561 PAPOLGQ9BWT3 736 aaKnown RBP8.04□□□□□ -1.12
COPB1-202ENST00000439561 CYTL1Q9NRR1 136 aa8.04□□□□□ -1.12
COPB1-202ENST00000439561 GFOD1Q9NXC2 390 aa8.04□□□□□ -1.12
COPB1-202ENST00000439561 A6NIZ1 184 aa8.04□□□□□ -1.12
COPB1-202ENST00000439561 ZNF727A8MUV8 499 aa8.04□□□□□ -1.12
COPB1-202ENST00000439561 TAAR5O14804 337 aa8.04□□□□□ -1.12
COPB1-202ENST00000439561 FOXS1O43638 330 aa8.04□□□□□ -1.12
COPB1-202ENST00000439561 MT-ATP6P00846 226 aa8.04□□□□□ -1.12
COPB1-202ENST00000439561 IL2RAP01589 272 aa8.04□□□□□ -1.12
COPB1-202ENST00000439561 BGLAPP02818 100 aa8.04□□□□□ -1.12
COPB1-202ENST00000439561 HSD17B7P56937 341 aa8.04□□□□□ -1.12
COPB1-202ENST00000439561 RAP1BP61224 184 aa8.04□□□□□ -1.12
COPB1-202ENST00000439561 TOMM20Q15388 145 aa8.04□□□□□ -1.12
COPB1-202ENST00000439561 HMGN3Q15651 99 aa8.04□□□□□ -1.12
COPB1-202ENST00000439561 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.04□□□□□ -1.12
COPB1-202ENST00000439561 PHF19Q5T6S3 580 aa8.04□□□□□ -1.12
COPB1-202ENST00000439561 BRICD5Q6PL45 260 aa8.04□□□□□ -1.12
COPB1-202ENST00000439561 OPN5Q6U736 354 aa8.04□□□□□ -1.12
COPB1-202ENST00000439561 ZFP62Q8NB50 900 aaPredicted RBP8.04□□□□□ -1.12
COPB1-202ENST00000439561 OR1J1Q8NGS3 322 aa8.04□□□□□ -1.12
COPB1-202ENST00000439561 IL23AQ9NPF7 189 aa8.04□□□□□ -1.12
COPB1-202ENST00000439561 DNAH14Q0VDD8 3507 aa8.04□□□□□ -1.12
COPB1-202ENST00000439561 THSD7BQ9C0I4 1608 aa8.04□□□□□ -1.12
COPB1-202ENST00000439561 IGLV1-36A0A0B4J1U3 117 aa8.04□□□□□ -1.12
COPB1-202ENST00000439561 FAM230AA0A1W2PPH8 454 aa8.04□□□□□ -1.12
COPB1-202ENST00000439561 WISP1O95388 367 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms