RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 ZNF649Q9BS31 505 aa16.44■□□□□ 0.22
SEMA3B-206ENST00000439487 PAPOLGQ9BWT3 736 aaKnown RBP16.44■□□□□ 0.22
SEMA3B-206ENST00000439487 VCX3BQ9H321 246 aa16.44■□□□□ 0.22
SEMA3B-206ENST00000439487 ERVK13-1Q9NX77 482 aa16.44■□□□□ 0.22
SEMA3B-206ENST00000439487 WIPI2Q9Y4P8 454 aa16.44■□□□□ 0.22
SEMA3B-206ENST00000439487 HIVEP2P31629 2446 aa16.43■□□□□ 0.22
SEMA3B-206ENST00000439487 LOC100289279A0A1B0GTE1 492 aa16.43■□□□□ 0.22
SEMA3B-206ENST00000439487 A0A1B0GTI1 187 aa16.43■□□□□ 0.22
SEMA3B-206ENST00000439487 IL2RGP31785 369 aa16.43■□□□□ 0.22
SEMA3B-206ENST00000439487 GNALP38405 381 aa16.43■□□□□ 0.22
SEMA3B-206ENST00000439487 PMELP40967 661 aa16.43■□□□□ 0.22
SEMA3B-206ENST00000439487 CHN2P52757 468 aa16.43■□□□□ 0.22
SEMA3B-206ENST00000439487 KRTAP1-1Q07627 177 aa16.43■□□□□ 0.22
SEMA3B-206ENST00000439487 SLC3A1Q07837 685 aa16.43■□□□□ 0.22
SEMA3B-206ENST00000439487 WDR38Q5JTN6 314 aa16.43■□□□□ 0.22
SEMA3B-206ENST00000439487 THAP5Q7Z6K1 395 aa16.43■□□□□ 0.22
SEMA3B-206ENST00000439487 PRSS35Q8N3Z0 413 aa16.43■□□□□ 0.22
SEMA3B-206ENST00000439487 CELF2-AS1Q8N7Q2 184 aa16.43■□□□□ 0.22
SEMA3B-206ENST00000439487 SEMA6DQ8NFY4 1073 aa16.43■□□□□ 0.22
SEMA3B-206ENST00000439487 FBLIM1Q8WUP2 373 aa16.43■□□□□ 0.22
SEMA3B-206ENST00000439487 PIGCQ92535 297 aa16.43■□□□□ 0.22
SEMA3B-206ENST00000439487 C4orf36Q96KX1 117 aa16.43■□□□□ 0.22
SEMA3B-206ENST00000439487 ISG20L2Q9H9L3 353 aaKnown RBP16.43■□□□□ 0.22
SEMA3B-206ENST00000439487 INPP5EQ9NRR6 644 aa16.43■□□□□ 0.22
SEMA3B-206ENST00000439487 UFSP2Q9NUQ7 469 aa16.43■□□□□ 0.22
SEMA3B-206ENST00000439487 RRP15Q9Y3B9 282 aaKnown RBP16.43■□□□□ 0.22
SEMA3B-206ENST00000439487 DNHD1Q96M86 4753 aa16.43■□□□□ 0.22
SEMA3B-206ENST00000439487 NSD1Q96L73 2696 aaPredicted RBP16.42■□□□□ 0.22
SEMA3B-206ENST00000439487 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.42■□□□□ 0.22
SEMA3B-206ENST00000439487 ZNF850A8MQ14 1090 aa16.42■□□□□ 0.22
SEMA3B-206ENST00000439487 H3BSH0 61 aa16.42■□□□□ 0.22
SEMA3B-206ENST00000439487 CST4P01036 141 aa16.42■□□□□ 0.22
SEMA3B-206ENST00000439487 KIR3DL2P43630 455 aa16.42■□□□□ 0.22
SEMA3B-206ENST00000439487 ACTA2P62736 377 aa16.42■□□□□ 0.22
SEMA3B-206ENST00000439487 ACTG2P63267 376 aa16.42■□□□□ 0.22
SEMA3B-206ENST00000439487 PRDX4Q13162 271 aa16.42■□□□□ 0.22
SEMA3B-206ENST00000439487 MPPED2Q15777 294 aa16.42■□□□□ 0.22
SEMA3B-206ENST00000439487 SNCBQ16143 134 aa16.42■□□□□ 0.22
SEMA3B-206ENST00000439487 IZUMO2Q6UXV1 221 aa16.42■□□□□ 0.22
SEMA3B-206ENST00000439487 KLBQ86Z14 1044 aa16.42■□□□□ 0.22
SEMA3B-206ENST00000439487 SPERTQ8NA61 448 aa16.42■□□□□ 0.22
SEMA3B-206ENST00000439487 OR8S1Q8NH09 359 aa16.42■□□□□ 0.22
SEMA3B-206ENST00000439487 CLDND2Q8NHS1 167 aa16.42■□□□□ 0.22
SEMA3B-206ENST00000439487 GGHQ92820 318 aa16.42■□□□□ 0.22
SEMA3B-206ENST00000439487 RAB1CQ92928 201 aa16.42■□□□□ 0.22
SEMA3B-206ENST00000439487 PELI1Q96FA3 418 aa16.42■□□□□ 0.22
SEMA3B-206ENST00000439487 MRPL48Q96GC5 212 aaKnown RBP16.42■□□□□ 0.22
SEMA3B-206ENST00000439487 TIMD4Q96H15 378 aa16.42■□□□□ 0.22
SEMA3B-206ENST00000439487 NPTNQ9Y639 398 aa16.42■□□□□ 0.22
SEMA3B-206ENST00000439487 ANK3Q12955 4377 aaKnown RBP16.41■□□□□ 0.22
SEMA3B-206ENST00000439487 IRGMA1A4Y4 181 aa16.41■□□□□ 0.22
SEMA3B-206ENST00000439487 XPNPEP2O43895 674 aa16.41■□□□□ 0.22
SEMA3B-206ENST00000439487 DHRS3O75911 302 aa16.41■□□□□ 0.22
SEMA3B-206ENST00000439487 CYB5R3P00387 301 aaPredicted RBP16.41■□□□□ 0.22
SEMA3B-206ENST00000439487 GRPP07492 148 aa16.41■□□□□ 0.22
SEMA3B-206ENST00000439487 HTR1AP08908 422 aa16.41■□□□□ 0.22
SEMA3B-206ENST00000439487 LIMS3P0CW19 117 aa16.41■□□□□ 0.22
SEMA3B-206ENST00000439487 LIMS4P0CW20 117 aa16.41■□□□□ 0.22
SEMA3B-206ENST00000439487 IGHV4-31P0DP07 118 aa16.41■□□□□ 0.22
SEMA3B-206ENST00000439487 ATP6V1B1P15313 513 aa16.41■□□□□ 0.22
SEMA3B-206ENST00000439487 GATA4P43694 442 aa16.41■□□□□ 0.22
SEMA3B-206ENST00000439487 RIPPLY1Q0D2K3 151 aa16.41■□□□□ 0.22
SEMA3B-206ENST00000439487 PEG10Q86TG7 708 aaKnown RBP16.41■□□□□ 0.22
SEMA3B-206ENST00000439487 FTMTQ8N4E7 242 aa16.41■□□□□ 0.22
SEMA3B-206ENST00000439487 PLPP7Q8NBV4 271 aa16.41■□□□□ 0.22
SEMA3B-206ENST00000439487 OR2G2Q8NGZ5 317 aa16.41■□□□□ 0.22
SEMA3B-206ENST00000439487 MYCBPQ99417 103 aaPredicted RBP16.41■□□□□ 0.22
SEMA3B-206ENST00000439487 PIGLQ9Y2B2 252 aa16.41■□□□□ 0.22
SEMA3B-206ENST00000439487 MPC1Q9Y5U8 109 aa16.41■□□□□ 0.22
SEMA3B-206ENST00000439487 ZNF816-ZNF321PA0A0X1KG74 233 aa16.4■□□□□ 0.22
SEMA3B-206ENST00000439487 TMEM178BH3BS89 294 aa16.4■□□□□ 0.22
SEMA3B-206ENST00000439487 IFNL4K9M1U5 179 aa16.4■□□□□ 0.22
SEMA3B-206ENST00000439487 MTRF1O75570 445 aaKnown RBP16.4■□□□□ 0.22
SEMA3B-206ENST00000439487 HEXAP06865 529 aa16.4■□□□□ 0.22
SEMA3B-206ENST00000439487 FAHP16930 419 aa16.4■□□□□ 0.22
SEMA3B-206ENST00000439487 DCKP27707 260 aa16.4■□□□□ 0.22
SEMA3B-206ENST00000439487 ETV1P50549 477 aa16.4■□□□□ 0.22
SEMA3B-206ENST00000439487 NANOS3P60323 173 aaKnown RBP16.4■□□□□ 0.22
SEMA3B-206ENST00000439487 MZT1Q08AG7 82 aa16.4■□□□□ 0.22
SEMA3B-206ENST00000439487 DOK3Q7L591 496 aa16.4■□□□□ 0.22
SEMA3B-206ENST00000439487 SYS1Q8N2H4 156 aa16.4■□□□□ 0.22
SEMA3B-206ENST00000439487 BPIFB6Q8NFQ5 453 aa16.4■□□□□ 0.22
SEMA3B-206ENST00000439487 OR14K1Q8NGZ2 314 aa16.4■□□□□ 0.22
SEMA3B-206ENST00000439487 ERGIC1Q969X5 290 aa16.4■□□□□ 0.22
SEMA3B-206ENST00000439487 ITPKCQ96DU7 683 aa16.4■□□□□ 0.22
SEMA3B-206ENST00000439487 JAM3Q9BX67 310 aa16.4■□□□□ 0.22
SEMA3B-206ENST00000439487 C14orf119Q9NWQ9 140 aa16.4■□□□□ 0.22
SEMA3B-206ENST00000439487 V9GYS6 101 aa16.4■□□□□ 0.22
SEMA3B-206ENST00000439487 A0A1B0GVI7 797 aa16.39■□□□□ 0.21
SEMA3B-206ENST00000439487 ISPDA4D126 451 aa16.39■□□□□ 0.21
SEMA3B-206ENST00000439487 ANXA2P2A6NMY6 339 aa16.39■□□□□ 0.21
SEMA3B-206ENST00000439487 ZNF205O95201 554 aa16.39■□□□□ 0.21
SEMA3B-206ENST00000439487 PTBP3O95758 552 aaKnown RBP16.39■□□□□ 0.21
SEMA3B-206ENST00000439487 IGHV2-70P01814 119 aa16.39■□□□□ 0.21
SEMA3B-206ENST00000439487 CCL1P22362 96 aa16.39■□□□□ 0.21
SEMA3B-206ENST00000439487 FDX2Q6P4F2 183 aa16.39■□□□□ 0.21
SEMA3B-206ENST00000439487 KRT74Q7RTS7 529 aa16.39■□□□□ 0.21
SEMA3B-206ENST00000439487 WDR86Q86TI4 376 aa16.39■□□□□ 0.21
SEMA3B-206ENST00000439487 ZDHHC23Q8IYP9 409 aa16.39■□□□□ 0.21
SEMA3B-206ENST00000439487 RDH10Q8IZV5 341 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms