RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 DCTN5Q9BTE1 182 aa6.82□□□□□ -1.32
NIF3L1-208ENST00000436412 ADAT1Q9BUB4 502 aaKnown RBP6.82□□□□□ -1.32
NIF3L1-208ENST00000436412 CCDC28BQ9BUN5 200 aa6.82□□□□□ -1.32
NIF3L1-208ENST00000436412 CDCA4Q9BXL8 241 aa6.82□□□□□ -1.32
NIF3L1-208ENST00000436412 SYT4Q9H2B2 425 aa6.82□□□□□ -1.32
NIF3L1-208ENST00000436412 NMNAT1Q9HAN9 279 aaPredicted RBP6.82□□□□□ -1.32
NIF3L1-208ENST00000436412 RNPEPL1Q9HAU8 725 aa6.82□□□□□ -1.32
NIF3L1-208ENST00000436412 C14orf119Q9NWQ9 140 aa6.82□□□□□ -1.32
NIF3L1-208ENST00000436412 VSX1Q9NZR4 365 aaPredicted RBP6.82□□□□□ -1.32
NIF3L1-208ENST00000436412 MRPL15Q9P015 296 aaKnown RBP6.82□□□□□ -1.32
NIF3L1-208ENST00000436412 PRPF19Q9UMS4 504 aaKnown RBP6.82□□□□□ -1.32
NIF3L1-208ENST00000436412 LHFPL6Q9Y693 200 aa6.82□□□□□ -1.32
NIF3L1-208ENST00000436412 SACSQ9NZJ4 4579 aa6.82□□□□□ -1.32
NIF3L1-208ENST00000436412 DNAH7Q8WXX0 4024 aa6.81□□□□□ -1.32
NIF3L1-208ENST00000436412 RYR2Q92736 4967 aa6.81□□□□□ -1.32
NIF3L1-208ENST00000436412 A0A1W2PRD5 423 aa6.81□□□□□ -1.32
NIF3L1-208ENST00000436412 A0A1W2PRF3 423 aa6.81□□□□□ -1.32
NIF3L1-208ENST00000436412 A0A1W2PRM7 423 aa6.81□□□□□ -1.32
NIF3L1-208ENST00000436412 hCG_1807616A0A1W2PRN6 198 aa6.81□□□□□ -1.32
NIF3L1-208ENST00000436412 TMEM120BA0PK00 339 aa6.81□□□□□ -1.32
NIF3L1-208ENST00000436412 A6NLC8 198 aa6.81□□□□□ -1.32
NIF3L1-208ENST00000436412 E9PQ18 207 aa6.81□□□□□ -1.32
NIF3L1-208ENST00000436412 NDUFB3O43676 98 aa6.81□□□□□ -1.32
NIF3L1-208ENST00000436412 DUS4LO95620 317 aaKnown RBP6.81□□□□□ -1.32
NIF3L1-208ENST00000436412 PPP1R3DO95685 299 aa6.81□□□□□ -1.32
NIF3L1-208ENST00000436412 LCATP04180 440 aa6.81□□□□□ -1.32
NIF3L1-208ENST00000436412 CD28P10747 220 aa6.81□□□□□ -1.32
NIF3L1-208ENST00000436412 IGLL1P15814 213 aa6.81□□□□□ -1.32
NIF3L1-208ENST00000436412 ZNF26P17031 533 aaPredicted RBP6.81□□□□□ -1.32
NIF3L1-208ENST00000436412 CRABP1P29762 137 aa6.81□□□□□ -1.32
NIF3L1-208ENST00000436412 GRK5P34947 590 aa6.81□□□□□ -1.32
NIF3L1-208ENST00000436412 TGM4P49221 684 aa6.81□□□□□ -1.32
NIF3L1-208ENST00000436412 MECP2P51608 486 aaKnown RBP6.81□□□□□ -1.32
NIF3L1-208ENST00000436412 TPTEP56180 551 aa6.81□□□□□ -1.32
NIF3L1-208ENST00000436412 HOXA4Q00056 320 aaPredicted RBP6.81□□□□□ -1.32
NIF3L1-208ENST00000436412 BLMHQ13867 455 aa6.81□□□□□ -1.32
NIF3L1-208ENST00000436412 SELPLGQ14242 412 aa6.81□□□□□ -1.32
NIF3L1-208ENST00000436412 LY6EQ16553 131 aa6.81□□□□□ -1.32
NIF3L1-208ENST00000436412 ZBED5Q49AG3 693 aa6.81□□□□□ -1.32
NIF3L1-208ENST00000436412 LRRC10Q5BKY1 277 aa6.81□□□□□ -1.32
NIF3L1-208ENST00000436412 ATPAF1Q5TC12 328 aaPredicted RBP6.81□□□□□ -1.32
NIF3L1-208ENST00000436412 MRPL21Q7Z2W9 205 aaKnown RBP6.81□□□□□ -1.32
NIF3L1-208ENST00000436412 FAM122BQ7Z309 247 aa6.81□□□□□ -1.32
NIF3L1-208ENST00000436412 NRMQ8IXM6 262 aa6.81□□□□□ -1.32
NIF3L1-208ENST00000436412 MICU2Q8IYU8 434 aa6.81□□□□□ -1.32
NIF3L1-208ENST00000436412 LYG1Q8N1E2 194 aa6.81□□□□□ -1.32
NIF3L1-208ENST00000436412 Q8N2B8 174 aa6.81□□□□□ -1.32
NIF3L1-208ENST00000436412 OR5D13Q8NGL4 314 aa6.81□□□□□ -1.32
NIF3L1-208ENST00000436412 OR10A6Q8NH74 314 aa6.81□□□□□ -1.32
NIF3L1-208ENST00000436412 WIPF2Q8TF74 440 aaPredicted RBP6.81□□□□□ -1.32
NIF3L1-208ENST00000436412 TSPEARQ8WU66 669 aa6.81□□□□□ -1.32
NIF3L1-208ENST00000436412 PRRC1Q96M27 445 aa6.81□□□□□ -1.32
NIF3L1-208ENST00000436412 DNTTIP1Q9H147 329 aa6.81□□□□□ -1.32
NIF3L1-208ENST00000436412 RERGLQ9H628 205 aa6.81□□□□□ -1.32
NIF3L1-208ENST00000436412 SERTAD4Q9NUC0 356 aa6.81□□□□□ -1.32
NIF3L1-208ENST00000436412 RPS6KA6Q9UK32 745 aa6.81□□□□□ -1.32
NIF3L1-208ENST00000436412 NDUFAF1Q9Y375 327 aa6.81□□□□□ -1.32
NIF3L1-208ENST00000436412 ADAM18Q9Y3Q7 739 aa6.81□□□□□ -1.32
NIF3L1-208ENST00000436412 EPPK1P58107 5090 aaKnown RBP6.8□□□□□ -1.32
NIF3L1-208ENST00000436412 F5H5K5 113 aa6.8□□□□□ -1.32
NIF3L1-208ENST00000436412 C3orf84H3BNL1 204 aa6.8□□□□□ -1.32
NIF3L1-208ENST00000436412 ANGPT2O15123 496 aa6.8□□□□□ -1.32
NIF3L1-208ENST00000436412 SHOX2O60902 331 aaPredicted RBP6.8□□□□□ -1.32
NIF3L1-208ENST00000436412 GRPP07492 148 aa6.8□□□□□ -1.32
NIF3L1-208ENST00000436412 NHLRC4P0CG21 123 aaPredicted RBP6.8□□□□□ -1.32
NIF3L1-208ENST00000436412 TNFRSF1BP20333 461 aa6.8□□□□□ -1.32
NIF3L1-208ENST00000436412 MSX2P35548 267 aaPredicted RBP6.8□□□□□ -1.32
NIF3L1-208ENST00000436412 GGT2P36268 569 aa6.8□□□□□ -1.32
NIF3L1-208ENST00000436412 MDH1P40925 334 aaKnown RBP6.8□□□□□ -1.32
NIF3L1-208ENST00000436412 NAA10P41227 235 aaPredicted RBP6.8□□□□□ -1.32
NIF3L1-208ENST00000436412 OR1E2P47887 323 aa6.8□□□□□ -1.32
NIF3L1-208ENST00000436412 GSK3BP49841 420 aa6.8□□□□□ -1.32
NIF3L1-208ENST00000436412 GZMMP51124 257 aa6.8□□□□□ -1.32
NIF3L1-208ENST00000436412 SLC35A2P78381 396 aa6.8□□□□□ -1.32
NIF3L1-208ENST00000436412 TRAP1Q12931 704 aaKnown RBP6.8□□□□□ -1.32
NIF3L1-208ENST00000436412 KLRD1Q13241 179 aa6.8□□□□□ -1.32
NIF3L1-208ENST00000436412 KRR1Q13601 381 aaKnown RBP6.8□□□□□ -1.32
NIF3L1-208ENST00000436412 TMEM177Q53S58 311 aa6.8□□□□□ -1.32
NIF3L1-208ENST00000436412 WDR38Q5JTN6 314 aa6.8□□□□□ -1.32
NIF3L1-208ENST00000436412 DNM1P34Q6PK57 102 aa6.8□□□□□ -1.32
NIF3L1-208ENST00000436412 CCBE1Q6UXH8 406 aaPredicted RBP6.8□□□□□ -1.32
NIF3L1-208ENST00000436412 ZNF826PQ6ZT77 177 aa6.8□□□□□ -1.32
NIF3L1-208ENST00000436412 TMPRSS11FQ6ZWK6 438 aa6.8□□□□□ -1.32
NIF3L1-208ENST00000436412 TSEN54Q7Z6J9 526 aaKnown RBP6.8□□□□□ -1.32
NIF3L1-208ENST00000436412 OFCC1Q8IZS5 231 aa6.8□□□□□ -1.32
NIF3L1-208ENST00000436412 OR13C2Q8NGS9 318 aa6.8□□□□□ -1.32
NIF3L1-208ENST00000436412 OR14K1Q8NGZ2 314 aa6.8□□□□□ -1.32
NIF3L1-208ENST00000436412 C7orf26Q96N11 449 aa6.8□□□□□ -1.32
NIF3L1-208ENST00000436412 CCL13Q99616 98 aa6.8□□□□□ -1.32
NIF3L1-208ENST00000436412 PITX2Q99697 317 aa6.8□□□□□ -1.32
NIF3L1-208ENST00000436412 ATF6BQ99941 703 aa6.8□□□□□ -1.32
NIF3L1-208ENST00000436412 SH3GL1Q99961 368 aa6.8□□□□□ -1.32
NIF3L1-208ENST00000436412 CITED2Q99967 270 aaPredicted RBP6.8□□□□□ -1.32
NIF3L1-208ENST00000436412 GPR61Q9BZJ8 451 aa6.8□□□□□ -1.32
NIF3L1-208ENST00000436412 NUAK2Q9H093 628 aa6.8□□□□□ -1.32
NIF3L1-208ENST00000436412 NKIRAS1Q9NYS0 192 aa6.8□□□□□ -1.32
NIF3L1-208ENST00000436412 A4GNTQ9UNA3 340 aa6.8□□□□□ -1.32
NIF3L1-208ENST00000436412 DNAH1Q9P2D7 4330 aa6.8□□□□□ -1.32
NIF3L1-208ENST00000436412 IGHV3OR15-7A0A075B7D8 119 aa6.79□□□□□ -1.32
NIF3L1-208ENST00000436412 WI2-2373I1.2A0A1W2PRP0 233 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms