RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 ZNF345Q14585 488 aa16.34■□□□□ 0.21
CLK1-205ENST00000434813 VAX1Q5SQQ9 334 aa16.34■□□□□ 0.21
CLK1-205ENST00000434813 ZNF546Q86UE3 836 aa16.34■□□□□ 0.21
CLK1-205ENST00000434813 HOGA1Q86XE5 327 aa16.34■□□□□ 0.21
CLK1-205ENST00000434813 PNLDC1Q8NA58 520 aaKnown RBP16.34■□□□□ 0.21
CLK1-205ENST00000434813 PHB2Q99623 299 aa16.34■□□□□ 0.21
CLK1-205ENST00000434813 URM1Q9BTM9 101 aaKnown RBP16.34■□□□□ 0.21
CLK1-205ENST00000434813 BANF2Q9H503 90 aa16.34■□□□□ 0.21
CLK1-205ENST00000434813 FN3KRPQ9HA64 309 aa16.34■□□□□ 0.21
CLK1-205ENST00000434813 SDHAF2Q9NX18 166 aa16.34■□□□□ 0.21
CLK1-205ENST00000434813 ZNF224Q9NZL3 707 aa16.34■□□□□ 0.21
CLK1-205ENST00000434813 GHRLQ9UBU3 117 aa16.34■□□□□ 0.21
CLK1-205ENST00000434813 V9GYS6 101 aa16.34■□□□□ 0.21
CLK1-205ENST00000434813 MED12Q93074 2177 aa16.34■□□□□ 0.21
CLK1-205ENST00000434813 A0A0D9SG52 128 aa16.33■□□□□ 0.21
CLK1-205ENST00000434813 A0A1W2PP11 408 aa16.33■□□□□ 0.21
CLK1-205ENST00000434813 G3V3Y1 287 aa16.33■□□□□ 0.21
CLK1-205ENST00000434813 CRTAPO75718 401 aaPredicted RBP16.33■□□□□ 0.21
CLK1-205ENST00000434813 DHRS3O75911 302 aa16.33■□□□□ 0.21
CLK1-205ENST00000434813 ALDH3B1P43353 468 aa16.33■□□□□ 0.21
CLK1-205ENST00000434813 IL13RA1P78552 427 aa16.33■□□□□ 0.21
CLK1-205ENST00000434813 DBX2Q6ZNG2 339 aa16.33■□□□□ 0.21
CLK1-205ENST00000434813 Q6ZSR3 168 aa16.33■□□□□ 0.21
CLK1-205ENST00000434813 ARRDC1Q8N5I2 433 aa16.33■□□□□ 0.21
CLK1-205ENST00000434813 COQ8AQ8NI60 647 aa16.33■□□□□ 0.21
CLK1-205ENST00000434813 ST8SIA4Q92187 359 aa16.33■□□□□ 0.21
CLK1-205ENST00000434813 INTS12Q96CB8 462 aaKnown RBP16.33■□□□□ 0.21
CLK1-205ENST00000434813 CXorf58Q96LI9 332 aa16.33■□□□□ 0.21
CLK1-205ENST00000434813 JSRP1Q96MG2 331 aaPredicted RBP16.33■□□□□ 0.21
CLK1-205ENST00000434813 PIGQQ9BRB3 760 aa16.33■□□□□ 0.21
CLK1-205ENST00000434813 PDCD10Q9BUL8 212 aa16.33■□□□□ 0.21
CLK1-205ENST00000434813 KIAA1549Q9HCM3 1950 aa16.33■□□□□ 0.2
CLK1-205ENST00000434813 CCSO14618 274 aa16.33■□□□□ 0.2
CLK1-205ENST00000434813 SMAD9O15198 467 aaKnown RBP16.33■□□□□ 0.2
CLK1-205ENST00000434813 CBR3O75828 277 aa16.33■□□□□ 0.2
CLK1-205ENST00000434813 PMP2P02689 132 aa16.33■□□□□ 0.2
CLK1-205ENST00000434813 MGMTP16455 207 aa16.33■□□□□ 0.2
CLK1-205ENST00000434813 TMEM50BP56557 158 aa16.33■□□□□ 0.2
CLK1-205ENST00000434813 TAS2R31P59538 309 aa16.33■□□□□ 0.2
CLK1-205ENST00000434813 MICBQ29980 383 aa16.33■□□□□ 0.2
CLK1-205ENST00000434813 C11orf87Q6NUJ2 197 aa16.33■□□□□ 0.2
CLK1-205ENST00000434813 CRIP3Q6Q6R5 217 aa16.33■□□□□ 0.2
CLK1-205ENST00000434813 FAM89BQ8N5H3 189 aa16.33■□□□□ 0.2
CLK1-205ENST00000434813 FBXW5Q969U6 566 aa16.33■□□□□ 0.2
CLK1-205ENST00000434813 RYDENQ9NUL5 291 aaKnown RBP16.33■□□□□ 0.2
CLK1-205ENST00000434813 COMMD9Q9P000 198 aa16.33■□□□□ 0.2
CLK1-205ENST00000434813 TNFSF18Q9UNG2 199 aa16.33■□□□□ 0.2
CLK1-205ENST00000434813 FLVCR1Q9Y5Y0 555 aa16.33■□□□□ 0.2
CLK1-205ENST00000434813 R4GN57 208 aa16.33■□□□□ 0.2
CLK1-205ENST00000434813 A0A0J9YW62 118 aa16.32■□□□□ 0.2
CLK1-205ENST00000434813 OR5H15A6NDH6 313 aa16.32■□□□□ 0.2
CLK1-205ENST00000434813 ZSCAN5BA6NJL1 495 aa16.32■□□□□ 0.2
CLK1-205ENST00000434813 GJE1A6NN92 205 aa16.32■□□□□ 0.2
CLK1-205ENST00000434813 EFSO43281 561 aa16.32■□□□□ 0.2
CLK1-205ENST00000434813 DNPH1O43598 174 aa16.32■□□□□ 0.2
CLK1-205ENST00000434813 GALR2O43603 387 aaPredicted RBP16.32■□□□□ 0.2
CLK1-205ENST00000434813 RAD51DO75771 328 aa16.32■□□□□ 0.2
CLK1-205ENST00000434813 DUS4LO95620 317 aaKnown RBP16.32■□□□□ 0.2
CLK1-205ENST00000434813 SLC6A9P48067 706 aa16.32■□□□□ 0.2
CLK1-205ENST00000434813 RPS27AP62979 156 aaKnown RBP16.32■□□□□ 0.2
CLK1-205ENST00000434813 UBA52P62987 128 aaKnown RBP16.32■□□□□ 0.2
CLK1-205ENST00000434813 KISS1Q15726 138 aa16.32■□□□□ 0.2
CLK1-205ENST00000434813 KCNRGQ8N5I3 272 aa16.32■□□□□ 0.2
CLK1-205ENST00000434813 ZIC4Q8N9L1 334 aa16.32■□□□□ 0.2
CLK1-205ENST00000434813 CCDC54Q8NEL0 328 aa16.32■□□□□ 0.2
CLK1-205ENST00000434813 OR5M9Q8NGP3 310 aa16.32■□□□□ 0.2
CLK1-205ENST00000434813 PP6455Q8WZ26 134 aa16.32■□□□□ 0.2
CLK1-205ENST00000434813 OCSTAMPQ9BR26 566 aa16.32■□□□□ 0.2
CLK1-205ENST00000434813 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.32■□□□□ 0.25e-7■□□□□ 10.8
CLK1-205ENST00000434813 CEACAM18A8MTB9 384 aa16.31■□□□□ 0.2
CLK1-205ENST00000434813 F5H5K5 113 aa16.31■□□□□ 0.2
CLK1-205ENST00000434813 TNFSF11O14788 317 aa16.31■□□□□ 0.2
CLK1-205ENST00000434813 OR2F2O95006 317 aa16.31■□□□□ 0.2
CLK1-205ENST00000434813 NAT2P11245 290 aa16.31■□□□□ 0.2
CLK1-205ENST00000434813 CBX5P45973 191 aa16.31■□□□□ 0.2
CLK1-205ENST00000434813 OR2F1Q13607 317 aa16.31■□□□□ 0.2
CLK1-205ENST00000434813 PLA2G2CQ5R387 149 aa16.31■□□□□ 0.2
CLK1-205ENST00000434813 C20orf196Q8IYI0 205 aa16.31■□□□□ 0.2
CLK1-205ENST00000434813 ADAD2Q8NCV1 583 aaKnown RBP16.31■□□□□ 0.2
CLK1-205ENST00000434813 LIN37Q96GY3 246 aaPredicted RBP16.31■□□□□ 0.2
CLK1-205ENST00000434813 ARHGAP5-AS1Q96IT6 56 aa16.31■□□□□ 0.2
CLK1-205ENST00000434813 ULBP2Q9BZM5 246 aa16.31■□□□□ 0.2
CLK1-205ENST00000434813 CHST5Q9GZS9 411 aa16.31■□□□□ 0.2
CLK1-205ENST00000434813 OR10A2Q9H208 303 aa16.31■□□□□ 0.2
CLK1-205ENST00000434813 SLC39A1Q9NY26 324 aa16.31■□□□□ 0.2
CLK1-205ENST00000434813 FOXI3A8MTJ6 420 aaPredicted RBP16.31■□□□□ 0.2
CLK1-205ENST00000434813 SPDEFO95238 335 aa16.31■□□□□ 0.2
CLK1-205ENST00000434813 IGHEP01854 428 aa16.31■□□□□ 0.2
CLK1-205ENST00000434813 APOC1P02654 83 aa16.31■□□□□ 0.2
CLK1-205ENST00000434813 ZP3P21754 424 aa16.31■□□□□ 0.2
CLK1-205ENST00000434813 PTGFRP43088 359 aa16.31■□□□□ 0.2
CLK1-205ENST00000434813 ZNF84P51523 738 aa16.31■□□□□ 0.2
CLK1-205ENST00000434813 RSPO1Q2MKA7 263 aaPredicted RBP16.31■□□□□ 0.2
CLK1-205ENST00000434813 ZNF468Q5VIY5 522 aaPredicted RBP16.31■□□□□ 0.2
CLK1-205ENST00000434813 LRRC18Q8N456 261 aa16.31■□□□□ 0.2
CLK1-205ENST00000434813 TERB2Q8NHR7 220 aa16.31■□□□□ 0.2
CLK1-205ENST00000434813 PPP1R1CQ8WVI7 109 aa16.31■□□□□ 0.2
CLK1-205ENST00000434813 C10orf35Q96D05 121 aa16.31■□□□□ 0.2
CLK1-205ENST00000434813 SGCZQ96LD1 299 aa16.31■□□□□ 0.2
CLK1-205ENST00000434813 SF3B5Q9BWJ5 86 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms