RNA–Protein interactions for RNA: ENST00000432588.5

ACTB-205, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 568 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-205ENST00000432588 RNF133Q8WVZ7 376 aa13.37□□□□□ -0.27
ACTB-205ENST00000432588 SGK3Q96BR1 496 aa13.37□□□□□ -0.27
ACTB-205ENST00000432588 C12orf43Q96C57 262 aaKnown RBP13.37□□□□□ -0.27
ACTB-205ENST00000432588 DMRTB1Q96MA1 342 aa13.37□□□□□ -0.27
ACTB-205ENST00000432588 MICU1Q9BPX6 476 aa13.37□□□□□ -0.27
ACTB-205ENST00000432588 ABHD6Q9BV23 337 aa13.37□□□□□ -0.27
ACTB-205ENST00000432588 PAPOLGQ9BWT3 736 aaKnown RBP13.37□□□□□ -0.27
ACTB-205ENST00000432588 OR10A2Q9H208 303 aa13.37□□□□□ -0.27
ACTB-205ENST00000432588 DPAGT1Q9H3H5 408 aa13.37□□□□□ -0.27
ACTB-205ENST00000432588 RGCCQ9H4X1 137 aa13.37□□□□□ -0.27
ACTB-205ENST00000432588 CMC2Q9NRP2 79 aa13.37□□□□□ -0.27
ACTB-205ENST00000432588 ONECUT1Q9UBC0 465 aa13.37□□□□□ -0.27
ACTB-205ENST00000432588 PRPF19Q9UMS4 504 aaKnown RBP13.37□□□□□ -0.27
ACTB-205ENST00000432588 CAB39Q9Y376 341 aaPredicted RBP13.37□□□□□ -0.27
ACTB-205ENST00000432588 FAM96BQ9Y3D0 163 aa13.37□□□□□ -0.27
ACTB-205ENST00000432588 hCG_38984A0A1B0GV85 526 aa13.36□□□□□ -0.27
ACTB-205ENST00000432588 ANXA2P2A6NMY6 339 aa13.36□□□□□ -0.27
ACTB-205ENST00000432588 GPR137BO60478 399 aa13.36□□□□□ -0.27
ACTB-205ENST00000432588 PAICSP22234 425 aaKnown RBP13.36□□□□□ -0.27
ACTB-205ENST00000432588 GSTT1P30711 240 aa13.36□□□□□ -0.27
ACTB-205ENST00000432588 GSK3AP49840 483 aa13.36□□□□□ -0.27
ACTB-205ENST00000432588 ZNF121P58317 390 aaPredicted RBP13.36□□□□□ -0.27
ACTB-205ENST00000432588 RELBQ01201 579 aa13.36□□□□□ -0.27
ACTB-205ENST00000432588 IL5RAQ01344 420 aa13.36□□□□□ -0.27
ACTB-205ENST00000432588 PPP1R8Q12972 351 aaKnown RBP13.36□□□□□ -0.27
ACTB-205ENST00000432588 PDLIM3Q53GG5 364 aaPredicted RBP13.36□□□□□ -0.27
ACTB-205ENST00000432588 WDR38Q5JTN6 314 aa13.36□□□□□ -0.27
ACTB-205ENST00000432588 LINC01590Q5TEZ4 76 aa13.36□□□□□ -0.27
ACTB-205ENST00000432588 WDR82Q6UXN9 313 aa13.36□□□□□ -0.27
ACTB-205ENST00000432588 VMO1Q7Z5L0 202 aa13.36□□□□□ -0.27
ACTB-205ENST00000432588 DHFR2Q86XF0 187 aa13.36□□□□□ -0.27
ACTB-205ENST00000432588 LDLRAD3Q86YD5 345 aa13.36□□□□□ -0.27
ACTB-205ENST00000432588 C11orf53Q8IXP5 236 aa13.36□□□□□ -0.27
ACTB-205ENST00000432588 LRTOMTQ8WZ04 291 aa13.36□□□□□ -0.27
ACTB-205ENST00000432588 OTULINQ96BN8 352 aa13.36□□□□□ -0.27
ACTB-205ENST00000432588 CCT8L2Q96SF2 557 aa13.36□□□□□ -0.27
ACTB-205ENST00000432588 CCL13Q99616 98 aa13.36□□□□□ -0.27
ACTB-205ENST00000432588 ABCB9Q9NP78 766 aa13.36□□□□□ -0.27
ACTB-205ENST00000432588 DNAJC27Q9NZQ0 273 aa13.36□□□□□ -0.27
ACTB-205ENST00000432588 VWFP04275 2813 aa13.35□□□□□ -0.27
ACTB-205ENST00000432588 TGP01266 2768 aa13.35□□□□□ -0.27
ACTB-205ENST00000432588 A0A0U1RQK1 487 aa13.35□□□□□ -0.27
ACTB-205ENST00000432588 TCRBV5S2A0A599 114 aa13.35□□□□□ -0.27
ACTB-205ENST00000432588 H3BN98 237 aa13.35□□□□□ -0.27
ACTB-205ENST00000432588 M0QZ24 198 aa13.35□□□□□ -0.27
ACTB-205ENST00000432588 TIMM23O14925 209 aa13.35□□□□□ -0.27
ACTB-205ENST00000432588 NDUFB3O43676 98 aa13.35□□□□□ -0.27
ACTB-205ENST00000432588 IGHV4-59P01825 116 aa13.35□□□□□ -0.27
ACTB-205ENST00000432588 H2BFMP0C1H6 154 aa13.35□□□□□ -0.27
ACTB-205ENST00000432588 IER3P46695 156 aa13.35□□□□□ -0.27
ACTB-205ENST00000432588 CSNK2BP67870 215 aa13.35□□□□□ -0.27
ACTB-205ENST00000432588 SRSF4Q08170 494 aaKnown RBP13.35□□□□□ -0.27
ACTB-205ENST00000432588 MIDNQ504T8 468 aa13.35□□□□□ -0.27
ACTB-205ENST00000432588 LRRC10Q5BKY1 277 aa13.35□□□□□ -0.27
ACTB-205ENST00000432588 LCN8Q6JVE9 175 aa13.35□□□□□ -0.27
ACTB-205ENST00000432588 PRSS45Q7RTY3 260 aa13.35□□□□□ -0.27
ACTB-205ENST00000432588 PIGWQ7Z7B1 504 aa13.35□□□□□ -0.27
ACTB-205ENST00000432588 WDR86Q86TI4 376 aa13.35□□□□□ -0.27
ACTB-205ENST00000432588 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.35□□□□□ -0.27
ACTB-205ENST00000432588 PDZD9Q8IXQ8 264 aa13.35□□□□□ -0.27
ACTB-205ENST00000432588 GALNT4Q8N4A0 578 aa13.35□□□□□ -0.27
ACTB-205ENST00000432588 LY6G5BQ8NDX9 201 aa13.35□□□□□ -0.27
ACTB-205ENST00000432588 NPRL2Q8WTW4 380 aa13.35□□□□□ -0.27
ACTB-205ENST00000432588 PGAM5Q96HS1 289 aa13.35□□□□□ -0.27
ACTB-205ENST00000432588 CITED1Q99966 193 aa13.35□□□□□ -0.27
ACTB-205ENST00000432588 RTL8AQ9BWD3 113 aa13.35□□□□□ -0.27
ACTB-205ENST00000432588 BRD7Q9NPI1 651 aa13.35□□□□□ -0.27
ACTB-205ENST00000432588 PDP1Q9P0J1 537 aaPredicted RBP13.35□□□□□ -0.27
ACTB-205ENST00000432588 RNF114Q9Y508 228 aa13.35□□□□□ -0.27
ACTB-205ENST00000432588 BTBD17A6NE02 478 aa13.34□□□□□ -0.27
ACTB-205ENST00000432588 FAM183AA6NL82 134 aa13.34□□□□□ -0.27
ACTB-205ENST00000432588 B2RBV5 119 aa13.34□□□□□ -0.27
ACTB-205ENST00000432588 CDIPTO14735 213 aa13.34□□□□□ -0.27
ACTB-205ENST00000432588 FCN3O75636 299 aa13.34□□□□□ -0.27
ACTB-205ENST00000432588 GLCEO94923 617 aa13.34□□□□□ -0.27
ACTB-205ENST00000432588 OPRL1P41146 370 aa13.34□□□□□ -0.27
ACTB-205ENST00000432588 GNGT1P63211 74 aa13.34□□□□□ -0.27
ACTB-205ENST00000432588 GUCA2AQ02747 115 aa13.34□□□□□ -0.27
ACTB-205ENST00000432588 GK3PQ14409 553 aa13.34□□□□□ -0.27
ACTB-205ENST00000432588 METAP1DQ6UB28 335 aaPredicted RBP13.34□□□□□ -0.27
ACTB-205ENST00000432588 CD300LDQ6UXZ3 194 aa13.34□□□□□ -0.27
ACTB-205ENST00000432588 GDPGP1Q6ZNW5 385 aa13.34□□□□□ -0.27
ACTB-205ENST00000432588 FAM216BQ8N7L0 139 aa13.34□□□□□ -0.27
ACTB-205ENST00000432588 OR10G2Q8NGC3 310 aa13.34□□□□□ -0.27
ACTB-205ENST00000432588 ITPKCQ96DU7 683 aa13.34□□□□□ -0.27
ACTB-205ENST00000432588 TLNRD1Q9H1K6 362 aa13.34□□□□□ -0.27
ACTB-205ENST00000432588 MED20Q9H944 212 aa13.34□□□□□ -0.27
ACTB-205ENST00000432588 VNN3Q9NY84 501 aa13.34□□□□□ -0.27
ACTB-205ENST00000432588 DNAJB11Q9UBS4 358 aa13.34□□□□□ -0.27
ACTB-205ENST00000432588 RHBDD3Q9Y3P4 386 aa13.34□□□□□ -0.27
ACTB-205ENST00000432588 MPC1Q9Y5U8 109 aa13.34□□□□□ -0.27
ACTB-205ENST00000432588 NOTCH1P46531 2555 aa13.34□□□□□ -0.27
ACTB-205ENST00000432588 NKX6-3A6NJ46 265 aa13.33□□□□□ -0.28
ACTB-205ENST00000432588 TMEM210A6NLX4 147 aa13.33□□□□□ -0.28
ACTB-205ENST00000432588 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.33□□□□□ -0.28
ACTB-205ENST00000432588 ACOT8O14734 319 aa13.33□□□□□ -0.28
ACTB-205ENST00000432588 FBP1P09467 338 aa13.33□□□□□ -0.28
ACTB-205ENST00000432588 EEF1B2P24534 225 aaKnown RBP13.33□□□□□ -0.28
ACTB-205ENST00000432588 IKZF1Q13422 519 aa13.33□□□□□ -0.28
ACTB-205ENST00000432588 TRIM25Q14258 630 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms