RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 ZNF24P17028 368 aa11.24□□□□□ -0.61
DDX56-204ENST00000431640 ITGA3P26006 1051 aa11.24□□□□□ -0.61
DDX56-204ENST00000431640 STARP49675 285 aa11.24□□□□□ -0.61
DDX56-204ENST00000431640 CLDN15P56746 228 aa11.24□□□□□ -0.61
DDX56-204ENST00000431640 ZP1P60852 638 aa11.24□□□□□ -0.61
DDX56-204ENST00000431640 ARL6IP1Q15041 203 aa11.24□□□□□ -0.61
DDX56-204ENST00000431640 STK11Q15831 433 aa11.24□□□□□ -0.61
DDX56-204ENST00000431640 PNLIPRP3Q17RR3 467 aa11.24□□□□□ -0.61
DDX56-204ENST00000431640 RSPO1Q2MKA7 263 aaPredicted RBP11.24□□□□□ -0.61
DDX56-204ENST00000431640 NRN1LQ496H8 165 aa11.24□□□□□ -0.61
DDX56-204ENST00000431640 CHMP1BQ7LBR1 199 aa11.24□□□□□ -0.61
DDX56-204ENST00000431640 FJX1Q86VR8 437 aa11.24□□□□□ -0.61
DDX56-204ENST00000431640 SPACA3Q8IXA5 215 aa11.24□□□□□ -0.61
DDX56-204ENST00000431640 BPIFB2Q8N4F0 458 aa11.24□□□□□ -0.61
DDX56-204ENST00000431640 OR56B1Q8NGI3 324 aa11.24□□□□□ -0.61
DDX56-204ENST00000431640 OR4D10Q8NGI6 311 aa11.24□□□□□ -0.61
DDX56-204ENST00000431640 OR2T35Q8NGX2 323 aa11.24□□□□□ -0.61
DDX56-204ENST00000431640 SSC4DQ8WTU2 575 aa11.24□□□□□ -0.61
DDX56-204ENST00000431640 ROBO4Q8WZ75 1007 aa11.24□□□□□ -0.61
DDX56-204ENST00000431640 DVL3Q92997 716 aaPredicted RBP11.24□□□□□ -0.61
DDX56-204ENST00000431640 FBXO17Q96EF6 278 aa11.24□□□□□ -0.61
DDX56-204ENST00000431640 OR2A7Q96R45 310 aa11.24□□□□□ -0.61
DDX56-204ENST00000431640 CST11Q9H112 138 aa11.24□□□□□ -0.61
DDX56-204ENST00000431640 CRLF2Q9HC73 371 aa11.24□□□□□ -0.61
DDX56-204ENST00000431640 PARPBPQ9NWS1 579 aa11.24□□□□□ -0.61
DDX56-204ENST00000431640 SLC2A8Q9NY64 477 aa11.24□□□□□ -0.61
DDX56-204ENST00000431640 ZNF391Q9UJN7 358 aa11.24□□□□□ -0.61
DDX56-204ENST00000431640 PLEKHA6Q9Y2H5 1048 aa11.24□□□□□ -0.61
DDX56-204ENST00000431640 TIMM10BQ9Y5J6 103 aa11.24□□□□□ -0.61
DDX56-204ENST00000431640 TMEM235A6NFC5 223 aa11.24□□□□□ -0.61
DDX56-204ENST00000431640 ARGFXA6NJG6 315 aa11.24□□□□□ -0.61
DDX56-204ENST00000431640 VSIG10L2P0DP72 767 aa11.24□□□□□ -0.61
DDX56-204ENST00000431640 EIF2S3P41091 472 aaKnown RBP11.24□□□□□ -0.61
DDX56-204ENST00000431640 MPPED2Q15777 294 aa11.24□□□□□ -0.61
DDX56-204ENST00000431640 GFOD2Q3B7J2 385 aa11.24□□□□□ -0.61
DDX56-204ENST00000431640 RNASE10Q5GAN6 216 aaKnown RBP11.24□□□□□ -0.61
DDX56-204ENST00000431640 IDO2Q6ZQW0 420 aa11.24□□□□□ -0.61
DDX56-204ENST00000431640 TRAPPC6BQ86SZ2 158 aa11.24□□□□□ -0.61
DDX56-204ENST00000431640 NAA40Q86UY6 237 aa11.24□□□□□ -0.61
DDX56-204ENST00000431640 OR1F12Q8NHA8 337 aa11.24□□□□□ -0.61
DDX56-204ENST00000431640 CPNE2Q96FN4 548 aaPredicted RBP11.24□□□□□ -0.61
DDX56-204ENST00000431640 S100A13Q99584 98 aa11.24□□□□□ -0.61
DDX56-204ENST00000431640 LPAR5Q9H1C0 372 aa11.24□□□□□ -0.61
DDX56-204ENST00000431640 IFT46Q9NQC8 304 aa11.24□□□□□ -0.61
DDX56-204ENST00000431640 MGAQ8IWI9 3026 aa11.24□□□□□ -0.61
DDX56-204ENST00000431640 IGKV3D-15A0A087WSY6 115 aa11.23□□□□□ -0.61
DDX56-204ENST00000431640 TMEM82A0PJX8 343 aa11.23□□□□□ -0.61
DDX56-204ENST00000431640 PINLYPA6NC86 204 aa11.23□□□□□ -0.61
DDX56-204ENST00000431640 OR6C65A6NJZ3 312 aa11.23□□□□□ -0.61
DDX56-204ENST00000431640 SYNGR3O43761 229 aa11.23□□□□□ -0.61
DDX56-204ENST00000431640 CDC14BO60729 498 aa11.23□□□□□ -0.61
DDX56-204ENST00000431640 RGS11O94810 467 aa11.23□□□□□ -0.61
DDX56-204ENST00000431640 TPOP07202 933 aa11.23□□□□□ -0.61
DDX56-204ENST00000431640 ZNF735P0CB33 412 aa11.23□□□□□ -0.61
DDX56-204ENST00000431640 CRYGSP22914 178 aa11.23□□□□□ -0.61
DDX56-204ENST00000431640 CBX5P45973 191 aa11.23□□□□□ -0.61
DDX56-204ENST00000431640 SNRPD2P62316 118 aaKnown RBP11.23□□□□□ -0.61
DDX56-204ENST00000431640 OR1C1Q15619 314 aa11.23□□□□□ -0.61
DDX56-204ENST00000431640 KISS1Q15726 138 aa11.23□□□□□ -0.61
DDX56-204ENST00000431640 C4orf46Q504U0 113 aa11.23□□□□□ -0.61
DDX56-204ENST00000431640 SULF2Q8IWU5 870 aa11.23□□□□□ -0.61
DDX56-204ENST00000431640 STEAP2Q8NFT2 490 aa11.23□□□□□ -0.61
DDX56-204ENST00000431640 SGK3Q96BR1 496 aa11.23□□□□□ -0.61
DDX56-204ENST00000431640 ZNF775Q96BV0 537 aaPredicted RBP11.23□□□□□ -0.61
DDX56-204ENST00000431640 RAB3CQ96E17 227 aa11.23□□□□□ -0.61
DDX56-204ENST00000431640 LYZL4Q96KX0 146 aa11.23□□□□□ -0.61
DDX56-204ENST00000431640 FOXB1Q99853 325 aa11.23□□□□□ -0.61
DDX56-204ENST00000431640 SOX7Q9BT81 388 aa11.23□□□□□ -0.61
DDX56-204ENST00000431640 TMEM59Q9BXS4 323 aa11.23□□□□□ -0.61
DDX56-204ENST00000431640 LINC00470Q9BZP3 86 aa11.23□□□□□ -0.61
DDX56-204ENST00000431640 SELENOIQ9C0D9 397 aa11.23□□□□□ -0.61
DDX56-204ENST00000431640 CHST5Q9GZS9 411 aa11.23□□□□□ -0.61
DDX56-204ENST00000431640 RGCCQ9H4X1 137 aa11.23□□□□□ -0.61
DDX56-204ENST00000431640 ZMAT3Q9HA38 289 aaKnown RBP11.23□□□□□ -0.61
DDX56-204ENST00000431640 EIF3KQ9UBQ5 218 aaKnown RBP11.23□□□□□ -0.61
DDX56-204ENST00000431640 RAXQ9Y2V3 346 aa11.23□□□□□ -0.61
DDX56-204ENST00000431640 ZNF891A8MT65 544 aaPredicted RBP11.22□□□□□ -0.61
DDX56-204ENST00000431640 FARS2O95363 451 aaKnown RBP11.22□□□□□ -0.61
DDX56-204ENST00000431640 SYNGR4O95473 234 aa11.22□□□□□ -0.61
DDX56-204ENST00000431640 MPIG6BO95866 241 aa11.22□□□□□ -0.61
DDX56-204ENST00000431640 NAT2P11245 290 aa11.22□□□□□ -0.61
DDX56-204ENST00000431640 PTGFRP43088 359 aa11.22□□□□□ -0.61
DDX56-204ENST00000431640 OR3A4PP47883 348 aa11.22□□□□□ -0.61
DDX56-204ENST00000431640 GNG2P59768 71 aa11.22□□□□□ -0.61
DDX56-204ENST00000431640 ACTBL2Q562R1 376 aa11.22□□□□□ -0.61
DDX56-204ENST00000431640 CLVS2Q5SYC1 327 aa11.22□□□□□ -0.61
DDX56-204ENST00000431640 RTL6Q6ICC9 239 aa11.22□□□□□ -0.61
DDX56-204ENST00000431640 SEMA6DQ8NFY4 1073 aa11.22□□□□□ -0.61
DDX56-204ENST00000431640 OR11H4Q8NGC9 324 aa11.22□□□□□ -0.61
DDX56-204ENST00000431640 ZNF837Q96EG3 531 aaPredicted RBP11.22□□□□□ -0.61
DDX56-204ENST00000431640 C1orf147Q96MC9 270 aaPredicted RBP11.22□□□□□ -0.61
DDX56-204ENST00000431640 SIGLEC12Q96PQ1 595 aa11.22□□□□□ -0.61
DDX56-204ENST00000431640 TMPRSS13Q9BYE2 586 aa11.22□□□□□ -0.61
DDX56-204ENST00000431640 TINAGL1Q9GZM7 467 aaPredicted RBP11.22□□□□□ -0.61
DDX56-204ENST00000431640 ZNF703Q9H7S9 590 aaPredicted RBP11.22□□□□□ -0.61
DDX56-204ENST00000431640 RNF122Q9H9V4 155 aa11.22□□□□□ -0.61
DDX56-204ENST00000431640 GPR35Q9HC97 309 aa11.22□□□□□ -0.61
DDX56-204ENST00000431640 PIGLQ9Y2B2 252 aa11.22□□□□□ -0.61
DDX56-204ENST00000431640 KLF13Q9Y2Y9 288 aaPredicted RBP11.22□□□□□ -0.61
DDX56-204ENST00000431640 IGKV1-9A0A0C4DH69 117 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms