RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 PEX19P40855 299 aa1.96□□□□□ -2.1
HMGB1P27-201ENST00000431429 SLC1A2P43004 574 aa1.96□□□□□ -2.1
HMGB1P27-201ENST00000431429 CYB561P49447 251 aa1.96□□□□□ -2.1
HMGB1P27-201ENST00000431429 FABP6P51161 128 aa1.96□□□□□ -2.1
HMGB1P27-201ENST00000431429 PRPSAP1Q14558 356 aa1.96□□□□□ -2.1
HMGB1P27-201ENST00000431429 KIR2DS1Q14954 304 aa1.96□□□□□ -2.1
HMGB1P27-201ENST00000431429 PTPN20Q4JDL3 420 aa1.96□□□□□ -2.1
HMGB1P27-201ENST00000431429 THEM4Q5T1C6 240 aa1.96□□□□□ -2.1
HMGB1P27-201ENST00000431429 TSPO2Q5TGU0 170 aa1.96□□□□□ -2.1
HMGB1P27-201ENST00000431429 DNAJC24Q6P3W2 148 aa1.96□□□□□ -2.1
HMGB1P27-201ENST00000431429 ARL9Q6T311 187 aa1.96□□□□□ -2.1
HMGB1P27-201ENST00000431429 Q6ZR03 302 aa1.96□□□□□ -2.1
HMGB1P27-201ENST00000431429 MRPL21Q7Z2W9 205 aaKnown RBP1.96□□□□□ -2.1
HMGB1P27-201ENST00000431429 MYOCDQ8IZQ8 938 aa1.96□□□□□ -2.1
HMGB1P27-201ENST00000431429 CMTM8Q8IZV2 173 aa1.96□□□□□ -2.1
HMGB1P27-201ENST00000431429 ARRDC1Q8N5I2 433 aa1.96□□□□□ -2.1
HMGB1P27-201ENST00000431429 FAM86B1Q8N7N1 296 aa1.96□□□□□ -2.1
HMGB1P27-201ENST00000431429 ZNF321PQ8N8H1 164 aa1.96□□□□□ -2.1
HMGB1P27-201ENST00000431429 FAM184AQ8NB25 1140 aa1.96□□□□□ -2.1
HMGB1P27-201ENST00000431429 PROKR2Q8NFJ6 384 aa1.96□□□□□ -2.1
HMGB1P27-201ENST00000431429 OR10W1Q8NGF6 305 aa1.96□□□□□ -2.1
HMGB1P27-201ENST00000431429 OR52K1Q8NGK4 314 aa1.96□□□□□ -2.1
HMGB1P27-201ENST00000431429 OR5AR1Q8NGP9 310 aa1.96□□□□□ -2.1
HMGB1P27-201ENST00000431429 ABHD3Q8WU67 409 aa1.96□□□□□ -2.1
HMGB1P27-201ENST00000431429 EEF1AKMT3Q96AZ1 226 aa1.96□□□□□ -2.1
HMGB1P27-201ENST00000431429 ECHDC3Q96DC8 303 aa1.96□□□□□ -2.1
HMGB1P27-201ENST00000431429 RNF145Q96MT1 663 aa1.96□□□□□ -2.1
HMGB1P27-201ENST00000431429 MICU1Q9BPX6 476 aa1.96□□□□□ -2.1
HMGB1P27-201ENST00000431429 SAMD10Q9BYL1 202 aa1.96□□□□□ -2.1
HMGB1P27-201ENST00000431429 IL22Q9GZX6 179 aa1.96□□□□□ -2.1
HMGB1P27-201ENST00000431429 RGCCQ9H4X1 137 aa1.96□□□□□ -2.1
HMGB1P27-201ENST00000431429 YARS2Q9Y2Z4 477 aaKnown RBP1.96□□□□□ -2.1
HMGB1P27-201ENST00000431429 PRRC2BQ5JSZ5 2229 aaKnown RBP1.96□□□□□ -2.1
HMGB1P27-201ENST00000431429 FAM186AA6NE01 2351 aa1.96□□□□□ -2.1
HMGB1P27-201ENST00000431429 GPR179Q6PRD1 2367 aa1.96□□□□□ -2.1
HMGB1P27-201ENST00000431429 FASNP49327 2511 aaKnown RBP1.96□□□□□ -2.1
HMGB1P27-201ENST00000431429 FLNBO75369 2602 aaKnown RBP1.96□□□□□ -2.1
HMGB1P27-201ENST00000431429 ARID1AO14497 2285 aa1.96□□□□□ -2.1
HMGB1P27-201ENST00000431429 CACNA1HO95180 2353 aa1.95□□□□□ -2.1
HMGB1P27-201ENST00000431429 MYO10Q9HD67 2058 aa1.95□□□□□ -2.1
HMGB1P27-201ENST00000431429 MYO9BQ13459 2157 aa1.95□□□□□ -2.1
HMGB1P27-201ENST00000431429 FAM208BQ5VWN6 2430 aa1.95□□□□□ -2.1
HMGB1P27-201ENST00000431429 IGLV1-50A0A075B6I6 118 aa1.95□□□□□ -2.1
HMGB1P27-201ENST00000431429 IGHV5-10-1A0A0J9YXX1 117 aa1.95□□□□□ -2.1
HMGB1P27-201ENST00000431429 A0A0U1RQV1 116 aa1.95□□□□□ -2.1
HMGB1P27-201ENST00000431429 TMEM120BA0PK00 339 aa1.95□□□□□ -2.1
HMGB1P27-201ENST00000431429 C11orf94C9JXX5 98 aa1.95□□□□□ -2.1
HMGB1P27-201ENST00000431429 H7C417 338 aa1.95□□□□□ -2.1
HMGB1P27-201ENST00000431429 ANGPTL7O43827 346 aa1.95□□□□□ -2.1
HMGB1P27-201ENST00000431429 HPRT1P00492 218 aa1.95□□□□□ -2.1
HMGB1P27-201ENST00000431429 FABP3P05413 133 aa1.95□□□□□ -2.1
HMGB1P27-201ENST00000431429 BCHEP06276 602 aa1.95□□□□□ -2.1
HMGB1P27-201ENST00000431429 CD3GP09693 182 aa1.95□□□□□ -2.1
HMGB1P27-201ENST00000431429 IGHV1-8P0DP01 117 aa1.95□□□□□ -2.1
HMGB1P27-201ENST00000431429 ZNF823P16415 610 aa1.95□□□□□ -2.1
HMGB1P27-201ENST00000431429 GGT1P19440 569 aa1.95□□□□□ -2.1
HMGB1P27-201ENST00000431429 CSNK2A2P19784 350 aaPredicted RBP1.95□□□□□ -2.1
HMGB1P27-201ENST00000431429 USF1P22415 310 aaPredicted RBP1.95□□□□□ -2.1
HMGB1P27-201ENST00000431429 CEACAM6P40199 344 aa1.95□□□□□ -2.1
HMGB1P27-201ENST00000431429 RFC3P40938 356 aa1.95□□□□□ -2.1
HMGB1P27-201ENST00000431429 UBE2AP49459 152 aa1.95□□□□□ -2.1
HMGB1P27-201ENST00000431429 CAPRIN1Q14444 709 aaKnown RBP1.95□□□□□ -2.1
HMGB1P27-201ENST00000431429 GCSAMLQ5JQS6 135 aa1.95□□□□□ -2.1
HMGB1P27-201ENST00000431429 AVPI1Q5T686 147 aa1.95□□□□□ -2.1
HMGB1P27-201ENST00000431429 TPTE2P1Q5T6R2 138 aa1.95□□□□□ -2.1
HMGB1P27-201ENST00000431429 N4BP2L1Q5TBK1 243 aaPredicted RBP1.95□□□□□ -2.1
HMGB1P27-201ENST00000431429 Q5W150 140 aa1.95□□□□□ -2.1
HMGB1P27-201ENST00000431429 TTC19Q6DKK2 380 aaPredicted RBP1.95□□□□□ -2.1
HMGB1P27-201ENST00000431429 TMEM205Q6UW68 189 aa1.95□□□□□ -2.1
HMGB1P27-201ENST00000431429 WDR82Q6UXN9 313 aa1.95□□□□□ -2.1
HMGB1P27-201ENST00000431429 ASCL4Q6XD76 172 aa1.95□□□□□ -2.1
HMGB1P27-201ENST00000431429 NTM-AS1Q6ZSK4 140 aa1.95□□□□□ -2.1
HMGB1P27-201ENST00000431429 LINC00523Q86TU6 105 aa1.95□□□□□ -2.1
HMGB1P27-201ENST00000431429 Q8N9L7 120 aa1.95□□□□□ -2.1
HMGB1P27-201ENST00000431429 CHST4Q8NCG5 386 aa1.95□□□□□ -2.1
HMGB1P27-201ENST00000431429 OR51F2Q8NH61 342 aa1.95□□□□□ -2.1
HMGB1P27-201ENST00000431429 NRBF2Q96F24 287 aa1.95□□□□□ -2.1
HMGB1P27-201ENST00000431429 CSPG4P5Q96PW8 444 aa1.95□□□□□ -2.1
HMGB1P27-201ENST00000431429 FOXC2Q99958 501 aa1.95□□□□□ -2.1
HMGB1P27-201ENST00000431429 AGMATQ9BSE5 352 aa1.95□□□□□ -2.1
HMGB1P27-201ENST00000431429 SLC25A2Q9BXI2 301 aa1.95□□□□□ -2.1
HMGB1P27-201ENST00000431429 SLC17A9Q9BYT1 436 aa1.95□□□□□ -2.1
HMGB1P27-201ENST00000431429 BEX1Q9HBH7 125 aa1.95□□□□□ -2.1
HMGB1P27-201ENST00000431429 PXMP2Q9NR77 195 aa1.95□□□□□ -2.1
HMGB1P27-201ENST00000431429 UVRAGQ9P2Y5 699 aa1.95□□□□□ -2.1
HMGB1P27-201ENST00000431429 MTFP1Q9UDX5 166 aa1.95□□□□□ -2.1
HMGB1P27-201ENST00000431429 NCOR2Q9Y618 2525 aa1.95□□□□□ -2.1
HMGB1P27-201ENST00000431429 DOCK9Q9BZ29 2069 aa1.95□□□□□ -2.1
HMGB1P27-201ENST00000431429 ALPK3Q96L96 1907 aa1.95□□□□□ -2.1
HMGB1P27-201ENST00000431429 CHD9Q3L8U1 2897 aa1.95□□□□□ -2.1
HMGB1P27-201ENST00000431429 ZNF292O60281 2723 aa1.95□□□□□ -2.1
HMGB1P27-201ENST00000431429 REV3LO60673 3130 aa1.95□□□□□ -2.1
HMGB1P27-201ENST00000431429 MYO15AQ9UKN7 3530 aa1.95□□□□□ -2.1
HMGB1P27-201ENST00000431429 LRRC37A2A6NM11 1700 aa1.94□□□□□ -2.1
HMGB1P27-201ENST00000431429 C2orf16Q68DN1 1984 aa1.94□□□□□ -2.1
HMGB1P27-201ENST00000431429 DNAH14Q0VDD8 3507 aa1.94□□□□□ -2.1
HMGB1P27-201ENST00000431429 NUP214P35658 2090 aaPredicted RBP1.94□□□□□ -2.1
HMGB1P27-201ENST00000431429 COL4A6Q14031 1691 aa1.94□□□□□ -2.1
HMGB1P27-201ENST00000431429 IGHV3OR16-9A0A0B4J2B5 98 aa1.94□□□□□ -2.1
HMGB1P27-201ENST00000431429 IGKV1-8A0A0C4DH67 115 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms