RNA–Protein interactions for RNA: ENST00000431357.1

USP4-205, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 5

Gene USP4, Length 2,141 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-205ENST00000431357 P2RY4P51582 365 aa9.98□□□□□ -0.81
USP4-205ENST00000431357 ARL6IP1Q15041 203 aa9.98□□□□□ -0.81
USP4-205ENST00000431357 PLEKHN1Q494U1 663 aaPredicted RBP9.98□□□□□ -0.81
USP4-205ENST00000431357 PLAC9Q5JTB6 97 aa9.98□□□□□ -0.81
USP4-205ENST00000431357 PTCRAQ6ISU1 281 aaPredicted RBP9.98□□□□□ -0.81
USP4-205ENST00000431357 TMEM71Q6P5X7 295 aa9.98□□□□□ -0.81
USP4-205ENST00000431357 PEG10Q86TG7 708 aaKnown RBP9.98□□□□□ -0.81
USP4-205ENST00000431357 ARMC10Q8N2F6 343 aa9.98□□□□□ -0.81
USP4-205ENST00000431357 PNLDC1Q8NA58 520 aaKnown RBP9.98□□□□□ -0.81
USP4-205ENST00000431357 OR1S2Q8NGQ3 325 aa9.98□□□□□ -0.81
USP4-205ENST00000431357 OR5H2Q8NGV7 314 aa9.98□□□□□ -0.81
USP4-205ENST00000431357 NARS2Q96I59 477 aaKnown RBP9.98□□□□□ -0.81
USP4-205ENST00000431357 RNF126Q9BV68 326 aa9.98□□□□□ -0.81
USP4-205ENST00000431357 METTL7AQ9H8H3 244 aa9.98□□□□□ -0.81
USP4-205ENST00000431357 TMEM100Q9NV29 134 aa9.98□□□□□ -0.81
USP4-205ENST00000431357 FLVCR1Q9Y5Y0 555 aa9.98□□□□□ -0.81
USP4-205ENST00000431357 TMEM218A2RU14 115 aa9.98□□□□□ -0.81
USP4-205ENST00000431357 ZNF726A6NNF4 738 aa9.98□□□□□ -0.81
USP4-205ENST00000431357 SHISA8B8ZZ34 492 aa9.98□□□□□ -0.81
USP4-205ENST00000431357 MFNGO00587 321 aa9.98□□□□□ -0.81
USP4-205ENST00000431357 CD79AP11912 226 aa9.98□□□□□ -0.81
USP4-205ENST00000431357 CTSSP25774 331 aa9.98□□□□□ -0.81
USP4-205ENST00000431357 ADH6P28332 368 aa9.98□□□□□ -0.81
USP4-205ENST00000431357 PTGDSP41222 190 aa9.98□□□□□ -0.81
USP4-205ENST00000431357 OR3A4PP47883 348 aa9.98□□□□□ -0.81
USP4-205ENST00000431357 TMEM50BP56557 158 aa9.98□□□□□ -0.81
USP4-205ENST00000431357 TAS2R46P59540 309 aa9.98□□□□□ -0.81
USP4-205ENST00000431357 AIMP2Q13155 320 aaKnown RBP9.98□□□□□ -0.81
USP4-205ENST00000431357 HIST3H3Q16695 136 aa9.98□□□□□ -0.81
USP4-205ENST00000431357 PRSS54Q6PEW0 395 aa9.98□□□□□ -0.81
USP4-205ENST00000431357 UNQ6126/PRO20091Q6UXV3 157 aa9.98□□□□□ -0.81
USP4-205ENST00000431357 Q7L0L9 218 aa9.98□□□□□ -0.81
USP4-205ENST00000431357 SLC25A45Q8N413 288 aa9.98□□□□□ -0.81
USP4-205ENST00000431357 FAM89BQ8N5H3 189 aa9.98□□□□□ -0.81
USP4-205ENST00000431357 ZNF283Q8N7M2 679 aa9.98□□□□□ -0.81
USP4-205ENST00000431357 TMEM104Q8NE00 496 aa9.98□□□□□ -0.81
USP4-205ENST00000431357 SSC4DQ8WTU2 575 aa9.98□□□□□ -0.81
USP4-205ENST00000431357 ARL11Q969Q4 196 aa9.98□□□□□ -0.81
USP4-205ENST00000431357 GPER1Q99527 375 aa9.98□□□□□ -0.81
USP4-205ENST00000431357 OR10A2Q9H208 303 aa9.98□□□□□ -0.81
USP4-205ENST00000431357 C5orf66Q9H5L9 145 aa9.98□□□□□ -0.81
USP4-205ENST00000431357 ASF1BQ9NVP2 202 aa9.98□□□□□ -0.81
USP4-205ENST00000431357 ASH2LQ9UBL3 628 aa9.98□□□□□ -0.81
USP4-205ENST00000431357 PURGQ9UJV8 347 aaKnown RBP9.98□□□□□ -0.81
USP4-205ENST00000431357 HDGFL3Q9Y3E1 203 aa9.98□□□□□ -0.81
USP4-205ENST00000431357 B3GALT1Q9Y5Z6 326 aa9.98□□□□□ -0.81
USP4-205ENST00000431357 EXPH5Q8NEV8 1989 aa9.98□□□□□ -0.81
USP4-205ENST00000431357 PMS2P1A4D2B8 440 aa9.97□□□□□ -0.81
USP4-205ENST00000431357 CRTAPO75718 401 aaPredicted RBP9.97□□□□□ -0.81
USP4-205ENST00000431357 S100A9P06702 114 aaKnown RBP9.97□□□□□ -0.81
USP4-205ENST00000431357 PET100P0DJ07 73 aa9.97□□□□□ -0.81
USP4-205ENST00000431357 PRF1P14222 555 aa9.97□□□□□ -0.81
USP4-205ENST00000431357 ZNF43P17038 809 aa9.97□□□□□ -0.81
USP4-205ENST00000431357 AMY2BP19961 511 aa9.97□□□□□ -0.81
USP4-205ENST00000431357 ALDH3B1P43353 468 aa9.97□□□□□ -0.81
USP4-205ENST00000431357 SLC6A9P48067 706 aa9.97□□□□□ -0.81
USP4-205ENST00000431357 EIF5AP63241 154 aaKnown RBP9.97□□□□□ -0.81
USP4-205ENST00000431357 DCDP81605 110 aaKnown RBP9.97□□□□□ -0.81
USP4-205ENST00000431357 ECH1Q13011 328 aa9.97□□□□□ -0.81
USP4-205ENST00000431357 SMAD4Q13485 552 aaKnown RBP9.97□□□□□ -0.81
USP4-205ENST00000431357 ARFRP1Q13795 201 aa9.97□□□□□ -0.81
USP4-205ENST00000431357 SGCAQ16586 387 aa9.97□□□□□ -0.81
USP4-205ENST00000431357 RTL6Q6ICC9 239 aa9.97□□□□□ -0.81
USP4-205ENST00000431357 CPEB2Q7Z5Q1 589 aaKnown RBP9.97□□□□□ -0.81
USP4-205ENST00000431357 LHFPL1Q86WI0 220 aa9.97□□□□□ -0.81
USP4-205ENST00000431357 SVBPQ8N300 66 aa9.97□□□□□ -0.81
USP4-205ENST00000431357 CCDC54Q8NEL0 328 aa9.97□□□□□ -0.81
USP4-205ENST00000431357 OR2M3Q8NG83 312 aa9.97□□□□□ -0.81
USP4-205ENST00000431357 OR2I1PQ8NGU4 316 aa9.97□□□□□ -0.81
USP4-205ENST00000431357 TMEM230Q96A57 120 aa9.97□□□□□ -0.81
USP4-205ENST00000431357 FAM71F1Q96KD3 344 aaPredicted RBP9.97□□□□□ -0.81
USP4-205ENST00000431357 WDR77Q9BQA1 342 aaPredicted RBP9.97□□□□□ -0.81
USP4-205ENST00000431357 OR51M1Q9H341 326 aa9.97□□□□□ -0.81
USP4-205ENST00000431357 PNRC2Q9NPJ4 139 aaKnown RBP9.97□□□□□ -0.81
USP4-205ENST00000431357 GSN-AS1Q9NRJ2 163 aa9.97□□□□□ -0.81
USP4-205ENST00000431357 MYOTQ9UBF9 498 aa9.97□□□□□ -0.81
USP4-205ENST00000431357 EDARQ9UNE0 448 aa9.97□□□□□ -0.81
USP4-205ENST00000431357 MRPS17Q9Y2R5 130 aaKnown RBP9.97□□□□□ -0.81
USP4-205ENST00000431357 SEC16AO15027 2179 aa9.97□□□□□ -0.81
USP4-205ENST00000431357 CA11O75493 328 aa9.97□□□□□ -0.81
USP4-205ENST00000431357 ONECUT2O95948 504 aa9.97□□□□□ -0.81
USP4-205ENST00000431357 QDPRP09417 244 aa9.97□□□□□ -0.81
USP4-205ENST00000431357 THBS4P35443 961 aa9.97□□□□□ -0.81
USP4-205ENST00000431357 OR3A2P47893 321 aa9.97□□□□□ -0.81
USP4-205ENST00000431357 LSM6P62312 80 aaKnown RBP9.97□□□□□ -0.81
USP4-205ENST00000431357 PPA1Q15181 289 aa9.97□□□□□ -0.81
USP4-205ENST00000431357 SURF2Q15527 256 aaPredicted RBP9.97□□□□□ -0.81
USP4-205ENST00000431357 FAM69BQ5VUD6 431 aa9.97□□□□□ -0.81
USP4-205ENST00000431357 DRAM2Q6UX65 266 aa9.97□□□□□ -0.81
USP4-205ENST00000431357 CLEC18BQ6UXF7 455 aa9.97□□□□□ -0.81
USP4-205ENST00000431357 OR14K1Q8NGZ2 314 aa9.97□□□□□ -0.81
USP4-205ENST00000431357 RHBDD1Q8TEB9 315 aa9.97□□□□□ -0.81
USP4-205ENST00000431357 ARHGAP5-AS1Q96IT6 56 aa9.97□□□□□ -0.81
USP4-205ENST00000431357 OR5B2Q96R09 309 aa9.97□□□□□ -0.81
USP4-205ENST00000431357 TSNAXQ99598 290 aaKnown RBP9.97□□□□□ -0.81
USP4-205ENST00000431357 BANF2Q9H503 90 aa9.97□□□□□ -0.81
USP4-205ENST00000431357 CYTL1Q9NRR1 136 aa9.97□□□□□ -0.81
USP4-205ENST00000431357 DNAJB11Q9UBS4 358 aa9.97□□□□□ -0.81
USP4-205ENST00000431357 C19orf25Q9UFG5 118 aaPredicted RBP9.97□□□□□ -0.81
USP4-205ENST00000431357 MLXQ9UH92 298 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms