RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 PRKNO60260 465 aaPredicted RBP4.78□□□□□ -1.64
PTPN4-203ENST00000430976 MAS1P04201 325 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 TYRP14679 529 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 IDSP22304 550 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 SLC6A1P30531 599 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 NTSP30990 170 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 DVL1P1P54792 670 aaPredicted RBP4.78□□□□□ -1.64
PTPN4-203ENST00000430976 VWC2Q2TAL6 325 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 DEFB115Q30KQ5 88 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 TP53I3Q53FA7 332 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 C1orf195Q5TG92 126 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 OAFQ86UD1 273 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 KRTCAP2Q8N6L1 136 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 WDR31Q8NA23 367 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 C5orf17Q8NAS9 161 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 CLEC4DQ8WXI8 215 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 ZC3HAV1LQ96H79 300 aaKnown RBP4.78□□□□□ -1.64
PTPN4-203ENST00000430976 FIZ1Q96SL8 496 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 INSM2Q96T92 566 aaPredicted RBP4.78□□□□□ -1.64
PTPN4-203ENST00000430976 KATNBL1Q9H079 304 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 SPHK2Q9NRA0 654 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 JPT1Q9UK76 154 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 BTRCQ9Y297 605 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 IGSF9BQ9UPX0 1349 aa4.78□□□□□ -1.64
PTPN4-203ENST00000430976 SUPT6HQ7KZ85 1726 aaKnown RBP4.77□□□□□ -1.65
PTPN4-203ENST00000430976 NEURL4Q96JN8 1562 aa4.77□□□□□ -1.65
PTPN4-203ENST00000430976 GXYLT2A0PJZ3 443 aa4.77□□□□□ -1.65
PTPN4-203ENST00000430976 COLCA2A8K830 154 aa4.77□□□□□ -1.65
PTPN4-203ENST00000430976 DVL1O14640 695 aa4.77□□□□□ -1.65
PTPN4-203ENST00000430976 SYNGR3O43761 229 aa4.77□□□□□ -1.65
PTPN4-203ENST00000430976 PRNPP04156 253 aa4.77□□□□□ -1.65
PTPN4-203ENST00000430976 H1F0P07305 194 aaKnown RBP4.77□□□□□ -1.65
PTPN4-203ENST00000430976 SLC35E2P0CK97 266 aa4.77□□□□□ -1.65
PTPN4-203ENST00000430976 ZBTB25P24278 435 aa4.77□□□□□ -1.65
PTPN4-203ENST00000430976 OR10J1P30954 320 aa4.77□□□□□ -1.65
PTPN4-203ENST00000430976 FOXL1Q12952 345 aa4.77□□□□□ -1.65
PTPN4-203ENST00000430976 UTF1Q5T230 341 aa4.77□□□□□ -1.65
PTPN4-203ENST00000430976 LAIR1Q6GTX8 287 aa4.77□□□□□ -1.65
PTPN4-203ENST00000430976 PWWP2BQ6NUJ5 590 aa4.77□□□□□ -1.65
PTPN4-203ENST00000430976 RPL22L1Q6P5R6 122 aaKnown RBP4.77□□□□□ -1.65
PTPN4-203ENST00000430976 DHRS11Q6UWP2 260 aa4.77□□□□□ -1.65
PTPN4-203ENST00000430976 ADAMTSL5Q6ZMM2 481 aa4.77□□□□□ -1.65
PTPN4-203ENST00000430976 IL17RELQ6ZVW7 336 aa4.77□□□□□ -1.65
PTPN4-203ENST00000430976 TSLPQ969D9 159 aa4.77□□□□□ -1.65
PTPN4-203ENST00000430976 MYADMQ96S97 322 aa4.77□□□□□ -1.65
PTPN4-203ENST00000430976 MIEN1Q9BRT3 115 aa4.77□□□□□ -1.65
PTPN4-203ENST00000430976 ZMAT4Q9H898 229 aa4.77□□□□□ -1.65
PTPN4-203ENST00000430976 RLIMQ9NVW2 624 aa4.77□□□□□ -1.65
PTPN4-203ENST00000430976 KIAA2026Q5HYC2 2103 aa4.77□□□□□ -1.65
PTPN4-203ENST00000430976 GAGE12HA6NDE8 117 aa4.77□□□□□ -1.65
PTPN4-203ENST00000430976 ZNF878C9JN71 531 aa4.77□□□□□ -1.65
PTPN4-203ENST00000430976 PPP5D1E7EU14 171 aa4.77□□□□□ -1.65
PTPN4-203ENST00000430976 GABRA4P48169 554 aa4.77□□□□□ -1.65
PTPN4-203ENST00000430976 SIRPAP78324 504 aa4.77□□□□□ -1.65
PTPN4-203ENST00000430976 TGFBR3Q03167 851 aa4.77□□□□□ -1.65
PTPN4-203ENST00000430976 UBE2V2Q15819 145 aa4.77□□□□□ -1.65
PTPN4-203ENST00000430976 ADIRFQ15847 76 aa4.77□□□□□ -1.65
PTPN4-203ENST00000430976 IAH1Q2TAA2 248 aaPredicted RBP4.77□□□□□ -1.65
PTPN4-203ENST00000430976 HFE2Q6ZVN8 426 aa4.77□□□□□ -1.65
PTPN4-203ENST00000430976 CXorf67Q86X51 503 aaPredicted RBP4.77□□□□□ -1.65
PTPN4-203ENST00000430976 OR2T12Q8NG77 320 aa4.77□□□□□ -1.65
PTPN4-203ENST00000430976 NUDT8Q8WV74 236 aa4.77□□□□□ -1.65
PTPN4-203ENST00000430976 KLK6Q92876 244 aa4.77□□□□□ -1.65
PTPN4-203ENST00000430976 LINC00477Q96M19 166 aa4.77□□□□□ -1.65
PTPN4-203ENST00000430976 SPAG8Q99932 426 aaPredicted RBP4.77□□□□□ -1.65
PTPN4-203ENST00000430976 MRPL45Q9BRJ2 306 aaKnown RBP4.77□□□□□ -1.65
PTPN4-203ENST00000430976 RHNO1Q9BSD3 238 aa4.77□□□□□ -1.65
PTPN4-203ENST00000430976 EIF5A2Q9GZV4 153 aaKnown RBP4.77□□□□□ -1.65
PTPN4-203ENST00000430976 SMG9Q9H0W8 520 aaKnown RBP4.77□□□□□ -1.65
PTPN4-203ENST00000430976 ANXA10Q9UJ72 324 aa4.77□□□□□ -1.65
PTPN4-203ENST00000430976 SCML2Q9UQR0 700 aa4.77□□□□□ -1.65
PTPN4-203ENST00000430976 ST3GAL6Q9Y274 331 aa4.77□□□□□ -1.65
PTPN4-203ENST00000430976 AGLP35573 1532 aa4.77□□□□□ -1.65
PTPN4-203ENST00000430976 CCDC88CQ9P219 2028 aa4.77□□□□□ -1.65
PTPN4-203ENST00000430976 TROQ12816 1431 aaPredicted RBP4.77□□□□□ -1.65
PTPN4-203ENST00000430976 DENND4BO75064 1496 aaPredicted RBP4.77□□□□□ -1.65
PTPN4-203ENST00000430976 IGHV2-70DA0A0C4DH43 119 aa4.77□□□□□ -1.65
PTPN4-203ENST00000430976 OR4C46A6NHA9 309 aa4.77□□□□□ -1.65
PTPN4-203ENST00000430976 LILRA5A6NI73 299 aa4.77□□□□□ -1.65
PTPN4-203ENST00000430976 CLDN24A6NM45 220 aa4.77□□□□□ -1.65
PTPN4-203ENST00000430976 C1QTNF9BB2RNN3 333 aa4.77□□□□□ -1.65
PTPN4-203ENST00000430976 SLC25A12O75746 678 aa4.77□□□□□ -1.65
PTPN4-203ENST00000430976 ELAVL4P26378 380 aaKnown RBP4.77□□□□□ -1.65
PTPN4-203ENST00000430976 NMBRP28336 390 aa4.77□□□□□ -1.65
PTPN4-203ENST00000430976 SRP14P37108 136 aaKnown RBP4.77□□□□□ -1.65
PTPN4-203ENST00000430976 IER3P46695 156 aa4.77□□□□□ -1.65
PTPN4-203ENST00000430976 SULT1A2P50226 295 aa4.77□□□□□ -1.65
PTPN4-203ENST00000430976 SLC7A9P82251 487 aa4.77□□□□□ -1.65
PTPN4-203ENST00000430976 SRSF4Q08170 494 aaKnown RBP4.77□□□□□ -1.65
PTPN4-203ENST00000430976 HIST3H3Q16695 136 aa4.77□□□□□ -1.65
PTPN4-203ENST00000430976 TMEM244Q5VVB8 128 aa4.77□□□□□ -1.65
PTPN4-203ENST00000430976 TMEM215Q68D42 235 aa4.77□□□□□ -1.65
PTPN4-203ENST00000430976 C15orf39Q6ZRI6 1047 aa4.77□□□□□ -1.65
PTPN4-203ENST00000430976 GPC2Q8N158 579 aa4.77□□□□□ -1.65
PTPN4-203ENST00000430976 RAB42Q8N4Z0 105 aa4.77□□□□□ -1.65
PTPN4-203ENST00000430976 BMPERQ8N8U9 685 aa4.77□□□□□ -1.65
PTPN4-203ENST00000430976 OR1S2Q8NGQ3 325 aa4.77□□□□□ -1.65
PTPN4-203ENST00000430976 OR10G6Q8NH81 332 aa4.77□□□□□ -1.65
PTPN4-203ENST00000430976 OR5P2Q8WZ92 322 aa4.77□□□□□ -1.65
PTPN4-203ENST00000430976 PELI1Q96FA3 418 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms