RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 SOCS1O15524 211 aa12.2□□□□□ -0.46
HOXC4-202ENST00000430889 SLC22A5O76082 557 aa12.2□□□□□ -0.46
HOXC4-202ENST00000430889 RGS11O94810 467 aa12.2□□□□□ -0.46
HOXC4-202ENST00000430889 MPIG6BO95866 241 aa12.2□□□□□ -0.46
HOXC4-202ENST00000430889 HPNP05981 417 aa12.2□□□□□ -0.46
HOXC4-202ENST00000430889 FAHP16930 419 aa12.2□□□□□ -0.46
HOXC4-202ENST00000430889 ZNF81P51508 661 aa12.2□□□□□ -0.46
HOXC4-202ENST00000430889 SRSF4Q08170 494 aaKnown RBP12.2□□□□□ -0.46
HOXC4-202ENST00000430889 KISS1Q15726 138 aa12.2□□□□□ -0.46
HOXC4-202ENST00000430889 GFOD2Q3B7J2 385 aa12.2□□□□□ -0.46
HOXC4-202ENST00000430889 LY6G6FQ5SQ64 297 aa12.2□□□□□ -0.46
HOXC4-202ENST00000430889 SPINK14Q6IE38 97 aa12.2□□□□□ -0.46
HOXC4-202ENST00000430889 C1QL2Q7Z5L3 287 aa12.2□□□□□ -0.46
HOXC4-202ENST00000430889 ZDHHC22Q8N966 263 aa12.2□□□□□ -0.46
HOXC4-202ENST00000430889 OR8H1Q8NGG4 311 aa12.2□□□□□ -0.46
HOXC4-202ENST00000430889 SPTSSAQ969W0 71 aa12.2□□□□□ -0.46
HOXC4-202ENST00000430889 CPNE4Q96A23 557 aaPredicted RBP12.2□□□□□ -0.46
HOXC4-202ENST00000430889 SGK3Q96BR1 496 aa12.2□□□□□ -0.46
HOXC4-202ENST00000430889 CYYR1Q96J86 154 aa12.2□□□□□ -0.46
HOXC4-202ENST00000430889 PRRT1Q99946 306 aa12.2□□□□□ -0.46
HOXC4-202ENST00000430889 TMEM59Q9BXS4 323 aa12.2□□□□□ -0.46
HOXC4-202ENST00000430889 AUP1Q9Y679 476 aa12.2□□□□□ -0.46
HOXC4-202ENST00000430889 MED13Q9UHV7 2174 aa12.2□□□□□ -0.46
HOXC4-202ENST00000430889 HMSDA8MTL9 139 aa12.19□□□□□ -0.46
HOXC4-202ENST00000430889 SGCEO43556 437 aa12.19□□□□□ -0.46
HOXC4-202ENST00000430889 TSC22D2O75157 780 aa12.19□□□□□ -0.46
HOXC4-202ENST00000430889 RAD51DO75771 328 aa12.19□□□□□ -0.46
HOXC4-202ENST00000430889 TRAPPC6AO75865 159 aa12.19□□□□□ -0.46
HOXC4-202ENST00000430889 IL2RAP01589 272 aa12.19□□□□□ -0.46
HOXC4-202ENST00000430889 AVPR2P30518 371 aa12.19□□□□□ -0.46
HOXC4-202ENST00000430889 SSTR2P30874 369 aa12.19□□□□□ -0.46
HOXC4-202ENST00000430889 PTGFRP43088 359 aa12.19□□□□□ -0.46
HOXC4-202ENST00000430889 SLC6A9P48067 706 aa12.19□□□□□ -0.46
HOXC4-202ENST00000430889 LHX2P50458 406 aa12.19□□□□□ -0.46
HOXC4-202ENST00000430889 UBE2MP61081 183 aaKnown RBP12.19□□□□□ -0.46
HOXC4-202ENST00000430889 RPS27AP62979 156 aaKnown RBP12.19□□□□□ -0.46
HOXC4-202ENST00000430889 OC90Q02509 493 aaPredicted RBP12.19□□□□□ -0.46
HOXC4-202ENST00000430889 PNLIPRP3Q17RR3 467 aa12.19□□□□□ -0.46
HOXC4-202ENST00000430889 RNASE10Q5GAN6 216 aaKnown RBP12.19□□□□□ -0.46
HOXC4-202ENST00000430889 DCAF10Q5QP82 559 aa12.19□□□□□ -0.46
HOXC4-202ENST00000430889 OR52W1Q6IF63 320 aa12.19□□□□□ -0.46
HOXC4-202ENST00000430889 SLC25A42Q86VD7 318 aa12.19□□□□□ -0.46
HOXC4-202ENST00000430889 OR52H1Q8NGJ2 320 aa12.19□□□□□ -0.46
HOXC4-202ENST00000430889 OR1F12Q8NHA8 337 aa12.19□□□□□ -0.46
HOXC4-202ENST00000430889 ZNF845Q96IR2 970 aaPredicted RBP12.19□□□□□ -0.46
HOXC4-202ENST00000430889 TM2D1Q9BX74 207 aa12.19□□□□□ -0.46
HOXC4-202ENST00000430889 OR10A2Q9H208 303 aa12.19□□□□□ -0.46
HOXC4-202ENST00000430889 BANF2Q9H503 90 aa12.19□□□□□ -0.46
HOXC4-202ENST00000430889 GPR35Q9HC97 309 aa12.19□□□□□ -0.46
HOXC4-202ENST00000430889 CNTRLQ7Z7A1 2325 aa12.19□□□□□ -0.46
HOXC4-202ENST00000430889 RPS10-NUDT3A0A1W2PQS6 291 aa12.19□□□□□ -0.46
HOXC4-202ENST00000430889 LINC00862A6NCI5 91 aa12.19□□□□□ -0.46
HOXC4-202ENST00000430889 MCRIP1C9JLW8 97 aa12.19□□□□□ -0.46
HOXC4-202ENST00000430889 F5H5P2 479 aa12.19□□□□□ -0.46
HOXC4-202ENST00000430889 GOSR2O14653 212 aa12.19□□□□□ -0.46
HOXC4-202ENST00000430889 SNAPC5O75971 98 aa12.19□□□□□ -0.46
HOXC4-202ENST00000430889 SIX6O95475 246 aa12.19□□□□□ -0.46
HOXC4-202ENST00000430889 F10P00742 488 aa12.19□□□□□ -0.46
HOXC4-202ENST00000430889 ZNF35P13682 527 aa12.19□□□□□ -0.46
HOXC4-202ENST00000430889 ZBTB25P24278 435 aa12.19□□□□□ -0.46
HOXC4-202ENST00000430889 ACKR3P25106 362 aa12.19□□□□□ -0.46
HOXC4-202ENST00000430889 HRH1P35367 487 aa12.19□□□□□ -0.46
HOXC4-202ENST00000430889 GNG2P59768 71 aa12.19□□□□□ -0.46
HOXC4-202ENST00000430889 SCRN3Q0VDG4 424 aa12.19□□□□□ -0.46
HOXC4-202ENST00000430889 GRK1Q15835 563 aa12.19□□□□□ -0.46
HOXC4-202ENST00000430889 FAM189A2Q15884 450 aa12.19□□□□□ -0.46
HOXC4-202ENST00000430889 RSPO4Q2I0M5 234 aaPredicted RBP12.19□□□□□ -0.46
HOXC4-202ENST00000430889 ZNF774Q6NX45 483 aa12.19□□□□□ -0.46
HOXC4-202ENST00000430889 CHMP1BQ7LBR1 199 aa12.19□□□□□ -0.46
HOXC4-202ENST00000430889 OR56B1Q8NGI3 324 aa12.19□□□□□ -0.46
HOXC4-202ENST00000430889 HAS2Q92819 552 aa12.19□□□□□ -0.46
HOXC4-202ENST00000430889 RAB3CQ96E17 227 aa12.19□□□□□ -0.46
HOXC4-202ENST00000430889 ALKBH3Q96Q83 286 aaPredicted RBP12.19□□□□□ -0.46
HOXC4-202ENST00000430889 FOXB1Q99853 325 aa12.19□□□□□ -0.46
HOXC4-202ENST00000430889 OCSTAMPQ9BR26 566 aa12.19□□□□□ -0.46
HOXC4-202ENST00000430889 WNT5BQ9H1J7 359 aa12.19□□□□□ -0.46
HOXC4-202ENST00000430889 FN3KRPQ9HA64 309 aa12.19□□□□□ -0.46
HOXC4-202ENST00000430889 PIGLQ9Y2B2 252 aa12.19□□□□□ -0.46
HOXC4-202ENST00000430889 R4GN57 208 aa12.19□□□□□ -0.46
HOXC4-202ENST00000430889 BDP1A6H8Y1 2624 aa12.18□□□□□ -0.46
HOXC4-202ENST00000430889 OR2AT4A6NND4 320 aa12.18□□□□□ -0.46
HOXC4-202ENST00000430889 CEACAM18A8MTB9 384 aa12.18□□□□□ -0.46
HOXC4-202ENST00000430889 MTRF1O75570 445 aaKnown RBP12.18□□□□□ -0.46
HOXC4-202ENST00000430889 CFDP00746 253 aaPredicted RBP12.18□□□□□ -0.46
HOXC4-202ENST00000430889 ZNF806P0C7X5 589 aa12.18□□□□□ -0.46
HOXC4-202ENST00000430889 ZNF32P17041 273 aa12.18□□□□□ -0.46
HOXC4-202ENST00000430889 CLDN18P56856 261 aa12.18□□□□□ -0.46
HOXC4-202ENST00000430889 CXADRP78310 365 aa12.18□□□□□ -0.46
HOXC4-202ENST00000430889 DHRS2Q13268 280 aa12.18□□□□□ -0.46
HOXC4-202ENST00000430889 CEACAM16Q2WEN9 425 aa12.18□□□□□ -0.46
HOXC4-202ENST00000430889 NRN1LQ496H8 165 aa12.18□□□□□ -0.46
HOXC4-202ENST00000430889 C4orf46Q504U0 113 aa12.18□□□□□ -0.46
HOXC4-202ENST00000430889 VAX1Q5SQQ9 334 aa12.18□□□□□ -0.46
HOXC4-202ENST00000430889 SFRP5Q5T4F7 317 aa12.18□□□□□ -0.46
HOXC4-202ENST00000430889 TMEM164Q5U3C3 297 aa12.18□□□□□ -0.46
HOXC4-202ENST00000430889 TMEM42Q69YG0 159 aa12.18□□□□□ -0.46
HOXC4-202ENST00000430889 SULF2Q8IWU5 870 aa12.18□□□□□ -0.46
HOXC4-202ENST00000430889 C12orf45Q8N5I9 185 aaPredicted RBP12.18□□□□□ -0.46
HOXC4-202ENST00000430889 FGFBP3Q8TAT2 258 aa12.18□□□□□ -0.46
HOXC4-202ENST00000430889 ABHD3Q8WU67 409 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms