RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 GVQW1Q8N7I0 195 aa12.02□□□□□ -0.48
THBS3-202ENST00000428962 TMEM104Q8NE00 496 aa12.02□□□□□ -0.48
THBS3-202ENST00000428962 OR5M8Q8NGP6 311 aa12.02□□□□□ -0.48
THBS3-202ENST00000428962 ANGPTL6Q8NI99 470 aa12.02□□□□□ -0.48
THBS3-202ENST00000428962 CPNE2Q96FN4 548 aaPredicted RBP12.02□□□□□ -0.48
THBS3-202ENST00000428962 LYZL4Q96KX0 146 aa12.02□□□□□ -0.48
THBS3-202ENST00000428962 GSX2Q9BZM3 304 aa12.02□□□□□ -0.48
THBS3-202ENST00000428962 VSIG4Q9Y279 399 aa12.02□□□□□ -0.48
THBS3-202ENST00000428962 KCNK7Q9Y2U2 307 aa12.02□□□□□ -0.48
THBS3-202ENST00000428962 NOP16Q9Y3C1 178 aaKnown RBP12.02□□□□□ -0.48
THBS3-202ENST00000428962 PCDHGA1Q9Y5H4 931 aa12.02□□□□□ -0.48
THBS3-202ENST00000428962 USP34Q70CQ2 3546 aa12.02□□□□□ -0.49
THBS3-202ENST00000428962 IGKV1-9A0A0C4DH69 117 aa12.02□□□□□ -0.49
THBS3-202ENST00000428962 A0A0G2JMM0 328 aa12.02□□□□□ -0.49
THBS3-202ENST00000428962 A0A1W2PPB8 328 aa12.02□□□□□ -0.49
THBS3-202ENST00000428962 RPS10-NUDT3A0A1W2PQS6 291 aa12.02□□□□□ -0.49
THBS3-202ENST00000428962 A0A1W2PRS3 328 aa12.02□□□□□ -0.49
THBS3-202ENST00000428962 LRRC3CA6NJW4 275 aa12.02□□□□□ -0.49
THBS3-202ENST00000428962 RFPL4AA6NLU0 287 aa12.02□□□□□ -0.49
THBS3-202ENST00000428962 DHRS7CA6NNS2 312 aa12.02□□□□□ -0.49
THBS3-202ENST00000428962 KIR3DP1A8MWS1 328 aa12.02□□□□□ -0.49
THBS3-202ENST00000428962 RFPL4AL1F8VTS6 287 aa12.02□□□□□ -0.49
THBS3-202ENST00000428962 MASP2O00187 686 aa12.02□□□□□ -0.49
THBS3-202ENST00000428962 SSX5O60225 188 aa12.02□□□□□ -0.49
THBS3-202ENST00000428962 CST2P09228 141 aa12.02□□□□□ -0.49
THBS3-202ENST00000428962 NAT1P18440 290 aa12.02□□□□□ -0.49
THBS3-202ENST00000428962 CD96P40200 585 aa12.02□□□□□ -0.49
THBS3-202ENST00000428962 OC90Q02509 493 aaPredicted RBP12.02□□□□□ -0.49
THBS3-202ENST00000428962 SCRN3Q0VDG4 424 aa12.02□□□□□ -0.49
THBS3-202ENST00000428962 KISS1Q15726 138 aa12.02□□□□□ -0.49
THBS3-202ENST00000428962 B3GNTL1Q67FW5 361 aaPredicted RBP12.02□□□□□ -0.49
THBS3-202ENST00000428962 ABLIM2Q6H8Q1 611 aa12.02□□□□□ -0.49
THBS3-202ENST00000428962 OR52W1Q6IF63 320 aa12.02□□□□□ -0.49
THBS3-202ENST00000428962 DRAM2Q6UX65 266 aa12.02□□□□□ -0.49
THBS3-202ENST00000428962 TMUB2Q71RG4 321 aa12.02□□□□□ -0.49
THBS3-202ENST00000428962 GGNQ86UU5 652 aa12.02□□□□□ -0.49
THBS3-202ENST00000428962 OR4K15Q8NH41 348 aa12.02□□□□□ -0.49
THBS3-202ENST00000428962 OR2V1Q8NHB1 315 aa12.02□□□□□ -0.49
THBS3-202ENST00000428962 CPT1CQ8TCG5 803 aa12.02□□□□□ -0.49
THBS3-202ENST00000428962 MARVELD3Q96A59 401 aa12.02□□□□□ -0.49
THBS3-202ENST00000428962 S100A13Q99584 98 aa12.02□□□□□ -0.49
THBS3-202ENST00000428962 P4HTMQ9NXG6 502 aa12.02□□□□□ -0.49
THBS3-202ENST00000428962 KIF25Q9UIL4 384 aa12.02□□□□□ -0.49
THBS3-202ENST00000428962 A0A0A6YYD4 124 aa12.01□□□□□ -0.49
THBS3-202ENST00000428962 LINC01387J3KSC0 135 aa12.01□□□□□ -0.49
THBS3-202ENST00000428962 SGCEO43556 437 aa12.01□□□□□ -0.49
THBS3-202ENST00000428962 CFDP00746 253 aaPredicted RBP12.01□□□□□ -0.49
THBS3-202ENST00000428962 IL2RAP01589 272 aa12.01□□□□□ -0.49
THBS3-202ENST00000428962 RPA2P15927 270 aa12.01□□□□□ -0.49
THBS3-202ENST00000428962 POU3F2P20265 443 aaPredicted RBP12.01□□□□□ -0.49
THBS3-202ENST00000428962 PTGFRP43088 359 aa12.01□□□□□ -0.49
THBS3-202ENST00000428962 RPS27AP62979 156 aaKnown RBP12.01□□□□□ -0.49
THBS3-202ENST00000428962 SRSF4Q08170 494 aaKnown RBP12.01□□□□□ -0.49
THBS3-202ENST00000428962 VAX1Q5SQQ9 334 aa12.01□□□□□ -0.49
THBS3-202ENST00000428962 PDSS1Q5T2R2 415 aa12.01□□□□□ -0.49
THBS3-202ENST00000428962 RTL6Q6ICC9 239 aa12.01□□□□□ -0.49
THBS3-202ENST00000428962 TCEAL6Q6IPX3 200 aa12.01□□□□□ -0.49
THBS3-202ENST00000428962 AAED1Q7RTV5 226 aa12.01□□□□□ -0.49
THBS3-202ENST00000428962 TIPARPQ7Z3E1 657 aaKnown RBP12.01□□□□□ -0.49
THBS3-202ENST00000428962 ARRDC1Q8N5I2 433 aa12.01□□□□□ -0.49
THBS3-202ENST00000428962 TCEAL3Q969E4 200 aa12.01□□□□□ -0.49
THBS3-202ENST00000428962 BANF2Q9H503 90 aa12.01□□□□□ -0.49
THBS3-202ENST00000428962 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.01□□□□□ -0.49
THBS3-202ENST00000428962 BOKQ9UMX3 212 aaPredicted RBP12.01□□□□□ -0.49
THBS3-202ENST00000428962 PIGLQ9Y2B2 252 aa12.01□□□□□ -0.49
THBS3-202ENST00000428962 ZNF716A6NP11 495 aa12□□□□□ -0.49
THBS3-202ENST00000428962 MFNGO00587 321 aa12□□□□□ -0.49
THBS3-202ENST00000428962 SOCS1O15524 211 aa12□□□□□ -0.49
THBS3-202ENST00000428962 TRAPPC6AO75865 159 aa12□□□□□ -0.49
THBS3-202ENST00000428962 CD8AP01732 235 aa12□□□□□ -0.49
THBS3-202ENST00000428962 ANOS1P23352 680 aa12□□□□□ -0.49
THBS3-202ENST00000428962 ZBTB25P24278 435 aa12□□□□□ -0.49
THBS3-202ENST00000428962 GDF1P27539 372 aa12□□□□□ -0.49
THBS3-202ENST00000428962 P2RX3P56373 397 aa12□□□□□ -0.49
THBS3-202ENST00000428962 SORDQ00796 357 aa12□□□□□ -0.49
THBS3-202ENST00000428962 HLXQ14774 488 aaPredicted RBP12□□□□□ -0.49
THBS3-202ENST00000428962 SLC22A6Q4U2R8 563 aa12□□□□□ -0.49
THBS3-202ENST00000428962 PLAC9Q5JTB6 97 aa12□□□□□ -0.49
THBS3-202ENST00000428962 LY6G6FQ5SQ64 297 aa12□□□□□ -0.49
THBS3-202ENST00000428962 JMJD6Q6NYC1 403 aaPredicted RBP12□□□□□ -0.49
THBS3-202ENST00000428962 OR51T1Q8NGJ9 327 aa12□□□□□ -0.49
THBS3-202ENST00000428962 HAS2Q92819 552 aa12□□□□□ -0.49
THBS3-202ENST00000428962 CPNE4Q96A23 557 aaPredicted RBP12□□□□□ -0.49
THBS3-202ENST00000428962 FBXO17Q96EF6 278 aa12□□□□□ -0.49
THBS3-202ENST00000428962 WDR89Q96FK6 387 aaPredicted RBP12□□□□□ -0.49
THBS3-202ENST00000428962 LIN37Q96GY3 246 aaPredicted RBP12□□□□□ -0.49
THBS3-202ENST00000428962 PHB2Q99623 299 aa12□□□□□ -0.49
THBS3-202ENST00000428962 OCSTAMPQ9BR26 566 aa12□□□□□ -0.49
THBS3-202ENST00000428962 ARL6Q9H0F7 186 aa12□□□□□ -0.49
THBS3-202ENST00000428962 ARRDC1-AS1Q9H2J1 176 aa12□□□□□ -0.49
THBS3-202ENST00000428962 TMEM38BQ9NVV0 291 aa12□□□□□ -0.49
THBS3-202ENST00000428962 COMMD9Q9P000 198 aa12□□□□□ -0.49
THBS3-202ENST00000428962 E9PLN8 166 aa12□□□□□ -0.49
THBS3-202ENST00000428962 CXCL13O43927 109 aa12□□□□□ -0.49
THBS3-202ENST00000428962 B3GALNT1O75752 331 aa12□□□□□ -0.49
THBS3-202ENST00000428962 NAT2P11245 290 aa12□□□□□ -0.49
THBS3-202ENST00000428962 FAHP16930 419 aa12□□□□□ -0.49
THBS3-202ENST00000428962 HLA-GP17693 338 aa12□□□□□ -0.49
THBS3-202ENST00000428962 CNR1P21554 472 aa12□□□□□ -0.49
THBS3-202ENST00000428962 CRYGSP22914 178 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms