RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 SMIM19Q96E16 107 aa10.12□□□□□ -0.79
CECR3-201ENST00000428828 RHOVQ96L33 236 aa10.12□□□□□ -0.79
CECR3-201ENST00000428828 C5orf34Q96MH7 638 aa10.12□□□□□ -0.79
CECR3-201ENST00000428828 NOL4LQ96MY1 436 aaPredicted RBP10.12□□□□□ -0.79
CECR3-201ENST00000428828 CNTNAP3Q9BZ76 1288 aa10.12□□□□□ -0.79
CECR3-201ENST00000428828 LAT2Q9GZY6 243 aa10.12□□□□□ -0.79
CECR3-201ENST00000428828 SH2D2AQ9NP31 389 aa10.12□□□□□ -0.79
CECR3-201ENST00000428828 KLHL28Q9NXS3 571 aa10.12□□□□□ -0.79
CECR3-201ENST00000428828 DNAJB12Q9NXW2 375 aaKnown RBP10.12□□□□□ -0.79
CECR3-201ENST00000428828 PKD1L2Q7Z442 2459 aa10.12□□□□□ -0.79
CECR3-201ENST00000428828 ELOA3CA0A087WX78 387 aaPredicted RBP10.11□□□□□ -0.79
CECR3-201ENST00000428828 A0A1W2PQD3 144 aa10.11□□□□□ -0.79
CECR3-201ENST00000428828 ZNF705EA8MWA4 302 aaPredicted RBP10.11□□□□□ -0.79
CECR3-201ENST00000428828 MAGEB4O15481 346 aaPredicted RBP10.11□□□□□ -0.79
CECR3-201ENST00000428828 NGFRP08138 427 aa10.11□□□□□ -0.79
CECR3-201ENST00000428828 HCKP08631 526 aa10.11□□□□□ -0.79
CECR3-201ENST00000428828 DVL1P1P54792 670 aaPredicted RBP10.11□□□□□ -0.79
CECR3-201ENST00000428828 RAP1AP62834 184 aa10.11□□□□□ -0.79
CECR3-201ENST00000428828 POU4F2Q12837 409 aa10.11□□□□□ -0.79
CECR3-201ENST00000428828 RNASE10Q5GAN6 216 aaKnown RBP10.11□□□□□ -0.79
CECR3-201ENST00000428828 LIPNQ5VXI9 398 aa10.11□□□□□ -0.79
CECR3-201ENST00000428828 GALNTL5Q7Z4T8 443 aa10.11□□□□□ -0.79
CECR3-201ENST00000428828 CPOQ8IVL8 374 aa10.11□□□□□ -0.79
CECR3-201ENST00000428828 ZADH2Q8N4Q0 377 aa10.11□□□□□ -0.79
CECR3-201ENST00000428828 BOLLQ8N9W6 283 aaKnown RBP10.11□□□□□ -0.79
CECR3-201ENST00000428828 MDS2Q8NDY4 140 aa10.11□□□□□ -0.79
CECR3-201ENST00000428828 STEAP2Q8NFT2 490 aa10.11□□□□□ -0.79
CECR3-201ENST00000428828 OR4C16Q8NGL9 310 aa10.11□□□□□ -0.79
CECR3-201ENST00000428828 HAS2Q92819 552 aa10.11□□□□□ -0.79
CECR3-201ENST00000428828 KISS1RQ969F8 398 aaPredicted RBP10.11□□□□□ -0.79
CECR3-201ENST00000428828 S100PBPQ96BU1 408 aa10.11□□□□□ -0.79
CECR3-201ENST00000428828 KLHDC3Q9BQ90 382 aa10.11□□□□□ -0.79
CECR3-201ENST00000428828 PROK2Q9HC23 129 aa10.11□□□□□ -0.79
CECR3-201ENST00000428828 ZNF71Q9NQZ8 489 aaPredicted RBP10.11□□□□□ -0.79
CECR3-201ENST00000428828 DEPPQ9NTK1 212 aa10.11□□□□□ -0.79
CECR3-201ENST00000428828 CNIH4Q9P003 139 aa10.11□□□□□ -0.79
CECR3-201ENST00000428828 MOKQ9UQ07 419 aa10.11□□□□□ -0.79
CECR3-201ENST00000428828 ZNF337Q9Y3M9 751 aa10.11□□□□□ -0.79
CECR3-201ENST00000428828 FLVCR1Q9Y5Y0 555 aa10.11□□□□□ -0.79
CECR3-201ENST00000428828 PRRC2CQ9Y520 2896 aaKnown RBP10.11□□□□□ -0.79
CECR3-201ENST00000428828 PINLYPA6NC86 204 aa10.11□□□□□ -0.79
CECR3-201ENST00000428828 IFITM10A6NMD0 228 aa10.11□□□□□ -0.79
CECR3-201ENST00000428828 MARCH11A6NNE9 402 aa10.11□□□□□ -0.79
CECR3-201ENST00000428828 CDC40O60508 579 aaKnown RBP eCLIP10.11□□□□□ -0.79
CECR3-201ENST00000428828 FARS2O95363 451 aaKnown RBP10.11□□□□□ -0.79
CECR3-201ENST00000428828 SP1P08047 785 aa10.11□□□□□ -0.79
CECR3-201ENST00000428828 FCGR3AP08637 254 aa10.11□□□□□ -0.79
CECR3-201ENST00000428828 OR4E1P0C645 316 aa10.11□□□□□ -0.79
CECR3-201ENST00000428828 RD3LP0DJH9 198 aa10.11□□□□□ -0.79
CECR3-201ENST00000428828 CD46P15529 392 aa10.11□□□□□ -0.79
CECR3-201ENST00000428828 TNFSF10P50591 281 aa10.11□□□□□ -0.79
CECR3-201ENST00000428828 CASP6P55212 293 aa10.11□□□□□ -0.79
CECR3-201ENST00000428828 SKP2Q13309 424 aa10.11□□□□□ -0.79
CECR3-201ENST00000428828 RBM39Q14498 530 aaKnown RBP10.11□□□□□ -0.79
CECR3-201ENST00000428828 ZNF766Q5HY98 468 aa10.11□□□□□ -0.79
CECR3-201ENST00000428828 EIF5AL1Q6IS14 154 aaKnown RBP10.11□□□□□ -0.79
CECR3-201ENST00000428828 IGFL2Q6UWQ7 119 aa10.11□□□□□ -0.79
CECR3-201ENST00000428828 ETV3LQ6ZN32 361 aa10.11□□□□□ -0.79
CECR3-201ENST00000428828 SSX6Q7RTT6 188 aa10.11□□□□□ -0.79
CECR3-201ENST00000428828 DCXRQ7Z4W1 244 aa10.11□□□□□ -0.79
CECR3-201ENST00000428828 TGIF2LXQ8IUE1 241 aa10.11□□□□□ -0.79
CECR3-201ENST00000428828 PAQR4Q8N4S7 273 aaPredicted RBP10.11□□□□□ -0.79
CECR3-201ENST00000428828 OR1J2Q8NGS2 313 aa10.11□□□□□ -0.79
CECR3-201ENST00000428828 SNX33Q8WV41 574 aa10.11□□□□□ -0.79
CECR3-201ENST00000428828 FBXO17Q96EF6 278 aa10.11□□□□□ -0.79
CECR3-201ENST00000428828 MISP3Q96FF7 219 aa10.11□□□□□ -0.79
CECR3-201ENST00000428828 ARHGDIGQ99819 225 aa10.11□□□□□ -0.79
CECR3-201ENST00000428828 ANGPTL4Q9BY76 406 aa10.11□□□□□ -0.79
CECR3-201ENST00000428828 SYT4Q9H2B2 425 aa10.11□□□□□ -0.79
CECR3-201ENST00000428828 IL20RAQ9UHF4 553 aa10.11□□□□□ -0.79
CECR3-201ENST00000428828 LHX6Q9UPM6 363 aa10.11□□□□□ -0.79
CECR3-201ENST00000428828 NTNG1Q9Y2I2 539 aa10.11□□□□□ -0.79
CECR3-201ENST00000428828 USP24Q9UPU5 2620 aa10.1□□□□□ -0.79
CECR3-201ENST00000428828 CPSF4LA6NMK7 179 aaKnown RBP10.1□□□□□ -0.79
CECR3-201ENST00000428828 XRCC3O43542 346 aa10.1□□□□□ -0.79
CECR3-201ENST00000428828 C17orf67Q0P5P2 114 aa10.1□□□□□ -0.79
CECR3-201ENST00000428828 ST3GAL3Q11203 375 aa10.1□□□□□ -0.79
CECR3-201ENST00000428828 CDK5R1Q15078 307 aa10.1□□□□□ -0.79
CECR3-201ENST00000428828 HIST2H3PS2Q5TEC6 136 aa10.1□□□□□ -0.79
CECR3-201ENST00000428828 ALKBH2Q6NS38 261 aa10.1□□□□□ -0.79
CECR3-201ENST00000428828 SULF2Q8IWU5 870 aa10.1□□□□□ -0.79
CECR3-201ENST00000428828 COMMD1Q8N668 190 aa10.1□□□□□ -0.79
CECR3-201ENST00000428828 OR4K17Q8NGC6 315 aa10.1□□□□□ -0.79
CECR3-201ENST00000428828 SYNPRQ8TBG9 265 aa10.1□□□□□ -0.79
CECR3-201ENST00000428828 C4orf36Q96KX1 117 aa10.1□□□□□ -0.79
CECR3-201ENST00000428828 PRORYQ9H606 182 aa10.1□□□□□ -0.79
CECR3-201ENST00000428828 EXO5Q9H790 373 aa10.1□□□□□ -0.79
CECR3-201ENST00000428828 LUZP4Q9P127 313 aa10.1□□□□□ -0.79
CECR3-201ENST00000428828 ZNF107Q9UII5 783 aaPredicted RBP10.1□□□□□ -0.79
CECR3-201ENST00000428828 GDF2Q9UK05 429 aaPredicted RBP10.1□□□□□ -0.79
CECR3-201ENST00000428828 A6NLC8 198 aa10.09□□□□□ -0.79
CECR3-201ENST00000428828 NME2P1O60361 137 aa10.09□□□□□ -0.79
CECR3-201ENST00000428828 CRTAPO75718 401 aaPredicted RBP10.09□□□□□ -0.79
CECR3-201ENST00000428828 NME2P22392 152 aa10.09□□□□□ -0.79
CECR3-201ENST00000428828 CDK2P24941 298 aa10.09□□□□□ -0.79
CECR3-201ENST00000428828 MPZP25189 248 aa10.09□□□□□ -0.79
CECR3-201ENST00000428828 ADH7P40394 386 aa10.09□□□□□ -0.79
CECR3-201ENST00000428828 MEOX1P50221 254 aa10.09□□□□□ -0.79
CECR3-201ENST00000428828 RPS11P62280 158 aaKnown RBP eCLIP10.09□□□□□ -0.79
CECR3-201ENST00000428828 ACTA2P62736 377 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms